RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 UIMC1Q96RL1 719 aa8.6□□□□□ -1.03
YBX3-204ENST00000366290 FTOQ9C0B1 505 aaKnown RBP eCLIP8.6□□□□□ -1.03
YBX3-204ENST00000366290 KCNMB3Q9NPA1 279 aa8.6□□□□□ -1.03
YBX3-204ENST00000366290 ANLNQ9NQW6 1124 aa8.6□□□□□ -1.03
YBX3-204ENST00000366290 ZNF302Q9NR11 478 aa8.6□□□□□ -1.03
YBX3-204ENST00000366290 RBM12Q9NTZ6 932 aaKnown RBP8.6□□□□□ -1.03
YBX3-204ENST00000366290 RAPGEFL1Q9UHV5 662 aa8.6□□□□□ -1.03
YBX3-204ENST00000366290 PRRC2BQ5JSZ5 2229 aaKnown RBP8.6□□□□□ -1.03
YBX3-204ENST00000366290 COL4A6Q14031 1691 aa8.59□□□□□ -1.03
YBX3-204ENST00000366290 KDM3AQ9Y4C1 1321 aa8.59□□□□□ -1.03
YBX3-204ENST00000366290 SMIM35A0A1B0GVV1 85 aa8.59□□□□□ -1.03
YBX3-204ENST00000366290 TBX3O15119 743 aa8.59□□□□□ -1.03
YBX3-204ENST00000366290 NUAK1O60285 661 aa8.59□□□□□ -1.03
YBX3-204ENST00000366290 POU2F2P09086 479 aa8.59□□□□□ -1.03
YBX3-204ENST00000366290 CTSSP25774 331 aa8.59□□□□□ -1.03
YBX3-204ENST00000366290 WASP42768 502 aa8.59□□□□□ -1.03
YBX3-204ENST00000366290 JAK3P52333 1124 aa8.59□□□□□ -1.03
YBX3-204ENST00000366290 GFOD2Q3B7J2 385 aa8.59□□□□□ -1.03
YBX3-204ENST00000366290 MINDY4Q4G0A6 757 aa8.59□□□□□ -1.03
YBX3-204ENST00000366290 AGBL4Q5VU57 503 aa8.59□□□□□ -1.03
YBX3-204ENST00000366290 LRCH2Q5VUJ6 765 aa8.59□□□□□ -1.03
YBX3-204ENST00000366290 SWSAP1Q6NVH7 229 aa8.59□□□□□ -1.03
YBX3-204ENST00000366290 FAM173BQ6P4H8 233 aa8.59□□□□□ -1.03
YBX3-204ENST00000366290 MTHFD1LQ6UB35 978 aa8.59□□□□□ -1.03
YBX3-204ENST00000366290 HERC6Q8IVU3 1022 aa8.59□□□□□ -1.03
YBX3-204ENST00000366290 NME8Q8N427 588 aa8.59□□□□□ -1.03
YBX3-204ENST00000366290 APBB2Q92870 758 aa8.59□□□□□ -1.03
YBX3-204ENST00000366290 MBD6Q96DN6 1003 aa8.59□□□□□ -1.03
YBX3-204ENST00000366290 LCORQ96JN0 433 aaPredicted RBP8.59□□□□□ -1.03
YBX3-204ENST00000366290 FAM20AQ96MK3 541 aa8.59□□□□□ -1.03
YBX3-204ENST00000366290 NAP1L4Q99733 375 aaKnown RBP8.59□□□□□ -1.03
YBX3-204ENST00000366290 GTPBP4Q9BZE4 634 aaKnown RBP8.59□□□□□ -1.03
YBX3-204ENST00000366290 TMEM60Q9H2L4 133 aa8.59□□□□□ -1.03
YBX3-204ENST00000366290 C2orf78A6NCI8 922 aa8.58□□□□□ -1.04
YBX3-204ENST00000366290 CCDC154A6NI56 674 aa8.58□□□□□ -1.04
YBX3-204ENST00000366290 DDX39AO00148 427 aaKnown RBP8.58□□□□□ -1.04
YBX3-204ENST00000366290 PRAMEF4O60810 478 aa8.58□□□□□ -1.04
YBX3-204ENST00000366290 OFD1O75665 1012 aa8.58□□□□□ -1.04
YBX3-204ENST00000366290 GJB5O95377 273 aa8.58□□□□□ -1.04
YBX3-204ENST00000366290 ZSCAN22P10073 491 aaPredicted RBP8.58□□□□□ -1.04
YBX3-204ENST00000366290 MYOGP15173 224 aa8.58□□□□□ -1.04
YBX3-204ENST00000366290 TRAPPC10P48553 1259 aa8.58□□□□□ -1.04
YBX3-204ENST00000366290 MRPS6P82932 125 aaKnown RBP8.58□□□□□ -1.04
YBX3-204ENST00000366290 PPP2R5CQ13362 524 aa8.58□□□□□ -1.04
YBX3-204ENST00000366290 LETM2Q2VYF4 491 aa8.58□□□□□ -1.04
YBX3-204ENST00000366290 ZMAT1Q5H9K5 638 aa8.58□□□□□ -1.04
YBX3-204ENST00000366290 ZNF484Q5JVG2 852 aa8.58□□□□□ -1.04
YBX3-204ENST00000366290 FBXO47Q5MNV8 452 aa8.58□□□□□ -1.04
YBX3-204ENST00000366290 LCE1DQ5T752 114 aa8.58□□□□□ -1.04
YBX3-204ENST00000366290 TCERG1LQ5VWI1 586 aa8.58□□□□□ -1.04
YBX3-204ENST00000366290 LILRA6Q6PI73 481 aa8.58□□□□□ -1.04
YBX3-204ENST00000366290 C4orf32Q8N8J7 132 aa8.58□□□□□ -1.04
YBX3-204ENST00000366290 GPR156Q8NFN8 814 aa8.58□□□□□ -1.04
YBX3-204ENST00000366290 DBF4BQ8NFT6 615 aa8.58□□□□□ -1.04
YBX3-204ENST00000366290 DNAJB3Q8WWF6 145 aa8.58□□□□□ -1.04
YBX3-204ENST00000366290 PPM1EQ8WY54 764 aa8.58□□□□□ -1.04
YBX3-204ENST00000366290 SEPT8Q92599 483 aa8.58□□□□□ -1.04
YBX3-204ENST00000366290 HAS1Q92839 578 aa8.58□□□□□ -1.04
YBX3-204ENST00000366290 GJA10Q969M2 543 aa8.58□□□□□ -1.04
YBX3-204ENST00000366290 FAM167AQ96KS9 214 aa8.58□□□□□ -1.04
YBX3-204ENST00000366290 ASB2Q96Q27 587 aa8.58□□□□□ -1.04
YBX3-204ENST00000366290 OR10A2Q9H208 303 aa8.58□□□□□ -1.04
YBX3-204ENST00000366290 UNC45AQ9H3U1 944 aa8.58□□□□□ -1.04
YBX3-204ENST00000366290 DDX25Q9UHL0 483 aaKnown RBP8.58□□□□□ -1.04
YBX3-204ENST00000366290 INTUQ9ULD6 942 aa8.58□□□□□ -1.04
YBX3-204ENST00000366290 IPPQ9Y573 584 aa8.58□□□□□ -1.04
YBX3-204ENST00000366290 VSTM5A8MXK1 200 aa8.57□□□□□ -1.04
YBX3-204ENST00000366290 MAGEB2O15479 319 aa8.57□□□□□ -1.04
YBX3-204ENST00000366290 HTRA2O43464 458 aaPredicted RBP8.57□□□□□ -1.04
YBX3-204ENST00000366290 AKR1B10O60218 316 aa8.57□□□□□ -1.04
YBX3-204ENST00000366290 CCNT1O60563 726 aaKnown RBP8.57□□□□□ -1.04
YBX3-204ENST00000366290 STBD1O95210 358 aa8.57□□□□□ -1.04
YBX3-204ENST00000366290 C22orf31O95567 290 aa8.57□□□□□ -1.04
YBX3-204ENST00000366290 KLRC1P26715 233 aa8.57□□□□□ -1.04
YBX3-204ENST00000366290 RABGGTBP53611 331 aa8.57□□□□□ -1.04
YBX3-204ENST00000366290 TBX4P57082 545 aa8.57□□□□□ -1.04
YBX3-204ENST00000366290 DEFB103AP81534 67 aa8.57□□□□□ -1.04
YBX3-204ENST00000366290 HTRA4P83105 476 aaPredicted RBP8.57□□□□□ -1.04
YBX3-204ENST00000366290 MGAT2Q10469 447 aa8.57□□□□□ -1.04
YBX3-204ENST00000366290 LPIN1Q14693 890 aa8.57□□□□□ -1.04
YBX3-204ENST00000366290 NOMO1Q15155 1222 aa8.57□□□□□ -1.04
YBX3-204ENST00000366290 TSHZ1Q6ZSZ6 1077 aa8.57□□□□□ -1.04
YBX3-204ENST00000366290 TAS1R1Q7RTX1 841 aa8.57□□□□□ -1.04
YBX3-204ENST00000366290 KIAA0319LQ8IZA0 1049 aa8.57□□□□□ -1.04
YBX3-204ENST00000366290 LINC01465Q8N7H1 131 aa8.57□□□□□ -1.04
YBX3-204ENST00000366290 SNX33Q8WV41 574 aa8.57□□□□□ -1.04
YBX3-204ENST00000366290 TRAPPC12Q8WVT3 735 aa8.57□□□□□ -1.04
YBX3-204ENST00000366290 ATXN2LQ8WWM7 1075 aaKnown RBP8.57□□□□□ -1.04
YBX3-204ENST00000366290 GCDHQ92947 438 aaPredicted RBP8.57□□□□□ -1.04
YBX3-204ENST00000366290 HPS3Q969F9 1004 aa8.57□□□□□ -1.04
YBX3-204ENST00000366290 MTMR9Q96QG7 549 aa8.57□□□□□ -1.04
YBX3-204ENST00000366290 RAD9AQ99638 391 aa8.57□□□□□ -1.04
YBX3-204ENST00000366290 TEKT3Q9BXF9 490 aa8.57□□□□□ -1.04
YBX3-204ENST00000366290 IFIH1Q9BYX4 1025 aaKnown RBP8.57□□□□□ -1.04
YBX3-204ENST00000366290 SLC28A3Q9HAS3 691 aa8.57□□□□□ -1.04
YBX3-204ENST00000366290 GABBR1Q9UBS5 961 aa8.57□□□□□ -1.04
YBX3-204ENST00000366290 TCF20Q9UGU0 1960 aaKnown RBP8.56□□□□□ -1.04
YBX3-204ENST00000366290 AP1G1O43747 822 aa8.56□□□□□ -1.04
YBX3-204ENST00000366290 CA3P07451 260 aa8.56□□□□□ -1.04
YBX3-204ENST00000366290 MCM7P33993 719 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms