RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 UNGP13051 313 aaPredicted RBP14.27□□□□□ -0.12
COL6A1-201ENST00000361866 STX5Q13190 355 aa14.27□□□□□ -0.12
COL6A1-201ENST00000361866 FAM43BQ6ZT52 329 aaPredicted RBP14.27□□□□□ -0.12
COL6A1-201ENST00000361866 AMIGO3Q86WK7 504 aa14.27□□□□□ -0.12
COL6A1-201ENST00000361866 PCYOX1LQ8NBM8 494 aa14.27□□□□□ -0.12
COL6A1-201ENST00000361866 PPHLN1Q8NEY8 458 aaKnown RBP14.27□□□□□ -0.12
COL6A1-201ENST00000361866 PPP1R13LQ8WUF5 828 aa14.27□□□□□ -0.12
COL6A1-201ENST00000361866 XPNPEP3Q9NQH7 507 aa14.27□□□□□ -0.12
COL6A1-201ENST00000361866 PKD2L2Q9NZM6 624 aa14.27□□□□□ -0.12
COL6A1-201ENST00000361866 VANGL2Q9ULK5 521 aa14.27□□□□□ -0.12
COL6A1-201ENST00000361866 KCPQ6ZWJ8 1503 aa14.27□□□□□ -0.12
COL6A1-201ENST00000361866 LACTBL1A8MY62 500 aa14.27□□□□□ -0.12
COL6A1-201ENST00000361866 SNX2O60749 519 aa14.27□□□□□ -0.12
COL6A1-201ENST00000361866 KCNA2P16389 499 aa14.27□□□□□ -0.12
COL6A1-201ENST00000361866 RALGPS1Q5JS13 557 aa14.27□□□□□ -0.12
COL6A1-201ENST00000361866 FBXO16Q8IX29 292 aaPredicted RBP14.27□□□□□ -0.12
COL6A1-201ENST00000361866 BHLHE22Q8NFJ8 381 aaPredicted RBP14.27□□□□□ -0.12
COL6A1-201ENST00000361866 SLC44A1Q8WWI5 657 aa14.27□□□□□ -0.12
COL6A1-201ENST00000361866 IFT43Q96FT9 208 aa14.27□□□□□ -0.12
COL6A1-201ENST00000361866 APBA2Q99767 749 aa14.27□□□□□ -0.12
COL6A1-201ENST00000361866 SNRNP25Q9BV90 132 aaKnown RBP14.27□□□□□ -0.12
COL6A1-201ENST00000361866 PORCNQ9H237 461 aa14.27□□□□□ -0.12
COL6A1-201ENST00000361866 MMADHCQ9H3L0 296 aaPredicted RBP14.27□□□□□ -0.12
COL6A1-201ENST00000361866 WDR55Q9H6Y2 383 aaPredicted RBP14.27□□□□□ -0.12
COL6A1-201ENST00000361866 AAASQ9NRG9 546 aa14.27□□□□□ -0.12
COL6A1-201ENST00000361866 ACOT9Q9Y305 439 aa14.27□□□□□ -0.12
COL6A1-201ENST00000361866 NR2E3Q9Y5X4 410 aa14.27□□□□□ -0.12
COL6A1-201ENST00000361866 ADGRA2Q96PE1 1338 aa14.27□□□□□ -0.13
COL6A1-201ENST00000361866 ZNF862O60290 1169 aa14.27□□□□□ -0.13
COL6A1-201ENST00000361866 ASS1P00966 412 aaKnown RBP14.27□□□□□ -0.13
COL6A1-201ENST00000361866 EMC10Q5UCC4 262 aa14.27□□□□□ -0.13
COL6A1-201ENST00000361866 NIPA1Q7RTP0 329 aa14.27□□□□□ -0.13
COL6A1-201ENST00000361866 C10orf107Q8IVU9 208 aa14.27□□□□□ -0.13
COL6A1-201ENST00000361866 CCDC117Q8IWD4 279 aaPredicted RBP14.27□□□□□ -0.13
COL6A1-201ENST00000361866 EBF4Q9BQW3 602 aa14.27□□□□□ -0.13
COL6A1-201ENST00000361866 NAT9Q9BTE0 207 aa14.27□□□□□ -0.13
COL6A1-201ENST00000361866 SPC25Q9HBM1 224 aa14.27□□□□□ -0.13
COL6A1-201ENST00000361866 EML4Q9HC35 981 aaKnown RBP14.27□□□□□ -0.13
COL6A1-201ENST00000361866 PFDN6O15212 129 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 S100BP04271 92 aaPredicted RBP14.26□□□□□ -0.13
COL6A1-201ENST00000361866 NFICP08651 508 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 ME2P23368 584 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 ADGRD1Q6QNK2 874 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 RBM44Q6ZP01 1051 aaKnown RBP14.26□□□□□ -0.13
COL6A1-201ENST00000361866 SPATA6LQ8N4H0 392 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 ATPAF2Q8N5M1 289 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 VPS50Q96JG6 964 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 ELP3Q9H9T3 547 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 HACL1Q9UJ83 578 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 MYPNQ86TC9 1320 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 GOLGA8CPA6NN73 597 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 WNT10BO00744 389 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 B4GALT5O43286 388 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 HNRNPRO43390 633 aaKnown RBP14.26□□□□□ -0.13
COL6A1-201ENST00000361866 STRNO43815 780 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 MTA2O94776 668 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 ACAT1P24752 427 aaKnown RBP14.26□□□□□ -0.13
COL6A1-201ENST00000361866 CHN2P52757 468 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 SLC5A9Q2M3M2 681 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 CLVS1Q8IUQ0 354 aaPredicted RBP14.26□□□□□ -0.13
COL6A1-201ENST00000361866 BBS5Q8N3I7 341 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 OR52K1Q8NGK4 314 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 ZNF483Q8TF39 744 aaPredicted RBP14.26□□□□□ -0.13
COL6A1-201ENST00000361866 SEC14L1Q92503 715 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 MBOAT7Q96N66 472 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 HBP1O60381 514 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 TRUB2O95900 331 aaKnown RBP14.26□□□□□ -0.13
COL6A1-201ENST00000361866 PSMB4P28070 264 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 PTPN7P35236 360 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 FOLH1Q04609 750 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 PPM1JQ5JR12 505 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 KYAT3Q6YP21 454 aaKnown RBP14.26□□□□□ -0.13
COL6A1-201ENST00000361866 GPR141Q7Z602 305 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 NKD2Q969F2 451 aaPredicted RBP14.26□□□□□ -0.13
COL6A1-201ENST00000361866 TUBGCP3Q96CW5 907 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 ZMAT2Q96NC0 199 aaKnown RBP14.26□□□□□ -0.13
COL6A1-201ENST00000361866 OMDQ99983 421 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 PAIP1Q9H074 479 aaKnown RBP14.26□□□□□ -0.13
COL6A1-201ENST00000361866 NMRAL1Q9HBL8 299 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 BTBD7Q9P203 1132 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 TJP2Q9UDY2 1190 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 BARX2Q9UMQ3 279 aaPredicted RBP14.26□□□□□ -0.13
COL6A1-201ENST00000361866 PLLPQ9Y342 182 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 RIPK3Q9Y572 518 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 ARFGEF2Q9Y6D5 1785 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 CHADO15335 359 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 TIMM44O43615 452 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 UGT1A9O60656 530 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 STMN1P16949 149 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 NEK3P51956 506 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 CXCL9Q07325 125 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 CAPSQ13938 189 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 CAPRIN1Q14444 709 aaKnown RBP14.26□□□□□ -0.13
COL6A1-201ENST00000361866 EEF1DP3Q658K8 133 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 C4orf22Q6V702 233 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 TFAP2BQ92481 460 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 ZNF560Q96MR9 790 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 GORASP1Q9BQQ3 440 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 UGT1A7Q9HAW7 530 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 UGT1A10Q9HAW8 530 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms