RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 TTC13Q8NBP0 860 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 GPR152Q8TDT2 470 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 USP33Q8TEY7 942 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 AGO3Q9H9G7 860 aaKnown RBP9.48□□□□□ -0.89
CALD1-202ENST00000361901 GDF3Q9NR23 364 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 FGFR1OP2Q9NVK5 253 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 GTF2IRD1Q9UHL9 959 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 TRIM33Q9UPN9 1127 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 STXBP5LQ9Y2K9 1186 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 TLL2Q9Y6L7 1015 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 CENPFP49454 3210 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 CIB2O75838 187 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 INHAP05111 366 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 ACADSP16219 412 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 PHBP35232 272 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 PBX3P40426 434 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 OGDHQ02218 1023 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 ITIH4Q14624 930 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 C6orf183Q5T699 404 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 RFX8Q6ZV50 586 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 CENPUQ71F23 418 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 STKLD1Q8NE28 680 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 STK32AQ8WU08 396 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 CAVIN3Q969G5 261 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 ULBP1Q9BZM6 244 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 ADAMTS10Q9H324 1103 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 PCDHB7Q9Y5E2 793 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 TCP11X1B4DZS4 312 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 ODC1P11926 461 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 GRK4P32298 578 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 PTDSS1P48651 473 aaKnown RBP9.48□□□□□ -0.89
CALD1-202ENST00000361901 NDUFV1P49821 464 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 PDE1BQ01064 536 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 SLC6A3Q01959 620 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 SOX4Q06945 474 aaPredicted RBP9.48□□□□□ -0.89
CALD1-202ENST00000361901 KPNB1Q14974 876 aaKnown RBP9.48□□□□□ -0.89
CALD1-202ENST00000361901 HEATR6Q6AI08 1181 aaKnown RBP9.48□□□□□ -0.89
CALD1-202ENST00000361901 XYLT1Q86Y38 959 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 NT5DC4Q86YG4 428 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 SCUBE1Q8IWY4 988 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 PPP1R14CQ8TAE6 165 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 EPS8L3Q8TE67 593 aaKnown RBP9.48□□□□□ -0.89
CALD1-202ENST00000361901 UCMAQ8WVF2 138 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 PIWIL1Q96J94 861 aaKnown RBP9.48□□□□□ -0.89
CALD1-202ENST00000361901 KLHL8Q9P2G9 620 aaPredicted RBP9.48□□□□□ -0.89
CALD1-202ENST00000361901 ARL5CA6NH57 179 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 GOLGA8RI6L899 631 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 GPR32O75388 356 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 LRCH4O75427 683 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 TOMM70O94826 608 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 FGFR1P11362 822 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 TUBP50607 506 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 NRLP54845 237 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 ARL13BQ3SXY8 428 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 MIB1Q86YT6 1006 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.47□□□□□ -0.89
CALD1-202ENST00000361901 DHRS1Q96LJ7 313 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 KCNK16Q96T55 309 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 CORO1BQ9BR76 489 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 RHOBTB2Q9BYZ6 727 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 ETNK2Q9NVF9 386 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 TDRKHQ9Y2W6 561 aaKnown RBP9.47□□□□□ -0.89
CALD1-202ENST00000361901 ITIH2P19823 946 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 AMPD1P23109 780 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 ACLYP53396 1101 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 LRRC8BQ6P9F7 803 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 PID1Q7Z2X4 250 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 SLITRK1Q96PX8 696 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 PAAF1Q9BRP4 392 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 CLIC5Q9NZA1 410 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 SUN2Q9UH99 717 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 AP4E1Q9UPM8 1137 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 MYBPHLA2RUH7 354 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 DRD4P21917 467 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 KDELR1P24390 212 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 SESN2P58004 480 aaPredicted RBP9.47□□□□□ -0.89
CALD1-202ENST00000361901 NCALDP61601 193 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 BOLA3Q53S33 107 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 EFHC1Q5JVL4 640 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 KLF6Q99612 283 aaPredicted RBP9.47□□□□□ -0.89
CALD1-202ENST00000361901 CENPOQ9BU64 300 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 PCDH18Q9HCL0 1135 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 CREBZFQ9NS37 354 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 EURLQ9NYK6 297 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 PCDH10Q9P2E7 1040 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 DKK3Q9UBP4 350 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 SRRDQ9UH36 339 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 FNDC3AQ9Y2H6 1198 aaKnown RBP9.47□□□□□ -0.89
CALD1-202ENST00000361901 ARL2BPQ9Y2Y0 163 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 COMMD3-BMI1R4GMX3 469 aa9.47□□□□□ -0.89
CALD1-202ENST00000361901 SPTLC1O15269 473 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 SPAG7O75391 227 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 DNAJB2P25686 324 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 GPD2P43304 727 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 IRX4P78413 519 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 YWHAHQ04917 246 aaPredicted RBP9.46□□□□□ -0.89
CALD1-202ENST00000361901 POU5F1BQ06416 359 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 FAM187BQ17R55 369 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 FAM171A1Q5VUB5 890 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 SNX30Q5VWJ9 437 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms