RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 OLIG2Q13516 323 aa21.41■■□□□ 1.02
TRIM3-202ENST00000359518 TMEM132DQ14C87 1099 aa21.41■■□□□ 1.02
TRIM3-202ENST00000359518 FAM91A1Q658Y4 838 aa21.41■■□□□ 1.02
TRIM3-202ENST00000359518 C10orf107Q8IVU9 208 aa21.41■■□□□ 1.02
TRIM3-202ENST00000359518 SEPT10Q9P0V9 454 aa21.41■■□□□ 1.02
TRIM3-202ENST00000359518 APOBEC2Q9Y235 224 aaKnown RBP21.41■■□□□ 1.02
TRIM3-202ENST00000359518 TNFSF13BQ9Y275 285 aa21.41■■□□□ 1.02
TRIM3-202ENST00000359518 SYNJ2BP-COX16A0A087WUM0 186 aa21.4■■□□□ 1.02
TRIM3-202ENST00000359518 PAPSS1O43252 624 aaPredicted RBP21.4■■□□□ 1.02
TRIM3-202ENST00000359518 CPOXP36551 454 aa21.4■■□□□ 1.02
TRIM3-202ENST00000359518 ABCG1P45844 678 aa21.4■■□□□ 1.02
TRIM3-202ENST00000359518 PDE1CQ14123 709 aaPredicted RBP21.4■■□□□ 1.02
TRIM3-202ENST00000359518 TEDDM1Q5T9Z0 273 aa21.4■■□□□ 1.02
TRIM3-202ENST00000359518 OLFML1Q6UWY5 402 aa21.4■■□□□ 1.02
TRIM3-202ENST00000359518 ILDR2Q71H61 639 aa21.4■■□□□ 1.02
TRIM3-202ENST00000359518 KHSRPQ92945 711 aaKnown RBP eCLIP21.4■■□□□ 1.02
TRIM3-202ENST00000359518 RTP4Q96DX8 246 aa21.4■■□□□ 1.02
TRIM3-202ENST00000359518 IFT43Q96FT9 208 aa21.4■■□□□ 1.02
TRIM3-202ENST00000359518 MAN1C1Q9NR34 630 aa21.4■■□□□ 1.02
TRIM3-202ENST00000359518 COX16Q9P0S2 106 aa21.4■■□□□ 1.02
TRIM3-202ENST00000359518 SNX9Q9Y5X1 595 aa21.4■■□□□ 1.02
TRIM3-202ENST00000359518 IGKV6-21A0A0C4DH24 114 aa21.4■■□□□ 1.02
TRIM3-202ENST00000359518 GABBR2O75899 941 aa21.4■■□□□ 1.02
TRIM3-202ENST00000359518 P4HA1P13674 534 aa21.4■■□□□ 1.02
TRIM3-202ENST00000359518 TCHHL1Q5QJ38 904 aaPredicted RBP21.4■■□□□ 1.02
TRIM3-202ENST00000359518 LCLAT1Q6UWP7 414 aa21.4■■□□□ 1.02
TRIM3-202ENST00000359518 MRPL45Q9BRJ2 306 aaKnown RBP21.4■■□□□ 1.02
TRIM3-202ENST00000359518 GINS2Q9Y248 185 aa21.4■■□□□ 1.02
TRIM3-202ENST00000359518 PCDHA11Q9Y5I1 949 aa21.4■■□□□ 1.02
TRIM3-202ENST00000359518 A6NJR5 290 aa21.39■■□□□ 1.02
TRIM3-202ENST00000359518 PPEF2O14830 753 aa21.39■■□□□ 1.02
TRIM3-202ENST00000359518 ARRB2P32121 409 aa21.39■■□□□ 1.02
TRIM3-202ENST00000359518 WASHC5Q12768 1159 aa21.39■■□□□ 1.02
TRIM3-202ENST00000359518 MBLAC2Q68D91 279 aa21.39■■□□□ 1.02
TRIM3-202ENST00000359518 HEATR6Q6AI08 1181 aaKnown RBP21.39■■□□□ 1.02
TRIM3-202ENST00000359518 IFT122Q9HBG6 1241 aa21.39■■□□□ 1.02
TRIM3-202ENST00000359518 DPP3Q9NY33 737 aa21.39■■□□□ 1.02
TRIM3-202ENST00000359518 FGF3P11487 239 aaPredicted RBP21.39■■□□□ 1.01
TRIM3-202ENST00000359518 MGAT1P26572 445 aa21.39■■□□□ 1.01
TRIM3-202ENST00000359518 ASPHQ12797 758 aa21.39■■□□□ 1.01
TRIM3-202ENST00000359518 MAVSQ7Z434 540 aa21.39■■□□□ 1.01
TRIM3-202ENST00000359518 CDKL3Q8IVW4 592 aaPredicted RBP21.39■■□□□ 1.01
TRIM3-202ENST00000359518 TNS4Q8IZW8 715 aa21.39■■□□□ 1.01
TRIM3-202ENST00000359518 MOCOSQ96EN8 888 aa21.39■■□□□ 1.01
TRIM3-202ENST00000359518 AKT3Q9Y243 479 aa21.39■■□□□ 1.01
TRIM3-202ENST00000359518 ADCY6O43306 1168 aa21.39■■□□□ 1.01
TRIM3-202ENST00000359518 RNASEH1O60930 286 aaKnown RBP21.39■■□□□ 1.01
TRIM3-202ENST00000359518 SIN3BO75182 1162 aa21.39■■□□□ 1.01
TRIM3-202ENST00000359518 AP1ARQ63HQ0 302 aa21.39■■□□□ 1.01
TRIM3-202ENST00000359518 RNF111Q6ZNA4 994 aa21.39■■□□□ 1.01
TRIM3-202ENST00000359518 RASSF3Q86WH2 238 aa21.39■■□□□ 1.01
TRIM3-202ENST00000359518 PPP1R36Q96LQ0 422 aa21.39■■□□□ 1.01
TRIM3-202ENST00000359518 OXCT2Q9BYC2 517 aaPredicted RBP21.39■■□□□ 1.01
TRIM3-202ENST00000359518 FRMD8Q9BZ67 464 aaPredicted RBP21.39■■□□□ 1.01
TRIM3-202ENST00000359518 TRIM4Q9C037 500 aa21.39■■□□□ 1.01
TRIM3-202ENST00000359518 XPNPEP3Q9NQH7 507 aa21.39■■□□□ 1.01
TRIM3-202ENST00000359518 PDGFCQ9NRA1 345 aa21.39■■□□□ 1.01
TRIM3-202ENST00000359518 TMPRSS4Q9NRS4 437 aa21.39■■□□□ 1.01
TRIM3-202ENST00000359518 ANK1P16157 1881 aa21.38■■□□□ 1.01
TRIM3-202ENST00000359518 ERVK-10P10266 1014 aa21.38■■□□□ 1.01
TRIM3-202ENST00000359518 LCP1P13796 627 aa21.38■■□□□ 1.01
TRIM3-202ENST00000359518 MLH1P40692 756 aa21.38■■□□□ 1.01
TRIM3-202ENST00000359518 SLC6A3Q01959 620 aa21.38■■□□□ 1.01
TRIM3-202ENST00000359518 BIRC2Q13490 618 aa21.38■■□□□ 1.01
TRIM3-202ENST00000359518 RASIP1Q5U651 963 aa21.38■■□□□ 1.01
TRIM3-202ENST00000359518 LBX2Q6XYB7 198 aa21.38■■□□□ 1.01
TRIM3-202ENST00000359518 CMC1Q7Z7K0 106 aa21.38■■□□□ 1.01
TRIM3-202ENST00000359518 CCDC185Q8N715 623 aa21.38■■□□□ 1.01
TRIM3-202ENST00000359518 MCUQ8NE86 351 aa21.38■■□□□ 1.01
TRIM3-202ENST00000359518 NDRG1Q92597 394 aaKnown RBP21.38■■□□□ 1.01
TRIM3-202ENST00000359518 CYP3A43Q9HB55 503 aa21.38■■□□□ 1.01
TRIM3-202ENST00000359518 ARF4P18085 180 aaPredicted RBP21.38■■□□□ 1.01
TRIM3-202ENST00000359518 CALRP27797 417 aaKnown RBP21.38■■□□□ 1.01
TRIM3-202ENST00000359518 L1CAMP32004 1257 aa21.38■■□□□ 1.01
TRIM3-202ENST00000359518 TUBB3Q13509 450 aa21.38■■□□□ 1.01
TRIM3-202ENST00000359518 EFHC1Q5JVL4 640 aa21.38■■□□□ 1.01
TRIM3-202ENST00000359518 CWF19L1Q69YN2 538 aaKnown RBP21.38■■□□□ 1.01
TRIM3-202ENST00000359518 HACE1Q8IYU2 909 aa21.38■■□□□ 1.01
TRIM3-202ENST00000359518 KIF12Q96FN5 646 aa21.38■■□□□ 1.01
TRIM3-202ENST00000359518 PIM2Q9P1W9 311 aa21.38■■□□□ 1.01
TRIM3-202ENST00000359518 G3BP2Q9UN86 482 aaKnown RBP21.38■■□□□ 1.01
TRIM3-202ENST00000359518 GOT1P17174 413 aa21.37■■□□□ 1.01
TRIM3-202ENST00000359518 MAGEA3P43357 314 aa21.37■■□□□ 1.01
TRIM3-202ENST00000359518 USP4Q13107 963 aa21.37■■□□□ 1.01
TRIM3-202ENST00000359518 ITGA9Q13797 1035 aa21.37■■□□□ 1.01
TRIM3-202ENST00000359518 GADL1Q6ZQY3 521 aa21.37■■□□□ 1.01
TRIM3-202ENST00000359518 PHTF2Q8N3S3 785 aa21.37■■□□□ 1.01
TRIM3-202ENST00000359518 LRRC39Q96DD0 335 aa21.37■■□□□ 1.01
TRIM3-202ENST00000359518 PGBD4Q96DM1 585 aa21.37■■□□□ 1.01
TRIM3-202ENST00000359518 SPATC1LQ9H0A9 340 aa21.37■■□□□ 1.01
TRIM3-202ENST00000359518 PDZD7Q9H5P4 517 aa21.37■■□□□ 1.01
TRIM3-202ENST00000359518 MOCS1Q9NZB8 636 aa21.37■■□□□ 1.01
TRIM3-202ENST00000359518 TMEM216Q9P0N5 145 aa21.37■■□□□ 1.01
TRIM3-202ENST00000359518 AP4E1Q9UPM8 1137 aa21.37■■□□□ 1.01
TRIM3-202ENST00000359518 KIF3CO14782 793 aa21.37■■□□□ 1.01
TRIM3-202ENST00000359518 BIRC5O15392 142 aa21.37■■□□□ 1.01
TRIM3-202ENST00000359518 VAV1P15498 845 aa21.37■■□□□ 1.01
TRIM3-202ENST00000359518 EDNRBP24530 442 aa21.37■■□□□ 1.01
TRIM3-202ENST00000359518 SERPINB6P35237 376 aa21.37■■□□□ 1.01
TRIM3-202ENST00000359518 CELF3Q5SZQ8 465 aaKnown RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms