RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 TMEM25Q86YD3 366 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 ZDHHC17Q8IUH5 632 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 ZNF683Q8IZ20 524 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 CCDC112Q8NEF3 446 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 WFDC5Q8TCV5 224 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 IGSF8Q969P0 613 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 NACA2Q9H009 215 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 TKTL2Q9H0I9 626 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 SIK2Q9H0K1 926 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 KCNK12Q9HB15 430 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 SMARCAL1Q9NZC9 954 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 EHD2Q9NZN4 543 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 CFAP97Q9P2B7 532 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 CDH7Q9ULB5 785 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 NUMBLQ9Y6R0 609 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 TCRBV7S2A1N4TA0A589 114 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 C3orf70A6NLC5 250 aaPredicted RBP4.18□□□□□ -1.74
LIG4-201ENST00000356922 MYO1FO00160 1098 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 ARNTLO00327 626 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 GFRA2O00451 464 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 TSPAN3O60637 253 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 MTA2O94776 668 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 PROSCO94903 275 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 MAP3K6O95382 1288 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 GLI1P08151 1106 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 CCDC175P0C221 793 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 RARAP10276 462 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 ARSAP15289 507 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 CXCR5P32302 372 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 PTPN9P43378 593 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 SOX9P48436 509 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 NAP1L1P55209 391 aaKnown RBP4.18□□□□□ -1.74
LIG4-201ENST00000356922 RPS24P62847 133 aaKnown RBP4.18□□□□□ -1.74
LIG4-201ENST00000356922 SLC7A9P82251 487 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 KIF5AQ12840 1032 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 TRIP4Q15650 581 aaPredicted RBP4.18□□□□□ -1.74
LIG4-201ENST00000356922 AAK1Q2M2I8 961 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 GAB4Q2WGN9 574 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 FSCBQ5H9T9 825 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 ASTLQ6HA08 431 aaPredicted RBP4.18□□□□□ -1.74
LIG4-201ENST00000356922 MSANTD2Q6P1R3 559 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 Q6ZNB5 142 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 ARCQ7LC44 396 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 NT5DC3Q86UY8 548 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 ELMOD1Q8N336 334 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 MRPS31Q92665 395 aaKnown RBP4.18□□□□□ -1.74
LIG4-201ENST00000356922 PGAP3Q96FM1 320 aaPredicted RBP4.18□□□□□ -1.74
LIG4-201ENST00000356922 CEP295NLQ96MC4 621 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 PRMT1Q99873 361 aaKnown RBP4.18□□□□□ -1.74
LIG4-201ENST00000356922 CNPY3Q9BT09 278 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 TLR10Q9BXR5 811 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 ZWILCHQ9H900 591 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 MPP6Q9NZW5 540 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 WDR35Q9P2L0 1181 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 SAE1Q9UBE0 346 aaPredicted RBP4.18□□□□□ -1.74
LIG4-201ENST00000356922 DNMT3LQ9UJW3 386 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 INTUQ9ULD6 942 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 STRIP2Q9ULQ0 834 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 NR2E1Q9Y466 385 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 HS3ST4Q9Y661 456 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 HEPACAM2A8MVW5 462 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 SRGAP2O75044 1071 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 PAGE1O75459 146 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 POU2F2P09086 479 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 CD72P21854 359 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 CDC25CP30307 473 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 CORO1AP31146 461 aaKnown RBP4.18□□□□□ -1.74
LIG4-201ENST00000356922 SDC4P31431 198 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 ADRA1BP35368 520 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 AVPR1AP37288 418 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 KRT83P78385 493 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 DEUP1Q05D60 604 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 ZNF77Q15935 545 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 ALFQ53S48 1182 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 MS4A13Q5J8X5 152 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 ZFYVE27Q5T4F4 411 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 SMYD5Q6GMV2 418 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 KLHDC10Q6PID8 442 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 RHBDF2Q6PJF5 856 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 TPGS1Q6ZTW0 290 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 RTL10Q7L3V2 364 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 DAAM2Q86T65 1068 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 C12orf40Q86WS4 652 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 SLC44A3Q8N4M1 653 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 ZNF276Q8N554 614 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 OVCA2Q8WZ82 227 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 SMARCD2Q92925 531 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 PRICKLE1Q96MT3 831 aaPredicted RBP4.18□□□□□ -1.74
LIG4-201ENST00000356922 FAM83CQ9BQN1 747 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 EBF3Q9H4W6 596 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 WDCPQ9H6R7 721 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 ZDHHC4Q9NPG8 344 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 HPS4Q9NQG7 708 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 ASNSD1Q9NWL6 643 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 USP18Q9UMW8 372 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 TLR6Q9Y2C9 796 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 ZKSCAN5Q9Y2L8 839 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 ACTL7AQ9Y615 435 aa4.18□□□□□ -1.74
LIG4-201ENST00000356922 MYO18AQ92614 2054 aaKnown RBP4.18□□□□□ -1.74
LIG4-201ENST00000356922 BTNL10A8MVZ5 291 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms