RNA–Protein interactions for RNA: ENST00000362944.1

RNU6-1260P-201, Transcript of RNA, U6 small nuclear 1260, pseudogene, humanhuman

BASIC

Gene RNU6-1260P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1260P-201ENST00000362944 WDR66Q8TBY9 1149 aa0.69□□□□□ -2.3
RNU6-1260P-201ENST00000362944 MAML1Q92585 1016 aa0.69□□□□□ -2.3
RNU6-1260P-201ENST00000362944 CENPIQ92674 756 aaPredicted RBP0.69□□□□□ -2.3
RNU6-1260P-201ENST00000362944 CELF1Q92879 486 aaKnown RBP0.69□□□□□ -2.3
RNU6-1260P-201ENST00000362944 ZNF524Q96C55 264 aa0.69□□□□□ -2.3
RNU6-1260P-201ENST00000362944 SLC35A4Q96G79 324 aa0.69□□□□□ -2.3
RNU6-1260P-201ENST00000362944 FAXDC2Q96IV6 333 aa0.69□□□□□ -2.3
RNU6-1260P-201ENST00000362944 TEKT5Q96M29 485 aa0.69□□□□□ -2.3
RNU6-1260P-201ENST00000362944 DUX5Q96PT3 197 aa0.69□□□□□ -2.3
RNU6-1260P-201ENST00000362944 FIZ1Q96SL8 496 aa0.69□□□□□ -2.3
RNU6-1260P-201ENST00000362944 TTLL2Q9BWV7 592 aa0.69□□□□□ -2.3
RNU6-1260P-201ENST00000362944 POLDIP3Q9BY77 421 aaKnown RBP0.69□□□□□ -2.3
RNU6-1260P-201ENST00000362944 MAGEH1Q9H213 219 aa0.69□□□□□ -2.3
RNU6-1260P-201ENST00000362944 IL25Q9H293 177 aa0.69□□□□□ -2.3
RNU6-1260P-201ENST00000362944 ABHD16BQ9H3Z7 469 aa0.69□□□□□ -2.3
RNU6-1260P-201ENST00000362944 ZNF696Q9H7X3 374 aa0.69□□□□□ -2.3
RNU6-1260P-201ENST00000362944 ARMT1Q9H993 441 aa0.69□□□□□ -2.3
RNU6-1260P-201ENST00000362944 SAP30LQ9HAJ7 183 aa0.69□□□□□ -2.3
RNU6-1260P-201ENST00000362944 KRCC1Q9NPI7 259 aaPredicted RBP0.69□□□□□ -2.3
RNU6-1260P-201ENST00000362944 VPS45Q9NRW7 570 aa0.69□□□□□ -2.3
RNU6-1260P-201ENST00000362944 PNPOQ9NVS9 261 aa0.69□□□□□ -2.3
RNU6-1260P-201ENST00000362944 TMEM248Q9NWD8 314 aa0.69□□□□□ -2.3
RNU6-1260P-201ENST00000362944 DDX43Q9NXZ2 648 aaKnown RBP0.69□□□□□ -2.3
RNU6-1260P-201ENST00000362944 SEMA5BQ9P283 1151 aa0.69□□□□□ -2.3
RNU6-1260P-201ENST00000362944 CPA4Q9UI42 421 aa0.69□□□□□ -2.3
RNU6-1260P-201ENST00000362944 LAMP3Q9UQV4 416 aa0.69□□□□□ -2.3
RNU6-1260P-201ENST00000362944 ADAM18Q9Y3Q7 739 aa0.69□□□□□ -2.3
RNU6-1260P-201ENST00000362944 MRPL42Q9Y6G3 142 aaKnown RBP0.69□□□□□ -2.3
RNU6-1260P-201ENST00000362944 MUC19Q7Z5P9 8384 aa0.69□□□□□ -2.3
RNU6-1260P-201ENST00000362944 A0A087WWL8 130 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 H7C4K7 107 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 CD3EAPO15446 510 aaKnown RBP0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 USP12O75317 370 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 AFPP02771 609 aaKnown RBP0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 PARP1P09874 1014 aaKnown RBP0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 TMIGD3P0DMS9 266 aaPredicted RBP0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 MYBL2P10244 700 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 FGF5P12034 268 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 GATMP50440 423 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 PGDP52209 483 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 AGFG1P52594 562 aaKnown RBP0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 POLE2P56282 527 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 WNT3P56703 355 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 NKX6-1P78426 367 aaPredicted RBP0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 TIAL1Q01085 375 aaKnown RBP eCLIP0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 FMO1Q01740 532 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 NSUN2Q08J23 767 aaKnown RBP eCLIP0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 CCDC15Q0P6D6 951 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 STK3Q13188 491 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 KCNJ12Q14500 433 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 ODF1Q14990 250 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 PLCB4Q15147 1175 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 ABCB5Q2M3G0 1257 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 INAVAQ3KP66 663 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 CCDC157Q569K6 752 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 EEF1AKMT2Q5JPI9 291 aaKnown RBP0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 Q5PR19 223 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 CROCCQ5TZA2 2017 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 CACHD1Q5VU97 1274 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 LIPMQ5VYY2 423 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 SWSAP1Q6NVH7 229 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 Q6ZSV7 163 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 C9orf139Q6ZV77 190 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 USP49Q70CQ1 688 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 SPATS2Q86XZ4 545 aaKnown RBP0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 RHPN2Q8IUC4 686 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 EPHX4Q8IUS5 362 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 UEVLDQ8IX04 471 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 CNTD1Q8N815 330 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 MAPK1IP1LQ8NDC0 245 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 ENGASEQ8NFI3 743 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 NEK9Q8TD19 979 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 LRRC8CQ8TDW0 803 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 UBXN4Q92575 508 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 KAT2BQ92831 832 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 FBXO17Q96EF6 278 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 P2RY11Q96G91 374 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 UHRF2Q96PU4 802 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 HTATIP2Q9BUP3 242 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 FAM126AQ9BYI3 521 aaPredicted RBP0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 TRIM5Q9C035 493 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 SPAG4Q9NPE6 437 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 TBC1D14Q9P2M4 693 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 DNAJB11Q9UBS4 358 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 NKX1-2Q9UD57 310 aaPredicted RBP0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 MALT1Q9UDY8 824 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 STAP2Q9UGK3 403 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 IPO11Q9UI26 975 aaKnown RBP0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 RIMKLBQ9ULI2 386 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 PCDHB2Q9Y5E7 798 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 NFS1Q9Y697 457 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 CDY1Q9Y6F8 540 aa0.68□□□□□ -2.3
RNU6-1260P-201ENST00000362944 SPATA31A1Q5TZJ5 1347 aa0.67□□□□□ -2.3
RNU6-1260P-201ENST00000362944 LINC01553A4QN01 128 aa0.67□□□□□ -2.3
RNU6-1260P-201ENST00000362944 DPPA5A6NC42 116 aa0.67□□□□□ -2.3
RNU6-1260P-201ENST00000362944 A8MVJ9 347 aa0.67□□□□□ -2.3
RNU6-1260P-201ENST00000362944 PRAC2D3DTV9 90 aa0.67□□□□□ -2.3
RNU6-1260P-201ENST00000362944 K7ESF4 209 aa0.67□□□□□ -2.3
RNU6-1260P-201ENST00000362944 LIASO43766 372 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms