RNA–Protein interactions for RNA: ENST00000357880.7

LINC01554-201, Transcript of long intergenic non-protein coding RNA 1554, humanhuman

TSL 1 (best)

Gene LINC01554, Length 804 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554-201ENST00000357880 GRAP2O75791 330 aa18.29■□□□□ 0.52
LINC01554-201ENST00000357880 ATP1A3P13637 1013 aa18.29■□□□□ 0.52
LINC01554-201ENST00000357880 HOXD9P28356 352 aaPredicted RBP18.29■□□□□ 0.52
LINC01554-201ENST00000357880 SLC11A2P49281 568 aa18.29■□□□□ 0.52
LINC01554-201ENST00000357880 SGSHP51688 502 aa18.29■□□□□ 0.52
LINC01554-201ENST00000357880 PITX1P78337 314 aaPredicted RBP18.29■□□□□ 0.52
LINC01554-201ENST00000357880 UBXN1Q04323 297 aa18.29■□□□□ 0.52
LINC01554-201ENST00000357880 GEN1Q17RS7 908 aa18.29■□□□□ 0.52
LINC01554-201ENST00000357880 PTPN20Q4JDL3 420 aa18.29■□□□□ 0.52
LINC01554-201ENST00000357880 DCAF6Q58WW2 860 aa18.29■□□□□ 0.52
LINC01554-201ENST00000357880 LAIR1Q6GTX8 287 aa18.29■□□□□ 0.52
LINC01554-201ENST00000357880 APTXQ7Z2E3 356 aaKnown RBP18.29■□□□□ 0.52
LINC01554-201ENST00000357880 TRMT11Q7Z4G4 463 aaKnown RBP18.29■□□□□ 0.52
LINC01554-201ENST00000357880 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.29■□□□□ 0.52
LINC01554-201ENST00000357880 KBTBD6Q86V97 674 aa18.29■□□□□ 0.52
LINC01554-201ENST00000357880 MDGA1Q8NFP4 955 aa18.29■□□□□ 0.52
LINC01554-201ENST00000357880 DDX1Q92499 740 aaKnown RBP18.29■□□□□ 0.52
LINC01554-201ENST00000357880 ERLEC1Q96DZ1 483 aa18.29■□□□□ 0.52
LINC01554-201ENST00000357880 TMA16Q96EY4 203 aaKnown RBP18.29■□□□□ 0.52
LINC01554-201ENST00000357880 PCMTD1Q96MG8 357 aaPredicted RBP18.29■□□□□ 0.52
LINC01554-201ENST00000357880 TRIM62Q9BVG3 475 aa18.29■□□□□ 0.52
LINC01554-201ENST00000357880 SYNCQ9H7C4 482 aa18.29■□□□□ 0.52
LINC01554-201ENST00000357880 GMEB2Q9UKD1 530 aa18.29■□□□□ 0.52
LINC01554-201ENST00000357880 SLC27A6Q9Y2P4 619 aa18.29■□□□□ 0.52
LINC01554-201ENST00000357880 ZNF292O60281 2723 aa18.29■□□□□ 0.52
LINC01554-201ENST00000357880 EML5Q05BV3 1969 aa18.29■□□□□ 0.52
LINC01554-201ENST00000357880 DCLK1O15075 740 aa18.28■□□□□ 0.52
LINC01554-201ENST00000357880 GFPT2O94808 682 aa18.28■□□□□ 0.52
LINC01554-201ENST00000357880 TRUB2O95900 331 aaKnown RBP18.28■□□□□ 0.52
LINC01554-201ENST00000357880 MMEP08473 750 aa18.28■□□□□ 0.52
LINC01554-201ENST00000357880 NTSR1P30989 418 aa18.28■□□□□ 0.52
LINC01554-201ENST00000357880 SLC6A4P31645 630 aa18.28■□□□□ 0.52
LINC01554-201ENST00000357880 NNTQ13423 1086 aa18.28■□□□□ 0.52
LINC01554-201ENST00000357880 FAM133BQ5BKY9 247 aaKnown RBP18.28■□□□□ 0.52
LINC01554-201ENST00000357880 NADSYN1Q6IA69 706 aa18.28■□□□□ 0.52
LINC01554-201ENST00000357880 OLFML1Q6UWY5 402 aa18.28■□□□□ 0.52
LINC01554-201ENST00000357880 RASSF3Q86WH2 238 aa18.28■□□□□ 0.52
LINC01554-201ENST00000357880 CHPFQ8IZ52 775 aa18.28■□□□□ 0.52
LINC01554-201ENST00000357880 DEFB106AQ8N104 65 aa18.28■□□□□ 0.52
LINC01554-201ENST00000357880 FAM160A2Q8N612 972 aaPredicted RBP18.28■□□□□ 0.52
LINC01554-201ENST00000357880 TMEM35BQ8NCS4 154 aa18.28■□□□□ 0.52
LINC01554-201ENST00000357880 SLC39A13Q96H72 371 aa18.28■□□□□ 0.52
LINC01554-201ENST00000357880 POLMQ9NP87 494 aaPredicted RBP18.28■□□□□ 0.52
LINC01554-201ENST00000357880 GVINP1Q7Z2Y8 2422 aa18.28■□□□□ 0.52
LINC01554-201ENST00000357880 TCRBV21S2A2A0A5A6 115 aa18.27■□□□□ 0.52
LINC01554-201ENST00000357880 IRAK2O43187 625 aa18.27■□□□□ 0.52
LINC01554-201ENST00000357880 ALDH1A2O94788 518 aa18.27■□□□□ 0.52
LINC01554-201ENST00000357880 MOCS2O96007 188 aaPredicted RBP18.27■□□□□ 0.52
LINC01554-201ENST00000357880 GLI1P08151 1106 aa18.27■□□□□ 0.52
LINC01554-201ENST00000357880 HOXB2P14652 356 aa18.27■□□□□ 0.52
LINC01554-201ENST00000357880 CDH5P33151 784 aaPredicted RBP18.27■□□□□ 0.52
LINC01554-201ENST00000357880 JAM2P57087 298 aa18.27■□□□□ 0.52
LINC01554-201ENST00000357880 SNX16P57768 344 aa18.27■□□□□ 0.52
LINC01554-201ENST00000357880 ZC3H12AQ5D1E8 599 aaKnown RBP18.27■□□□□ 0.52
LINC01554-201ENST00000357880 EFHC1Q5JVL4 640 aa18.27■□□□□ 0.52
LINC01554-201ENST00000357880 PIK3R6Q5UE93 754 aa18.27■□□□□ 0.52
LINC01554-201ENST00000357880 CACNA2D4Q7Z3S7 1137 aa18.27■□□□□ 0.52
LINC01554-201ENST00000357880 DHX40Q8IX18 779 aaKnown RBP18.27■□□□□ 0.52
LINC01554-201ENST00000357880 NEK11Q8NG66 645 aa18.27■□□□□ 0.52
LINC01554-201ENST00000357880 EPS8L1Q8TE68 723 aa18.27■□□□□ 0.52
LINC01554-201ENST00000357880 IPO4Q8TEX9 1081 aaKnown RBP18.27■□□□□ 0.52
LINC01554-201ENST00000357880 SLC20A1Q8WUM9 679 aa18.27■□□□□ 0.52
LINC01554-201ENST00000357880 HMGB4Q8WW32 186 aa18.27■□□□□ 0.52
LINC01554-201ENST00000357880 AZIN2Q96A70 460 aa18.27■□□□□ 0.52
LINC01554-201ENST00000357880 SLC2A13Q96QE2 648 aa18.27■□□□□ 0.52
LINC01554-201ENST00000357880 BPIFA3Q9BQP9 254 aa18.27■□□□□ 0.52
LINC01554-201ENST00000357880 SLC2A11Q9BYW1 496 aa18.27■□□□□ 0.52
LINC01554-201ENST00000357880 ASNSD1Q9NWL6 643 aa18.27■□□□□ 0.52
LINC01554-201ENST00000357880 CACNA2D2Q9NY47 1150 aa18.27■□□□□ 0.52
LINC01554-201ENST00000357880 BCCIPQ9P287 314 aaKnown RBP eCLIP18.27■□□□□ 0.52
LINC01554-201ENST00000357880 XPO7Q9UIA9 1087 aaKnown RBP18.27■□□□□ 0.52
LINC01554-201ENST00000357880 SYNJ2BP-COX16A0A087WUM0 186 aa18.26■□□□□ 0.51
LINC01554-201ENST00000357880 WASH3PC4AMC7 463 aa18.26■□□□□ 0.51
LINC01554-201ENST00000357880 TBL1XO60907 577 aa18.26■□□□□ 0.51
LINC01554-201ENST00000357880 HSF2BPO75031 334 aa18.26■□□□□ 0.51
LINC01554-201ENST00000357880 IGLV3-25P01717 112 aa18.26■□□□□ 0.51
LINC01554-201ENST00000357880 RETP07949 1114 aa18.26■□□□□ 0.51
LINC01554-201ENST00000357880 SOX5P35711 763 aa18.26■□□□□ 0.51
LINC01554-201ENST00000357880 ZNF445P59923 1031 aa18.26■□□□□ 0.51
LINC01554-201ENST00000357880 CDK17Q00537 523 aa18.26■□□□□ 0.51
LINC01554-201ENST00000357880 SLC6A3Q01959 620 aa18.26■□□□□ 0.51
LINC01554-201ENST00000357880 USP39Q53GS9 565 aaKnown RBP18.26■□□□□ 0.51
LINC01554-201ENST00000357880 C2CD6Q53TS8 623 aa18.26■□□□□ 0.51
LINC01554-201ENST00000357880 TMEM215Q68D42 235 aa18.26■□□□□ 0.51
LINC01554-201ENST00000357880 SDE2Q6IQ49 451 aa18.26■□□□□ 0.51
LINC01554-201ENST00000357880 ANKS1BQ7Z6G8 1248 aa18.26■□□□□ 0.51
LINC01554-201ENST00000357880 PGBD3Q8N328 593 aa18.26■□□□□ 0.51
LINC01554-201ENST00000357880 CPA5Q8WXQ8 436 aa18.26■□□□□ 0.51
LINC01554-201ENST00000357880 MYEOVQ96EZ4 313 aa18.26■□□□□ 0.51
LINC01554-201ENST00000357880 SPAG5Q96R06 1193 aa18.26■□□□□ 0.51
LINC01554-201ENST00000357880 NUCKS1Q9H1E3 243 aaKnown RBP18.26■□□□□ 0.51
LINC01554-201ENST00000357880 FAM204AQ9H8W3 233 aa18.26■□□□□ 0.51
LINC01554-201ENST00000357880 COX16Q9P0S2 106 aa18.26■□□□□ 0.51
LINC01554-201ENST00000357880 STIM2Q9P246 746 aa18.26■□□□□ 0.51
LINC01554-201ENST00000357880 RAD54BQ9Y620 910 aa18.26■□□□□ 0.51
LINC01554-201ENST00000357880 A0A1W2PQF6 199 aa18.25■□□□□ 0.51
LINC01554-201ENST00000357880 SMTNL1A8MU46 457 aa18.25■□□□□ 0.51
LINC01554-201ENST00000357880 APOEP02649 317 aa18.25■□□□□ 0.51
LINC01554-201ENST00000357880 HLA-FP30511 346 aa18.25■□□□□ 0.51
LINC01554-201ENST00000357880 ZNF165P49910 485 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms