RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 PTPN9P43378 593 aa18.26■□□□□ 0.51
RTN4-204ENST00000357732 CDK7P50613 346 aa18.26■□□□□ 0.51
RTN4-204ENST00000357732 SLC6A3Q01959 620 aa18.26■□□□□ 0.51
RTN4-204ENST00000357732 ORC1Q13415 861 aa18.26■□□□□ 0.51
RTN4-204ENST00000357732 NOL9Q5SY16 702 aaKnown RBP18.26■□□□□ 0.51
RTN4-204ENST00000357732 SCYL2Q6P3W7 929 aa18.26■□□□□ 0.51
RTN4-204ENST00000357732 PGM2L1Q6PCE3 622 aa18.26■□□□□ 0.51
RTN4-204ENST00000357732 TMEM110Q86TL2 294 aa18.26■□□□□ 0.51
RTN4-204ENST00000357732 CDR2LQ86X02 465 aaPredicted RBP18.26■□□□□ 0.51
RTN4-204ENST00000357732 RIOX2Q8IUF8 465 aa18.26■□□□□ 0.51
RTN4-204ENST00000357732 OR6Y1Q8NGX8 325 aa18.26■□□□□ 0.51
RTN4-204ENST00000357732 NCSTNQ92542 709 aa18.26■□□□□ 0.51
RTN4-204ENST00000357732 TTC1Q99614 292 aa18.26■□□□□ 0.51
RTN4-204ENST00000357732 GPR20Q99678 358 aa18.26■□□□□ 0.51
RTN4-204ENST00000357732 EBF4Q9BQW3 602 aa18.26■□□□□ 0.51
RTN4-204ENST00000357732 SLC4A5Q9BY07 1137 aa18.26■□□□□ 0.51
RTN4-204ENST00000357732 NGRNQ9NPE2 291 aaKnown RBP18.26■□□□□ 0.51
RTN4-204ENST00000357732 MAP3K13O43283 966 aa18.25■□□□□ 0.51
RTN4-204ENST00000357732 PLIN3O60664 434 aa18.25■□□□□ 0.51
RTN4-204ENST00000357732 METTL18O95568 372 aa18.25■□□□□ 0.51
RTN4-204ENST00000357732 ACAT1P24752 427 aaKnown RBP18.25■□□□□ 0.51
RTN4-204ENST00000357732 CYP2F1P24903 491 aa18.25■□□□□ 0.51
RTN4-204ENST00000357732 RAB27AP51159 221 aa18.25■□□□□ 0.51
RTN4-204ENST00000357732 ASPHQ12797 758 aa18.25■□□□□ 0.51
RTN4-204ENST00000357732 UBAP2LQ14157 1087 aaKnown RBP18.25■□□□□ 0.51
RTN4-204ENST00000357732 LY6KQ17RY6 165 aa18.25■□□□□ 0.51
RTN4-204ENST00000357732 TRIM50Q86XT4 487 aa18.25■□□□□ 0.51
RTN4-204ENST00000357732 PDSS2Q86YH6 399 aa18.25■□□□□ 0.51
RTN4-204ENST00000357732 ST13P4Q8IZP2 240 aaPredicted RBP18.25■□□□□ 0.51
RTN4-204ENST00000357732 CLPTM1LQ96KA5 538 aa18.25■□□□□ 0.51
RTN4-204ENST00000357732 DMAP1Q9NPF5 467 aaPredicted RBP18.25■□□□□ 0.51
RTN4-204ENST00000357732 PPM1HQ9ULR3 514 aa18.25■□□□□ 0.51
RTN4-204ENST00000357732 DNAJC16Q9Y2G8 782 aa18.25■□□□□ 0.51
RTN4-204ENST00000357732 TBC1D30Q9Y2I9 924 aa18.25■□□□□ 0.51
RTN4-204ENST00000357732 SOWAHBA6NEL2 793 aa18.25■□□□□ 0.51
RTN4-204ENST00000357732 B4GALT5O43286 388 aa18.25■□□□□ 0.51
RTN4-204ENST00000357732 BAG2O95816 211 aa18.25■□□□□ 0.51
RTN4-204ENST00000357732 NDST1P52848 882 aa18.25■□□□□ 0.51
RTN4-204ENST00000357732 RBP5P82980 135 aa18.25■□□□□ 0.51
RTN4-204ENST00000357732 DEUP1Q05D60 604 aa18.25■□□□□ 0.51
RTN4-204ENST00000357732 MDH1BQ5I0G3 518 aa18.25■□□□□ 0.51
RTN4-204ENST00000357732 HEATR6Q6AI08 1181 aaKnown RBP18.25■□□□□ 0.51
RTN4-204ENST00000357732 LBX2Q6XYB7 198 aa18.25■□□□□ 0.51
RTN4-204ENST00000357732 IFNLR1Q8IU57 520 aaPredicted RBP18.25■□□□□ 0.51
RTN4-204ENST00000357732 PHC3Q8NDX5 983 aa18.25■□□□□ 0.51
RTN4-204ENST00000357732 ZNF395Q9H8N7 513 aaPredicted RBP18.25■□□□□ 0.51
RTN4-204ENST00000357732 PIDD1Q9HB75 910 aa18.25■□□□□ 0.51
RTN4-204ENST00000357732 ZSWIM8A7E2V4 1837 aa18.24■□□□□ 0.51
RTN4-204ENST00000357732 PEX1O43933 1283 aa18.24■□□□□ 0.51
RTN4-204ENST00000357732 SIN3BO75182 1162 aa18.24■□□□□ 0.51
RTN4-204ENST00000357732 CAPN15O75808 1086 aa18.24■□□□□ 0.51
RTN4-204ENST00000357732 MYCNP04198 464 aaPredicted RBP18.24■□□□□ 0.51
RTN4-204ENST00000357732 PFKMP08237 780 aa18.24■□□□□ 0.51
RTN4-204ENST00000357732 C6orf222P0C671 652 aaPredicted RBP18.24■□□□□ 0.51
RTN4-204ENST00000357732 PHKA2P46019 1235 aa18.24■□□□□ 0.51
RTN4-204ENST00000357732 CLCN2P51788 898 aa18.24■□□□□ 0.51
RTN4-204ENST00000357732 PKDCCQ504Y2 493 aa18.24■□□□□ 0.51
RTN4-204ENST00000357732 TREML2Q5T2D2 321 aa18.24■□□□□ 0.51
RTN4-204ENST00000357732 MAP1SQ66K74 1059 aaPredicted RBP18.24■□□□□ 0.51
RTN4-204ENST00000357732 LRRC8BQ6P9F7 803 aa18.24■□□□□ 0.51
RTN4-204ENST00000357732 SDCCAG8Q86SQ7 713 aaPredicted RBP18.24■□□□□ 0.51
RTN4-204ENST00000357732 BTBD7Q9P203 1132 aa18.24■□□□□ 0.51
RTN4-204ENST00000357732 EMCNQ9ULC0 261 aa18.24■□□□□ 0.51
RTN4-204ENST00000357732 UTRNP46939 3433 aa18.24■□□□□ 0.51
RTN4-204ENST00000357732 A6NJR5 290 aa18.24■□□□□ 0.51
RTN4-204ENST00000357732 GPR25O00155 361 aa18.24■□□□□ 0.51
RTN4-204ENST00000357732 HBP1O60381 514 aa18.24■□□□□ 0.51
RTN4-204ENST00000357732 GJB1P08034 283 aa18.24■□□□□ 0.51
RTN4-204ENST00000357732 CYP3A5P20815 502 aa18.24■□□□□ 0.51
RTN4-204ENST00000357732 HARS2P49590 506 aaKnown RBP18.24■□□□□ 0.51
RTN4-204ENST00000357732 TMEM132DQ14C87 1099 aa18.24■□□□□ 0.51
RTN4-204ENST00000357732 N4BP2L1Q5TBK1 243 aaPredicted RBP18.24■□□□□ 0.51
RTN4-204ENST00000357732 PACS1Q6VY07 963 aa18.24■□□□□ 0.51
RTN4-204ENST00000357732 RFX8Q6ZV50 586 aa18.24■□□□□ 0.51
RTN4-204ENST00000357732 TMEM192Q8IY95 271 aa18.24■□□□□ 0.51
RTN4-204ENST00000357732 PIWIL1Q96J94 861 aaKnown RBP18.24■□□□□ 0.51
RTN4-204ENST00000357732 APOL6Q9BWW8 343 aa18.24■□□□□ 0.51
RTN4-204ENST00000357732 RCOR3Q9P2K3 495 aaPredicted RBP18.24■□□□□ 0.51
RTN4-204ENST00000357732 ARHGAP42A6NI28 874 aa18.23■□□□□ 0.51
RTN4-204ENST00000357732 NOP56O00567 594 aaKnown RBP18.23■□□□□ 0.51
RTN4-204ENST00000357732 RTN3O95197 1032 aaPredicted RBP18.23■□□□□ 0.51
RTN4-204ENST00000357732 ALDOAP04075 364 aaKnown RBP18.23■□□□□ 0.51
RTN4-204ENST00000357732 PGAM1P18669 254 aa18.23■□□□□ 0.51
RTN4-204ENST00000357732 HDAC4P56524 1084 aa18.23■□□□□ 0.51
RTN4-204ENST00000357732 CCDC153Q494R4 210 aa18.23■□□□□ 0.51
RTN4-204ENST00000357732 RAB6CQ53S08 254 aa18.23■□□□□ 0.51
RTN4-204ENST00000357732 FSCBQ5H9T9 825 aa18.23■□□□□ 0.51
RTN4-204ENST00000357732 APOBEC3FQ8IUX4 373 aaKnown RBP18.23■□□□□ 0.51
RTN4-204ENST00000357732 MPP5Q8N3R9 675 aa18.23■□□□□ 0.51
RTN4-204ENST00000357732 CENPIQ92674 756 aaPredicted RBP18.23■□□□□ 0.51
RTN4-204ENST00000357732 ZNF778Q96MU6 729 aa18.23■□□□□ 0.51
RTN4-204ENST00000357732 FERMT1Q9BQL6 677 aa18.23■□□□□ 0.51
RTN4-204ENST00000357732 KLHL4Q9C0H6 718 aa18.23■□□□□ 0.51
RTN4-204ENST00000357732 RAB6CQ9H0N0 254 aa18.23■□□□□ 0.51
RTN4-204ENST00000357732 VCX3AQ9NNX9 186 aa18.23■□□□□ 0.51
RTN4-204ENST00000357732 A0A0A0MRY4 1105 aa18.23■□□□□ 0.51
RTN4-204ENST00000357732 KLHL33A6NCF5 533 aa18.23■□□□□ 0.51
RTN4-204ENST00000357732 CASQ2O14958 399 aaPredicted RBP18.23■□□□□ 0.51
RTN4-204ENST00000357732 UBTFL6P0CB48 400 aaPredicted RBP18.23■□□□□ 0.51
RTN4-204ENST00000357732 MX2P20592 715 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms