RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 VCPP55072 806 aaKnown RBP23.01■■□□□ 1.27
SHMT1-203ENST00000354098 FNIP1Q8TF40 1166 aa23.01■■□□□ 1.27
SHMT1-203ENST00000354098 WDCPQ9H6R7 721 aa23.01■■□□□ 1.27
SHMT1-203ENST00000354098 UVRAGQ9P2Y5 699 aa23.01■■□□□ 1.27
SHMT1-203ENST00000354098 ZNF510Q9Y2H8 683 aa23.01■■□□□ 1.27
SHMT1-203ENST00000354098 APOEP02649 317 aa23■■□□□ 1.27
SHMT1-203ENST00000354098 PTMAP06454 111 aaKnown RBP23■■□□□ 1.27
SHMT1-203ENST00000354098 RUNX3Q13761 415 aa23■■□□□ 1.27
SHMT1-203ENST00000354098 PPP2R5DQ14738 602 aa23■■□□□ 1.27
SHMT1-203ENST00000354098 DAB2IPQ5VWQ8 1189 aa23■■□□□ 1.27
SHMT1-203ENST00000354098 NADSYN1Q6IA69 706 aa23■■□□□ 1.27
SHMT1-203ENST00000354098 RHBDF2Q6PJF5 856 aa23■■□□□ 1.27
SHMT1-203ENST00000354098 SND1Q7KZF4 910 aaKnown RBP eCLIP23■■□□□ 1.27
SHMT1-203ENST00000354098 ARFGAP1Q8N6T3 406 aa23■■□□□ 1.27
SHMT1-203ENST00000354098 TKTL2Q9H0I9 626 aa23■■□□□ 1.27
SHMT1-203ENST00000354098 A0A0U1RQJ8 604 aa23■■□□□ 1.27
SHMT1-203ENST00000354098 TRDMT1O14717 391 aaKnown RBP23■■□□□ 1.27
SHMT1-203ENST00000354098 ARHGAP6O43182 974 aa23■■□□□ 1.27
SHMT1-203ENST00000354098 ACSL4O60488 711 aa23■■□□□ 1.27
SHMT1-203ENST00000354098 SLC2A3P11169 496 aa23■■□□□ 1.27
SHMT1-203ENST00000354098 TMEM25Q86YD3 366 aa23■■□□□ 1.27
SHMT1-203ENST00000354098 ATRIPQ8WXE1 791 aa23■■□□□ 1.27
SHMT1-203ENST00000354098 ATP2A3Q93084 1043 aa23■■□□□ 1.27
SHMT1-203ENST00000354098 OTUB2Q96DC9 234 aa23■■□□□ 1.27
SHMT1-203ENST00000354098 P2RY11Q96G91 374 aa23■■□□□ 1.27
SHMT1-203ENST00000354098 ZNF830Q96NB3 372 aaPredicted RBP23■■□□□ 1.27
SHMT1-203ENST00000354098 ECT2Q9H8V3 914 aa23■■□□□ 1.27
SHMT1-203ENST00000354098 ARHGEF38Q9NXL2 777 aa23■■□□□ 1.27
SHMT1-203ENST00000354098 STOML2Q9UJZ1 356 aa23■■□□□ 1.27
SHMT1-203ENST00000354098 CYP17A1P05093 508 aa22.99■■□□□ 1.27
SHMT1-203ENST00000354098 SLC6A4P31645 630 aa22.99■■□□□ 1.27
SHMT1-203ENST00000354098 SLC11A2P49281 568 aa22.99■■□□□ 1.27
SHMT1-203ENST00000354098 DHCR24Q15392 516 aa22.99■■□□□ 1.27
SHMT1-203ENST00000354098 FAM133BQ5BKY9 247 aaKnown RBP22.99■■□□□ 1.27
SHMT1-203ENST00000354098 ADGRF1Q5T601 910 aa22.99■■□□□ 1.27
SHMT1-203ENST00000354098 TPGS1Q6ZTW0 290 aa22.99■■□□□ 1.27
SHMT1-203ENST00000354098 ATP6V0D2Q8N8Y2 350 aa22.99■■□□□ 1.27
SHMT1-203ENST00000354098 RFFLQ8WZ73 363 aa22.99■■□□□ 1.27
SHMT1-203ENST00000354098 AZIN2Q96A70 460 aa22.99■■□□□ 1.27
SHMT1-203ENST00000354098 BTN2A3PQ96KV6 586 aa22.99■■□□□ 1.27
SHMT1-203ENST00000354098 LACRTQ9GZZ8 138 aa22.99■■□□□ 1.27
SHMT1-203ENST00000354098 LUC7LQ9NQ29 371 aaKnown RBP22.99■■□□□ 1.27
SHMT1-203ENST00000354098 TRPV5Q9NQA5 729 aa22.99■■□□□ 1.27
SHMT1-203ENST00000354098 HEBP1Q9NRV9 189 aa22.99■■□□□ 1.27
SHMT1-203ENST00000354098 MYO1FO00160 1098 aa22.98■■□□□ 1.27
SHMT1-203ENST00000354098 SOX9P48436 509 aa22.98■■□□□ 1.27
SHMT1-203ENST00000354098 KRT83P78385 493 aa22.98■■□□□ 1.27
SHMT1-203ENST00000354098 BRMS1LQ5PSV4 323 aa22.98■■□□□ 1.27
SHMT1-203ENST00000354098 LY6G5CQ5SRR4 150 aa22.98■■□□□ 1.27
SHMT1-203ENST00000354098 SCYL2Q6P3W7 929 aa22.98■■□□□ 1.27
SHMT1-203ENST00000354098 RFWD3Q6PCD5 774 aa22.98■■□□□ 1.27
SHMT1-203ENST00000354098 RHOT2Q8IXI1 618 aa22.98■■□□□ 1.27
SHMT1-203ENST00000354098 FAM217AQ8IXS0 508 aa22.98■■□□□ 1.27
SHMT1-203ENST00000354098 UBALD2Q8IYN6 164 aa22.98■■□□□ 1.27
SHMT1-203ENST00000354098 CCDC185Q8N715 623 aa22.98■■□□□ 1.27
SHMT1-203ENST00000354098 CSGALNACT1Q8TDX6 532 aa22.98■■□□□ 1.27
SHMT1-203ENST00000354098 DNASE1L2Q92874 299 aa22.98■■□□□ 1.27
SHMT1-203ENST00000354098 KCNF1Q9H3M0 494 aa22.98■■□□□ 1.27
SHMT1-203ENST00000354098 SPHK2Q9NRA0 654 aa22.98■■□□□ 1.27
SHMT1-203ENST00000354098 ADGRG1Q9Y653 693 aa22.98■■□□□ 1.27
SHMT1-203ENST00000354098 DUSP10Q9Y6W6 482 aa22.98■■□□□ 1.27
SHMT1-203ENST00000354098 BDP1A6H8Y1 2624 aa22.97■■□□□ 1.27
SHMT1-203ENST00000354098 TSPAN3O60637 253 aa22.97■■□□□ 1.27
SHMT1-203ENST00000354098 PAGE1O75459 146 aa22.97■■□□□ 1.27
SHMT1-203ENST00000354098 NFATC1O95644 943 aa22.97■■□□□ 1.27
SHMT1-203ENST00000354098 LATS1O95835 1130 aa22.97■■□□□ 1.27
SHMT1-203ENST00000354098 GGCXP38435 758 aa22.97■■□□□ 1.27
SHMT1-203ENST00000354098 VAV2P52735 878 aa22.97■■□□□ 1.27
SHMT1-203ENST00000354098 ZXDAP98168 799 aa22.97■■□□□ 1.27
SHMT1-203ENST00000354098 PFKPQ01813 784 aa22.97■■□□□ 1.27
SHMT1-203ENST00000354098 ITPRIPL2Q3MIP1 535 aa22.97■■□□□ 1.27
SHMT1-203ENST00000354098 PIK3R6Q5UE93 754 aa22.97■■□□□ 1.27
SHMT1-203ENST00000354098 CPNE8Q86YQ8 564 aa22.97■■□□□ 1.27
SHMT1-203ENST00000354098 BHMTQ93088 406 aa22.97■■□□□ 1.27
SHMT1-203ENST00000354098 MYEOVQ96EZ4 313 aa22.97■■□□□ 1.27
SHMT1-203ENST00000354098 MAGEB5Q9BZ81 275 aa22.97■■□□□ 1.27
SHMT1-203ENST00000354098 IP6K2Q9UHH9 426 aa22.97■■□□□ 1.27
SHMT1-203ENST00000354098 SLC12A6Q9UHW9 1150 aa22.97■■□□□ 1.27
SHMT1-203ENST00000354098 SALL4Q9UJQ4 1053 aa22.97■■□□□ 1.27
SHMT1-203ENST00000354098 TRIOO75962 3097 aa22.97■■□□□ 1.27
SHMT1-203ENST00000354098 TICRRQ7Z2Z1 1910 aa22.97■■□□□ 1.27
SHMT1-203ENST00000354098 CHKAP35790 457 aa22.97■■□□□ 1.27
SHMT1-203ENST00000354098 CCDC173Q0VFZ6 552 aa22.97■■□□□ 1.27
SHMT1-203ENST00000354098 TCEAL1Q15170 157 aa22.97■■□□□ 1.27
SHMT1-203ENST00000354098 SLC44A4Q53GD3 710 aa22.97■■□□□ 1.27
SHMT1-203ENST00000354098 MS4A13Q5J8X5 152 aa22.97■■□□□ 1.27
SHMT1-203ENST00000354098 RAP1GAP2Q684P5 730 aa22.97■■□□□ 1.27
SHMT1-203ENST00000354098 KIAA1328Q86T90 577 aa22.97■■□□□ 1.27
SHMT1-203ENST00000354098 CPA6Q8N4T0 437 aa22.97■■□□□ 1.27
SHMT1-203ENST00000354098 PPP1R9BQ96SB3 815 aa22.97■■□□□ 1.27
SHMT1-203ENST00000354098 COL25A1Q9BXS0 654 aaPredicted RBP22.97■■□□□ 1.27
SHMT1-203ENST00000354098 CA14Q9ULX7 337 aa22.97■■□□□ 1.27
SHMT1-203ENST00000354098 PAXBP1Q9Y5B6 917 aa22.97■■□□□ 1.27
SHMT1-203ENST00000354098 SNX10Q9Y5X0 201 aa22.97■■□□□ 1.27
SHMT1-203ENST00000354098 HS3ST4Q9Y661 456 aa22.97■■□□□ 1.27
SHMT1-203ENST00000354098 COL4A3Q01955 1670 aa22.96■■□□□ 1.27
SHMT1-203ENST00000354098 COL4A2P08572 1712 aa22.96■■□□□ 1.27
SHMT1-203ENST00000354098 TTC28Q96AY4 2481 aa22.96■■□□□ 1.27
SHMT1-203ENST00000354098 LRCH4O75427 683 aa22.96■■□□□ 1.27
SHMT1-203ENST00000354098 RNF8O76064 485 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms