RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 NRP1O14786 923 aa23.36■■□□□ 1.33
LDB1-201ENST00000361198 GPR182O15218 404 aa23.36■■□□□ 1.33
LDB1-201ENST00000361198 DCTN3O75935 186 aa23.36■■□□□ 1.33
LDB1-201ENST00000361198 ALDH3A1P30838 453 aa23.36■■□□□ 1.33
LDB1-201ENST00000361198 MAGEA6P43360 314 aa23.36■■□□□ 1.33
LDB1-201ENST00000361198 YWHAGP61981 247 aaKnown RBP eCLIP23.36■■□□□ 1.33
LDB1-201ENST00000361198 HHATQ5VTY9 493 aa23.36■■□□□ 1.33
LDB1-201ENST00000361198 TMEM86AQ8N2M4 240 aa23.36■■□□□ 1.33
LDB1-201ENST00000361198 MZB1Q8WU39 189 aa23.36■■□□□ 1.33
LDB1-201ENST00000361198 C10orf82Q8WW14 230 aa23.36■■□□□ 1.33
LDB1-201ENST00000361198 ERP27Q96DN0 273 aa23.36■■□□□ 1.33
LDB1-201ENST00000361198 CYTH2Q99418 400 aa23.36■■□□□ 1.33
LDB1-201ENST00000361198 SMOQ99835 787 aa23.36■■□□□ 1.33
LDB1-201ENST00000361198 MYO18AQ92614 2054 aaKnown RBP23.36■■□□□ 1.33
LDB1-201ENST00000361198 GCATO75600 419 aa23.36■■□□□ 1.33
LDB1-201ENST00000361198 AP1G2O75843 785 aa23.36■■□□□ 1.33
LDB1-201ENST00000361198 ANP32DO95626 131 aa23.36■■□□□ 1.33
LDB1-201ENST00000361198 ASGR1P07306 291 aa23.36■■□□□ 1.33
LDB1-201ENST00000361198 CD52P31358 61 aa23.36■■□□□ 1.33
LDB1-201ENST00000361198 THPOP40225 353 aa23.36■■□□□ 1.33
LDB1-201ENST00000361198 CACNA2D1P54289 1103 aa23.36■■□□□ 1.33
LDB1-201ENST00000361198 FAM35AQ86V20 835 aa23.36■■□□□ 1.33
LDB1-201ENST00000361198 ZNF75CPQ92670 426 aaPredicted RBP23.36■■□□□ 1.33
LDB1-201ENST00000361198 QKIQ96PU8 341 aaKnown RBP eCLIP23.36■■□□□ 1.33
LDB1-201ENST00000361198 SLC2A13Q96QE2 648 aa23.36■■□□□ 1.33
LDB1-201ENST00000361198 RAB3IPQ96QF0 476 aaPredicted RBP23.36■■□□□ 1.33
LDB1-201ENST00000361198 ULBP1Q9BZM6 244 aa23.36■■□□□ 1.33
LDB1-201ENST00000361198 POPDC2Q9HBU9 364 aa23.36■■□□□ 1.33
LDB1-201ENST00000361198 ARHGEF4Q9NR80 690 aa23.36■■□□□ 1.33
LDB1-201ENST00000361198 PADI3Q9ULW8 664 aa23.36■■□□□ 1.33
LDB1-201ENST00000361198 STK38LQ9Y2H1 464 aa23.36■■□□□ 1.33
LDB1-201ENST00000361198 A8MUI8 341 aa23.35■■□□□ 1.33
LDB1-201ENST00000361198 HGSO14964 777 aaPredicted RBP23.35■■□□□ 1.33
LDB1-201ENST00000361198 MGEA5O60502 916 aa23.35■■□□□ 1.33
LDB1-201ENST00000361198 FYNP06241 537 aa23.35■■□□□ 1.33
LDB1-201ENST00000361198 IBSPP21815 317 aaPredicted RBP23.35■■□□□ 1.33
LDB1-201ENST00000361198 CBLBQ13191 982 aa23.35■■□□□ 1.33
LDB1-201ENST00000361198 NME3Q13232 169 aa23.35■■□□□ 1.33
LDB1-201ENST00000361198 KBTBD12Q3ZCT8 623 aa23.35■■□□□ 1.33
LDB1-201ENST00000361198 LVRNQ6Q4G3 990 aa23.35■■□□□ 1.33
LDB1-201ENST00000361198 GPRIN1Q7Z2K8 1008 aa23.35■■□□□ 1.33
LDB1-201ENST00000361198 ZNF276Q8N554 614 aa23.35■■□□□ 1.33
LDB1-201ENST00000361198 RNF169Q8NCN4 708 aa23.35■■□□□ 1.33
LDB1-201ENST00000361198 ZMIZ2Q8NF64 920 aa23.35■■□□□ 1.33
LDB1-201ENST00000361198 UTP4Q969X6 686 aaKnown RBP23.35■■□□□ 1.33
LDB1-201ENST00000361198 STAP1Q9ULZ2 295 aa23.35■■□□□ 1.33
LDB1-201ENST00000361198 WFS1O76024 890 aa23.35■■□□□ 1.33
LDB1-201ENST00000361198 TM4SF4P48230 202 aa23.35■■□□□ 1.33
LDB1-201ENST00000361198 CACNB2Q08289 660 aaPredicted RBP23.35■■□□□ 1.33
LDB1-201ENST00000361198 UPP1Q16831 310 aa23.35■■□□□ 1.33
LDB1-201ENST00000361198 TIGD5Q53EQ6 642 aa23.35■■□□□ 1.33
LDB1-201ENST00000361198 PSTKQ8IV42 348 aaKnown RBP23.35■■□□□ 1.33
LDB1-201ENST00000361198 VPS52Q8N1B4 723 aa23.35■■□□□ 1.33
LDB1-201ENST00000361198 NETO2Q8NC67 525 aa23.35■■□□□ 1.33
LDB1-201ENST00000361198 OLFM3Q96PB7 478 aa23.35■■□□□ 1.33
LDB1-201ENST00000361198 FRMD8Q9BZ67 464 aaPredicted RBP23.35■■□□□ 1.33
LDB1-201ENST00000361198 XPNPEP3Q9NQH7 507 aa23.35■■□□□ 1.33
LDB1-201ENST00000361198 PIGVQ9NUD9 493 aa23.35■■□□□ 1.33
LDB1-201ENST00000361198 NOP53Q9NZM5 478 aaKnown RBP23.35■■□□□ 1.33
LDB1-201ENST00000361198 RCOR3Q9P2K3 495 aaPredicted RBP23.35■■□□□ 1.33
LDB1-201ENST00000361198 C15orf41Q9Y2V0 281 aa23.35■■□□□ 1.33
LDB1-201ENST00000361198 TSC2P49815 1807 aa23.35■■□□□ 1.33
LDB1-201ENST00000361198 YJEFN3A6XGL0 299 aa23.34■■□□□ 1.33
LDB1-201ENST00000361198 E7ENQ6 273 aa23.34■■□□□ 1.33
LDB1-201ENST00000361198 PRKCZQ05513 592 aa23.34■■□□□ 1.33
LDB1-201ENST00000361198 KCNA10Q16322 511 aa23.34■■□□□ 1.33
LDB1-201ENST00000361198 HEATR6Q6AI08 1181 aaKnown RBP23.34■■□□□ 1.33
LDB1-201ENST00000361198 OTOAQ7RTW8 1153 aa23.34■■□□□ 1.33
LDB1-201ENST00000361198 MRPL10Q7Z7H8 261 aaKnown RBP23.34■■□□□ 1.33
LDB1-201ENST00000361198 ZNF398Q8TD17 642 aa23.34■■□□□ 1.33
LDB1-201ENST00000361198 N4BP2L2Q92802 583 aaPredicted RBP23.34■■□□□ 1.33
LDB1-201ENST00000361198 INPP5DQ92835 1189 aa23.34■■□□□ 1.33
LDB1-201ENST00000361198 ALKBH8Q96BT7 664 aaKnown RBP23.34■■□□□ 1.33
LDB1-201ENST00000361198 TMEM237Q96Q45 408 aa23.34■■□□□ 1.33
LDB1-201ENST00000361198 TLL2Q9Y6L7 1015 aa23.34■■□□□ 1.33
LDB1-201ENST00000361198 DGKIO75912 1065 aa23.34■■□□□ 1.33
LDB1-201ENST00000361198 TOMM70O94826 608 aa23.34■■□□□ 1.33
LDB1-201ENST00000361198 DEUP1Q05D60 604 aa23.34■■□□□ 1.33
LDB1-201ENST00000361198 C4orf22Q6V702 233 aa23.34■■□□□ 1.33
LDB1-201ENST00000361198 CTU1Q7Z7A3 348 aaKnown RBP23.34■■□□□ 1.33
LDB1-201ENST00000361198 RNF139Q8WU17 664 aa23.34■■□□□ 1.33
LDB1-201ENST00000361198 THOC1Q96FV9 657 aaKnown RBP23.34■■□□□ 1.33
LDB1-201ENST00000361198 CFAP36Q96G28 342 aa23.34■■□□□ 1.33
LDB1-201ENST00000361198 LGMNQ99538 433 aa23.34■■□□□ 1.33
LDB1-201ENST00000361198 I3L4J1 428 aa23.33■■□□□ 1.33
LDB1-201ENST00000361198 TM9SF1O15321 606 aa23.33■■□□□ 1.33
LDB1-201ENST00000361198 MFSD11O43934 449 aa23.33■■□□□ 1.33
LDB1-201ENST00000361198 POMCP01189 267 aa23.33■■□□□ 1.33
LDB1-201ENST00000361198 VAV1P15498 845 aa23.33■■□□□ 1.33
LDB1-201ENST00000361198 DAOAP59103 153 aa23.33■■□□□ 1.33
LDB1-201ENST00000361198 NKX3-2P78367 333 aa23.33■■□□□ 1.33
LDB1-201ENST00000361198 PAN2Q504Q3 1202 aaKnown RBP23.33■■□□□ 1.33
LDB1-201ENST00000361198 ZNF534Q76KX8 674 aa23.33■■□□□ 1.33
LDB1-201ENST00000361198 PRPF39Q86UA1 669 aaKnown RBP23.33■■□□□ 1.33
LDB1-201ENST00000361198 ADAM32Q8TC27 787 aa23.33■■□□□ 1.33
LDB1-201ENST00000361198 NSMCE1Q8WV22 266 aa23.33■■□□□ 1.33
LDB1-201ENST00000361198 TFB1MQ8WVM0 346 aaKnown RBP23.33■■□□□ 1.33
LDB1-201ENST00000361198 CREB3O43889 395 aa23.33■■□□□ 1.32
LDB1-201ENST00000361198 SPAG6O75602 509 aa23.33■■□□□ 1.32
LDB1-201ENST00000361198 T-ENOLP0DO92 83 aa23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms