RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 ABT1Q9ULW3 272 aaKnown RBP11.53□□□□□ -0.56
SSU72-202ENST00000359060 C3orf70A6NLC5 250 aaPredicted RBP11.52□□□□□ -0.56
SSU72-202ENST00000359060 NEMP1O14524 444 aa11.52□□□□□ -0.56
SSU72-202ENST00000359060 FCHO1O14526 889 aa11.52□□□□□ -0.56
SSU72-202ENST00000359060 TFE3P19532 575 aaPredicted RBP11.52□□□□□ -0.56
SSU72-202ENST00000359060 PROZP22891 400 aa11.52□□□□□ -0.56
SSU72-202ENST00000359060 NDUFV1P49821 464 aa11.52□□□□□ -0.56
SSU72-202ENST00000359060 ZNF618Q5T7W0 954 aa11.52□□□□□ -0.56
SSU72-202ENST00000359060 N4BP2L1Q5TBK1 243 aaPredicted RBP11.52□□□□□ -0.56
SSU72-202ENST00000359060 UNC5AQ6ZN44 842 aa11.52□□□□□ -0.56
SSU72-202ENST00000359060 IGDCC3Q8IVU1 814 aa11.52□□□□□ -0.56
SSU72-202ENST00000359060 MCUQ8NE86 351 aa11.52□□□□□ -0.56
SSU72-202ENST00000359060 BRI3BPQ8WY22 251 aa11.52□□□□□ -0.56
SSU72-202ENST00000359060 SERAC1Q96JX3 654 aa11.52□□□□□ -0.56
SSU72-202ENST00000359060 SNX27Q96L92 541 aa11.52□□□□□ -0.56
SSU72-202ENST00000359060 EBNA1BP2Q99848 306 aaKnown RBP11.52□□□□□ -0.56
SSU72-202ENST00000359060 STOML1Q9UBI4 398 aa11.52□□□□□ -0.56
SSU72-202ENST00000359060 COL1A2P08123 1366 aa11.52□□□□□ -0.57
SSU72-202ENST00000359060 A0A0A0MRY4 1105 aa11.52□□□□□ -0.57
SSU72-202ENST00000359060 SOCS7O14512 581 aa11.52□□□□□ -0.57
SSU72-202ENST00000359060 PMPCBO75439 489 aa11.52□□□□□ -0.57
SSU72-202ENST00000359060 ALADP13716 330 aa11.52□□□□□ -0.57
SSU72-202ENST00000359060 NOS2P35228 1153 aa11.52□□□□□ -0.57
SSU72-202ENST00000359060 SPRP35270 261 aaPredicted RBP11.52□□□□□ -0.57
SSU72-202ENST00000359060 GRIA1P42261 906 aa11.52□□□□□ -0.57
SSU72-202ENST00000359060 MATKP42679 507 aa11.52□□□□□ -0.57
SSU72-202ENST00000359060 SCNN1GP51170 649 aa11.52□□□□□ -0.57
SSU72-202ENST00000359060 HDAC4P56524 1084 aa11.52□□□□□ -0.57
SSU72-202ENST00000359060 BST1Q10588 318 aa11.52□□□□□ -0.57
SSU72-202ENST00000359060 PCSK7Q16549 785 aa11.52□□□□□ -0.57
SSU72-202ENST00000359060 FSCN1Q16658 493 aaKnown RBP11.52□□□□□ -0.57
SSU72-202ENST00000359060 TAPT1Q6NXT6 567 aa11.52□□□□□ -0.57
SSU72-202ENST00000359060 TRMT10BQ6PF06 316 aaKnown RBP11.52□□□□□ -0.57
SSU72-202ENST00000359060 GABPB2Q8TAK5 448 aaPredicted RBP11.52□□□□□ -0.57
SSU72-202ENST00000359060 SPATA13Q96N96 652 aa11.52□□□□□ -0.57
SSU72-202ENST00000359060 TBC1D10AQ9BXI6 508 aa11.52□□□□□ -0.57
SSU72-202ENST00000359060 MAGEB5Q9BZ81 275 aa11.52□□□□□ -0.57
SSU72-202ENST00000359060 IPPQ9Y573 584 aa11.52□□□□□ -0.57
SSU72-202ENST00000359060 UGT1A9O60656 530 aa11.52□□□□□ -0.57
SSU72-202ENST00000359060 METTL18O95568 372 aa11.52□□□□□ -0.57
SSU72-202ENST00000359060 COG7P83436 770 aa11.52□□□□□ -0.57
SSU72-202ENST00000359060 FAM187BQ17R55 369 aa11.52□□□□□ -0.57
SSU72-202ENST00000359060 PPP1R15BQ5SWA1 713 aa11.52□□□□□ -0.57
SSU72-202ENST00000359060 RYBPQ8N488 228 aaPredicted RBP11.52□□□□□ -0.57
SSU72-202ENST00000359060 WNT8BQ93098 351 aa11.52□□□□□ -0.57
SSU72-202ENST00000359060 MTBPQ96DY7 904 aa11.52□□□□□ -0.57
SSU72-202ENST00000359060 KCTD15Q96SI1 283 aaPredicted RBP11.52□□□□□ -0.57
SSU72-202ENST00000359060 C16orf70Q9BSU1 422 aa11.52□□□□□ -0.57
SSU72-202ENST00000359060 UGT1A7Q9HAW7 530 aa11.52□□□□□ -0.57
SSU72-202ENST00000359060 UGT1A10Q9HAW8 530 aa11.52□□□□□ -0.57
SSU72-202ENST00000359060 UGT1A8Q9HAW9 530 aa11.52□□□□□ -0.57
SSU72-202ENST00000359060 DNAJC16Q9Y2G8 782 aa11.52□□□□□ -0.57
SSU72-202ENST00000359060 PRG3Q9Y2Y8 225 aaPredicted RBP11.52□□□□□ -0.57
SSU72-202ENST00000359060 BHMG1C9JSJ3 638 aaPredicted RBP11.51□□□□□ -0.57
SSU72-202ENST00000359060 SNAI1O95863 264 aaPredicted RBP11.51□□□□□ -0.57
SSU72-202ENST00000359060 PGK1P00558 417 aa11.51□□□□□ -0.57
SSU72-202ENST00000359060 PTPN4P29074 926 aa11.51□□□□□ -0.57
SSU72-202ENST00000359060 ELF1P32519 619 aa11.51□□□□□ -0.57
SSU72-202ENST00000359060 USP10Q14694 798 aaKnown RBP11.51□□□□□ -0.57
SSU72-202ENST00000359060 FASTKD1Q53R41 847 aaKnown RBP11.51□□□□□ -0.57
SSU72-202ENST00000359060 HSP90AA5PQ58FG0 334 aa11.51□□□□□ -0.57
SSU72-202ENST00000359060 SLC26A9Q7LBE3 791 aa11.51□□□□□ -0.57
SSU72-202ENST00000359060 STRA8Q7Z7C7 330 aa11.51□□□□□ -0.57
SSU72-202ENST00000359060 SPATA2LQ8IUW3 424 aaPredicted RBP11.51□□□□□ -0.57
SSU72-202ENST00000359060 ATPAF2Q8N5M1 289 aa11.51□□□□□ -0.57
SSU72-202ENST00000359060 OR52K1Q8NGK4 314 aa11.51□□□□□ -0.57
SSU72-202ENST00000359060 TEKT4Q8WW24 435 aa11.51□□□□□ -0.57
SSU72-202ENST00000359060 POPDC2Q9HBU9 364 aa11.51□□□□□ -0.57
SSU72-202ENST00000359060 BDNFP23560 247 aa11.51□□□□□ -0.57
SSU72-202ENST00000359060 AXLP30530 894 aa11.51□□□□□ -0.57
SSU72-202ENST00000359060 PTPN7P35236 360 aa11.51□□□□□ -0.57
SSU72-202ENST00000359060 STKLD1Q8NE28 680 aa11.51□□□□□ -0.57
SSU72-202ENST00000359060 OR6P1Q8NGX9 317 aa11.51□□□□□ -0.57
SSU72-202ENST00000359060 EXT2Q93063 718 aa11.51□□□□□ -0.57
SSU72-202ENST00000359060 P2RY11Q96G91 374 aa11.51□□□□□ -0.57
SSU72-202ENST00000359060 CHKBQ9Y259 395 aa11.51□□□□□ -0.57
SSU72-202ENST00000359060 DNAJC25-GNG10A0A024R161 153 aa11.51□□□□□ -0.57
SSU72-202ENST00000359060 TRDMT1O14717 391 aaKnown RBP11.51□□□□□ -0.57
SSU72-202ENST00000359060 MFSD11O43934 449 aa11.51□□□□□ -0.57
SSU72-202ENST00000359060 OPHN1O60890 802 aa11.51□□□□□ -0.57
SSU72-202ENST00000359060 HMBSP08397 361 aa11.51□□□□□ -0.57
SSU72-202ENST00000359060 ERCC2P18074 760 aa11.51□□□□□ -0.57
SSU72-202ENST00000359060 PEX19P40855 299 aa11.51□□□□□ -0.57
SSU72-202ENST00000359060 RGS2P41220 211 aa11.51□□□□□ -0.57
SSU72-202ENST00000359060 MAP7D1Q3KQU3 841 aa11.51□□□□□ -0.57
SSU72-202ENST00000359060 MFSD14CQ5VZR4 134 aa11.51□□□□□ -0.57
SSU72-202ENST00000359060 OLFML1Q6UWY5 402 aa11.51□□□□□ -0.57
SSU72-202ENST00000359060 LRRC39Q96DD0 335 aa11.51□□□□□ -0.57
SSU72-202ENST00000359060 UNKQ9C0B0 810 aaKnown RBP11.51□□□□□ -0.57
SSU72-202ENST00000359060 TASP1Q9H6P5 420 aa11.51□□□□□ -0.57
SSU72-202ENST00000359060 TMPRSS4Q9NRS4 437 aa11.51□□□□□ -0.57
SSU72-202ENST00000359060 ABI2Q9NYB9 513 aaPredicted RBP11.51□□□□□ -0.57
SSU72-202ENST00000359060 GLRBP48167 497 aa11.5□□□□□ -0.57
SSU72-202ENST00000359060 LILRA4P59901 499 aa11.5□□□□□ -0.57
SSU72-202ENST00000359060 MGAT5Q09328 741 aa11.5□□□□□ -0.57
SSU72-202ENST00000359060 CCDC142Q17RM4 750 aa11.5□□□□□ -0.57
SSU72-202ENST00000359060 ZNF792Q3KQV3 632 aa11.5□□□□□ -0.57
SSU72-202ENST00000359060 PABPC5Q96DU9 382 aaKnown RBP11.5□□□□□ -0.57
SSU72-202ENST00000359060 SGF29Q96ES7 293 aa11.5□□□□□ -0.57
SSU72-202ENST00000359060 LRRC40Q9H9A6 602 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms