RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 TAF6P49848 677 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 BCAR1P56945 870 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 EFTUD2Q15029 972 aaKnown RBP eCLIP14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 RASIP1Q5U651 963 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 CNKSR3Q6P9H4 555 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 SLC26A9Q7LBE3 791 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 PALM2Q8IXS6 379 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 PCDH19Q8TAB3 1148 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 CLEC4CQ8WTT0 213 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 FAF2Q96CS3 445 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 RTP4Q96DX8 246 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 MRRFQ96E11 262 aaKnown RBP14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 RMDN2Q96LZ7 410 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 RNF39Q9H2S5 420 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 AGO3Q9H9G7 860 aaKnown RBP14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 KIF9Q9HAQ2 790 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 USP29Q9HBJ7 922 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 CYLDQ9NQC7 956 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 MTMR10Q9NXD2 777 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 PAK5Q9P286 719 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 ZBBXA8MT70 800 aa14.79□□□□□ -0.04
NIPAL3-203ENST00000358028 CHADO15335 359 aa14.79□□□□□ -0.04
NIPAL3-203ENST00000358028 KCNN4O15554 427 aa14.79□□□□□ -0.04
NIPAL3-203ENST00000358028 LCP1P13796 627 aa14.79□□□□□ -0.04
NIPAL3-203ENST00000358028 TFE3P19532 575 aaPredicted RBP14.79□□□□□ -0.04
NIPAL3-203ENST00000358028 LMO2P25791 158 aa14.79□□□□□ -0.04
NIPAL3-203ENST00000358028 RPA3P35244 121 aaPredicted RBP14.79□□□□□ -0.04
NIPAL3-203ENST00000358028 SV2CQ496J9 727 aa14.79□□□□□ -0.04
NIPAL3-203ENST00000358028 FAM109BQ6ICB4 259 aaPredicted RBP14.79□□□□□ -0.04
NIPAL3-203ENST00000358028 C3orf62Q6ZUJ4 267 aa14.79□□□□□ -0.04
NIPAL3-203ENST00000358028 ARCQ7LC44 396 aa14.79□□□□□ -0.04
NIPAL3-203ENST00000358028 LIMS2Q7Z4I7 341 aa14.79□□□□□ -0.04
NIPAL3-203ENST00000358028 C4orf33Q8N1A6 199 aa14.79□□□□□ -0.04
NIPAL3-203ENST00000358028 RAB3IPQ96QF0 476 aaPredicted RBP14.79□□□□□ -0.04
NIPAL3-203ENST00000358028 CYTH2Q99418 400 aa14.79□□□□□ -0.04
NIPAL3-203ENST00000358028 PAFAH2Q99487 392 aa14.79□□□□□ -0.04
NIPAL3-203ENST00000358028 C11orf84Q9BUA3 381 aaPredicted RBP14.79□□□□□ -0.04
NIPAL3-203ENST00000358028 CHMP2BQ9UQN3 213 aa14.79□□□□□ -0.04
NIPAL3-203ENST00000358028 BCLAF3A2AJT9 711 aaKnown RBP14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 UNC5CO95185 931 aa14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 ZBED1O96006 694 aa14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 CD52P31358 61 aa14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 MSH2P43246 934 aa14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 ACADSBP45954 432 aa14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 CRYBB1P53674 252 aaPredicted RBP14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 SOX4Q06945 474 aaPredicted RBP14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 MGAT5Q09328 741 aa14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 APPL2Q8NEU8 664 aa14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 CENPIQ92674 756 aaPredicted RBP14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 BAIAP2L1Q9UHR4 511 aa14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 IPPQ9Y573 584 aa14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 HEY1Q9Y5J3 304 aa14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 A0A1W2PPM1 405 aa14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 KRT4P19013 534 aa14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 CYP2F1P24903 491 aa14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 RBL1P28749 1068 aa14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 L1CAMP32004 1257 aa14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 ELK3P41970 407 aa14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 DNAJC3Q13217 504 aa14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 SLC1A5Q15758 541 aa14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 DPYSL2Q16555 572 aa14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 PPP6R3Q5H9R7 873 aaPredicted RBP14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 C4orf22Q6V702 233 aa14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 FAM47EQ6ZV65 393 aa14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 CDKL3Q8IVW4 592 aaPredicted RBP14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 SMG8Q8ND04 991 aaKnown RBP14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 SLC2A14Q8TDB8 520 aa14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 MZB1Q8WU39 189 aa14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 DCAKDQ8WVC6 231 aa14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 SEPT8Q92599 483 aa14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 HSFY1Q96LI6 401 aa14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 VPS11Q9H270 941 aa14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 NRDE2Q9H7Z3 1164 aa14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 GOLGA2P5Q9HBQ8 144 aa14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 PNPLA8Q9NP80 782 aa14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 RAB6BQ9NRW1 208 aa14.78□□□□□ -0.04
NIPAL3-203ENST00000358028 UNC80Q8N2C7 3258 aa14.77□□□□□ -0.04
NIPAL3-203ENST00000358028 IQANK1A0A1B0GTG1 560 aa14.77□□□□□ -0.05
NIPAL3-203ENST00000358028 HUS1O60921 280 aa14.77□□□□□ -0.05
NIPAL3-203ENST00000358028 WFS1O76024 890 aa14.77□□□□□ -0.05
NIPAL3-203ENST00000358028 BAIAP3O94812 1187 aa14.77□□□□□ -0.05
NIPAL3-203ENST00000358028 WARSP23381 471 aaKnown RBP14.77□□□□□ -0.05
NIPAL3-203ENST00000358028 WDR5P61964 334 aaKnown RBP14.77□□□□□ -0.05
NIPAL3-203ENST00000358028 KCNJ2P63252 427 aa14.77□□□□□ -0.05
NIPAL3-203ENST00000358028 MTM1Q13496 603 aa14.77□□□□□ -0.05
NIPAL3-203ENST00000358028 SEPT7Q16181 437 aaKnown RBP14.77□□□□□ -0.05
NIPAL3-203ENST00000358028 PARP6Q2NL67 630 aa14.77□□□□□ -0.05
NIPAL3-203ENST00000358028 FYB2Q5VWT5 728 aa14.77□□□□□ -0.05
NIPAL3-203ENST00000358028 LVRNQ6Q4G3 990 aa14.77□□□□□ -0.05
NIPAL3-203ENST00000358028 OSTM1Q86WC4 334 aa14.77□□□□□ -0.05
NIPAL3-203ENST00000358028 IGDCC3Q8IVU1 814 aa14.77□□□□□ -0.05
NIPAL3-203ENST00000358028 ADGRF2Q8IZF7 708 aa14.77□□□□□ -0.05
NIPAL3-203ENST00000358028 ZNF75CPQ92670 426 aaPredicted RBP14.77□□□□□ -0.05
NIPAL3-203ENST00000358028 TNIP3Q96KP6 325 aa14.77□□□□□ -0.05
NIPAL3-203ENST00000358028 LRRC37BQ96QE4 947 aa14.77□□□□□ -0.05
NIPAL3-203ENST00000358028 DHX35Q9H5Z1 703 aaKnown RBP14.77□□□□□ -0.05
NIPAL3-203ENST00000358028 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.77□□□□□ -0.05
NIPAL3-203ENST00000358028 GGT7Q9UJ14 662 aa14.77□□□□□ -0.05
NIPAL3-203ENST00000358028 PADI3Q9ULW8 664 aa14.77□□□□□ -0.05
NIPAL3-203ENST00000358028 TEX264Q9Y6I9 313 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms