RNA–Protein interactions for RNA: ENST00000361675.6

CALD1-201, Transcript of caldesmon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALD1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-201ENST00000361675 MAD2L2Q9UI95 211 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 RPTORQ8N122 1335 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 UBR3Q6ZT12 1888 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 ARHGEF37A1IGU5 675 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 POLRMTO00411 1230 aaKnown RBP9.35□□□□□ -0.91
CALD1-201ENST00000361675 KPNA4O00629 521 aaPredicted RBP9.35□□□□□ -0.91
CALD1-201ENST00000361675 AQP9O43315 295 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 RARGP13631 454 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 SERPINB1P30740 379 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 RPA3P35244 121 aaPredicted RBP9.35□□□□□ -0.91
CALD1-201ENST00000361675 FDFT1P37268 417 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 RRP1BQ14684 758 aaKnown RBP9.35□□□□□ -0.91
CALD1-201ENST00000361675 ZNF792Q3KQV3 632 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 EFHC1Q5JVL4 640 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 SIGIRRQ6IA17 410 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 SPOPLQ6IQ16 392 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 KDELC1Q6UW63 502 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 ALYREFQ86V81 257 aaKnown RBP9.35□□□□□ -0.91
CALD1-201ENST00000361675 PDSS2Q86YH6 399 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 ZNF527Q8NB42 609 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 PNMA1Q8ND90 353 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 SPATA20Q8TB22 786 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 LRRC15Q8TF66 581 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 TRIM63Q969Q1 353 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 SGK3Q96BR1 496 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 SERPINB12Q96P63 405 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 CRAMP1Q96RY5 1269 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 FAM118BQ9BPY3 351 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 C19orf43Q9BQ61 176 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 TSSK1BQ9BXA7 367 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 TEX12Q9BXU0 123 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 TOR3AQ9H497 397 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 SAR1AQ9NR31 198 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 SLC7A8Q9UHI5 535 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 RPL26L1Q9UNX3 145 aaKnown RBP9.35□□□□□ -0.91
CALD1-201ENST00000361675 LAMB1P07942 1786 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 F5H423 210 aaPredicted RBP9.35□□□□□ -0.91
CALD1-201ENST00000361675 HAT1O14929 419 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 ITM2AO43736 263 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 IDH3BO43837 385 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 PHF2O75151 1096 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 EYA4O95677 639 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 CRABP2P29373 138 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 MSX2P35548 267 aaPredicted RBP9.35□□□□□ -0.91
CALD1-201ENST00000361675 GNL1P36915 607 aaPredicted RBP9.35□□□□□ -0.91
CALD1-201ENST00000361675 NIPAL4Q0D2K0 466 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 TLR1Q15399 786 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 RARS2Q5T160 578 aaKnown RBP9.35□□□□□ -0.91
CALD1-201ENST00000361675 NIPAL1Q6NVV3 410 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 ZNF410Q86VK4 478 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 SNX29P2Q8IUI4 249 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 FBXO27Q8NI29 283 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 SPATA18Q8TC71 538 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 PSPC1Q8WXF1 523 aaKnown RBP9.35□□□□□ -0.91
CALD1-201ENST00000361675 DCPSQ96C86 337 aaKnown RBP9.35□□□□□ -0.91
CALD1-201ENST00000361675 OTUD5Q96G74 571 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 OSGEPQ9NPF4 335 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 ERVK-11Q9UQG0 969 aa9.35□□□□□ -0.91
CALD1-201ENST00000361675 CCDC88AQ3V6T2 1871 aa9.34□□□□□ -0.91
CALD1-201ENST00000361675 A0A1W2PPW3 197 aa9.34□□□□□ -0.91
CALD1-201ENST00000361675 LACTBL1A8MY62 500 aa9.34□□□□□ -0.91
CALD1-201ENST00000361675 PRRT4C9JH25 899 aa9.34□□□□□ -0.91
CALD1-201ENST00000361675 NCAM2O15394 837 aa9.34□□□□□ -0.91
CALD1-201ENST00000361675 EDF1O60869 148 aaKnown RBP9.34□□□□□ -0.91
CALD1-201ENST00000361675 CHRM5P08912 532 aaPredicted RBP9.34□□□□□ -0.91
CALD1-201ENST00000361675 THRAP10827 490 aa9.34□□□□□ -0.91
CALD1-201ENST00000361675 DBTP11182 482 aaKnown RBP9.34□□□□□ -0.91
CALD1-201ENST00000361675 PSMC3P17980 439 aa9.34□□□□□ -0.91
CALD1-201ENST00000361675 HSD3B2P26439 372 aa9.34□□□□□ -0.91
CALD1-201ENST00000361675 SLC1A1P43005 524 aa9.34□□□□□ -0.91
CALD1-201ENST00000361675 NME3Q13232 169 aa9.34□□□□□ -0.91
CALD1-201ENST00000361675 ACVR2BQ13705 512 aa9.34□□□□□ -0.91
CALD1-201ENST00000361675 COTL1Q14019 142 aa9.34□□□□□ -0.91
CALD1-201ENST00000361675 MESDQ14696 234 aa9.34□□□□□ -0.91
CALD1-201ENST00000361675 ARSHQ5FYA8 562 aa9.34□□□□□ -0.91
CALD1-201ENST00000361675 GALNT18Q6P9A2 607 aa9.34□□□□□ -0.91
CALD1-201ENST00000361675 DTHD1Q6ZMT9 781 aa9.34□□□□□ -0.91
CALD1-201ENST00000361675 PLD6Q8N2A8 252 aaKnown RBP9.34□□□□□ -0.91
CALD1-201ENST00000361675 ZNF565Q8N9K5 539 aa9.34□□□□□ -0.91
CALD1-201ENST00000361675 PSD4Q8NDX1 1056 aa9.34□□□□□ -0.91
CALD1-201ENST00000361675 LILRB4Q8NHJ6 448 aa9.34□□□□□ -0.91
CALD1-201ENST00000361675 VPS35Q96QK1 796 aa9.34□□□□□ -0.91
CALD1-201ENST00000361675 TP63Q9H3D4 680 aaPredicted RBP9.34□□□□□ -0.91
CALD1-201ENST00000361675 MAN1C1Q9NR34 630 aa9.34□□□□□ -0.91
CALD1-201ENST00000361675 ANAPC5Q9UJX4 755 aa9.34□□□□□ -0.91
CALD1-201ENST00000361675 AGTPBP1Q9UPW5 1226 aa9.34□□□□□ -0.91
CALD1-201ENST00000361675 SPATA31A6Q5VVP1 1343 aa9.34□□□□□ -0.91
CALD1-201ENST00000361675 E9PMD0 336 aa9.34□□□□□ -0.91
CALD1-201ENST00000361675 KIAA0391O15091 583 aaKnown RBP9.34□□□□□ -0.91
CALD1-201ENST00000361675 ADRA1DP25100 572 aa9.34□□□□□ -0.91
CALD1-201ENST00000361675 EIF3EP60228 445 aaKnown RBP9.34□□□□□ -0.91
CALD1-201ENST00000361675 TMC7Q7Z402 723 aa9.34□□□□□ -0.91
CALD1-201ENST00000361675 ZNF786Q8N393 782 aa9.34□□□□□ -0.91
CALD1-201ENST00000361675 CERS5Q8N5B7 392 aa9.34□□□□□ -0.91
CALD1-201ENST00000361675 RNF139Q8WU17 664 aa9.34□□□□□ -0.91
CALD1-201ENST00000361675 HTRA1Q92743 480 aa9.34□□□□□ -0.91
CALD1-201ENST00000361675 FAM20AQ96MK3 541 aa9.34□□□□□ -0.91
CALD1-201ENST00000361675 TMEM47Q9BQJ4 181 aa9.34□□□□□ -0.91
CALD1-201ENST00000361675 ROPN1BQ9BZX4 212 aaPredicted RBP9.34□□□□□ -0.91
CALD1-201ENST00000361675 NMUR2Q9GZQ4 415 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms