RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 HECTD3Q5T447 861 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 EXOC2Q96KP1 924 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 HSFY1Q96LI6 401 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 SERPINI1Q99574 410 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 LPIN3Q9BQK8 851 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 TM6SF2Q9BZW4 377 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 DPEP3Q9H4B8 488 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 HEATR9A2RTY3 570 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 ERBB2P04626 1255 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 SPIRE1Q08AE8 756 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 TCEA2Q15560 299 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 C1orf146Q5VVC0 180 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 C12orf56Q8IXR9 622 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 C7orf61Q8IZ16 206 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 LRRC43Q8N309 656 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 PPP1R2P1Q96PQ5 205 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 PLK2Q9NYY3 685 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 TRMT6Q9UJA5 497 aaKnown RBP14.09□□□□□ -0.15
SMC6-201ENST00000351948 GRID1Q9ULK0 1009 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 SETD1AO15047 1707 aaKnown RBP14.09□□□□□ -0.15
SMC6-201ENST00000351948 SYNCRIPO60506 623 aaKnown RBP14.09□□□□□ -0.15
SMC6-201ENST00000351948 UROC1Q96N76 676 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 TUBB6Q9BUF5 446 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 RRN3Q9NYV6 651 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 RGS17Q9UGC6 210 aaPredicted RBP14.09□□□□□ -0.15
SMC6-201ENST00000351948 ZNF112Q9UJU3 913 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 SLC13A4Q9UKG4 626 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 KDM3BQ7LBC6 1761 aa14.08□□□□□ -0.15
SMC6-201ENST00000351948 DUOX1Q9NRD9 1551 aa14.08□□□□□ -0.15
SMC6-201ENST00000351948 ARL5CA6NH57 179 aa14.08□□□□□ -0.16
SMC6-201ENST00000351948 OPLAHO14841 1288 aa14.08□□□□□ -0.16
SMC6-201ENST00000351948 NOL4O94818 638 aa14.08□□□□□ -0.16
SMC6-201ENST00000351948 RENBPP51606 427 aa14.08□□□□□ -0.16
SMC6-201ENST00000351948 HSP90AA5PQ58FG0 334 aa14.08□□□□□ -0.16
SMC6-201ENST00000351948 TTPALQ9BTX7 342 aa14.08□□□□□ -0.16
SMC6-201ENST00000351948 FUT8Q9BYC5 575 aa14.08□□□□□ -0.16
SMC6-201ENST00000351948 REXO2Q9Y3B8 237 aaKnown RBP14.08□□□□□ -0.16
SMC6-201ENST00000351948 MRPS23Q9Y3D9 190 aaKnown RBP14.08□□□□□ -0.16
SMC6-201ENST00000351948 LOC100653049A0A140TA62 436 aa14.08□□□□□ -0.16
SMC6-201ENST00000351948 KPNA3O00505 521 aaPredicted RBP14.08□□□□□ -0.16
SMC6-201ENST00000351948 SKAP2O75563 359 aaPredicted RBP14.08□□□□□ -0.16
SMC6-201ENST00000351948 KRT34O76011 436 aa14.08□□□□□ -0.16
SMC6-201ENST00000351948 CYP1A2P05177 515 aa14.08□□□□□ -0.16
SMC6-201ENST00000351948 SLC10A6Q3KNW5 377 aa14.08□□□□□ -0.16
SMC6-201ENST00000351948 ANKRD20A8PQ5CZ79 823 aa14.08□□□□□ -0.16
SMC6-201ENST00000351948 NUP93Q8N1F7 819 aa14.08□□□□□ -0.16
SMC6-201ENST00000351948 ROPN1BQ9BZX4 212 aaPredicted RBP14.08□□□□□ -0.16
SMC6-201ENST00000351948 SLC7A5P2Q9GIP4 190 aa14.08□□□□□ -0.16
SMC6-201ENST00000351948 ROPN1Q9HAT0 212 aaPredicted RBP14.08□□□□□ -0.16
SMC6-201ENST00000351948 MPP6Q9NZW5 540 aa14.08□□□□□ -0.16
SMC6-201ENST00000351948 DPP7Q9UHL4 492 aa14.08□□□□□ -0.16
SMC6-201ENST00000351948 A0A1B0GUA9 196 aa14.08□□□□□ -0.16
SMC6-201ENST00000351948 FRMD3A2A2Y4 597 aa14.08□□□□□ -0.16
SMC6-201ENST00000351948 SUPT7LO94864 414 aa14.08□□□□□ -0.16
SMC6-201ENST00000351948 RASAL3Q86YV0 1011 aa14.08□□□□□ -0.16
SMC6-201ENST00000351948 ARID3BQ8IVW6 561 aaPredicted RBP14.08□□□□□ -0.16
SMC6-201ENST00000351948 B3GALT6Q96L58 329 aa14.08□□□□□ -0.16
SMC6-201ENST00000351948 FRMD8P1Q9BZ68 369 aaPredicted RBP14.08□□□□□ -0.16
SMC6-201ENST00000351948 WWP1Q9H0M0 922 aa14.08□□□□□ -0.16
SMC6-201ENST00000351948 UPF3AQ9H1J1 476 aaKnown RBP14.08□□□□□ -0.16
SMC6-201ENST00000351948 EML4Q9HC35 981 aaKnown RBP14.08□□□□□ -0.16
SMC6-201ENST00000351948 GABRQQ9UN88 632 aa14.08□□□□□ -0.16
SMC6-201ENST00000351948 TLR5O60602 858 aa14.08□□□□□ -0.16
SMC6-201ENST00000351948 VAPBO95292 243 aa14.08□□□□□ -0.16
SMC6-201ENST00000351948 LSP1P33241 339 aa14.08□□□□□ -0.16
SMC6-201ENST00000351948 ZCWPW2Q504Y3 356 aa14.08□□□□□ -0.16
SMC6-201ENST00000351948 MSL3Q8N5Y2 521 aaKnown RBP14.08□□□□□ -0.16
SMC6-201ENST00000351948 APOC4-APOC2K7ER74 178 aa14.07□□□□□ -0.16
SMC6-201ENST00000351948 DGKIO75912 1065 aa14.07□□□□□ -0.16
SMC6-201ENST00000351948 APOC2P02655 101 aa14.07□□□□□ -0.16
SMC6-201ENST00000351948 SMAD3P84022 425 aaKnown RBP14.07□□□□□ -0.16
SMC6-201ENST00000351948 WDR93Q6P2C0 686 aa14.07□□□□□ -0.16
SMC6-201ENST00000351948 ADGRA3Q8IWK6 1321 aa14.07□□□□□ -0.16
SMC6-201ENST00000351948 GBP7Q8N8V2 638 aaPredicted RBP14.07□□□□□ -0.16
SMC6-201ENST00000351948 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.07□□□□□ -0.16
SMC6-201ENST00000351948 GRIN3AQ8TCU5 1115 aa14.07□□□□□ -0.16
SMC6-201ENST00000351948 SGSM3Q96HU1 749 aa14.07□□□□□ -0.16
SMC6-201ENST00000351948 MBOAT7Q96N66 472 aa14.07□□□□□ -0.16
SMC6-201ENST00000351948 LGMNQ99538 433 aa14.07□□□□□ -0.16
SMC6-201ENST00000351948 EFHD1Q9BUP0 239 aa14.07□□□□□ -0.16
SMC6-201ENST00000351948 OSGEPL1Q9H4B0 414 aa14.07□□□□□ -0.16
SMC6-201ENST00000351948 SRRDQ9UH36 339 aa14.07□□□□□ -0.16
SMC6-201ENST00000351948 MARSP56192 900 aaKnown RBP14.07□□□□□ -0.16
SMC6-201ENST00000351948 C11orf96Q7Z7L8 435 aa14.07□□□□□ -0.16
SMC6-201ENST00000351948 IFNEQ86WN2 208 aa14.07□□□□□ -0.16
SMC6-201ENST00000351948 E2F7Q96AV8 911 aa14.07□□□□□ -0.16
SMC6-201ENST00000351948 CDK5RAP1Q96SZ6 601 aaKnown RBP14.07□□□□□ -0.16
SMC6-201ENST00000351948 DUSP16Q9BY84 665 aa14.07□□□□□ -0.16
SMC6-201ENST00000351948 FRMD8Q9BZ67 464 aaPredicted RBP14.07□□□□□ -0.16
SMC6-201ENST00000351948 ECT2Q9H8V3 914 aa14.07□□□□□ -0.16
SMC6-201ENST00000351948 ASAH2Q9NR71 780 aa14.07□□□□□ -0.16
SMC6-201ENST00000351948 UXTQ9UBK9 157 aaPredicted RBP14.07□□□□□ -0.16
SMC6-201ENST00000351948 RUVBL2Q9Y230 463 aaKnown RBP14.07□□□□□ -0.16
SMC6-201ENST00000351948 ALS2Q96Q42 1657 aa14.07□□□□□ -0.16
SMC6-201ENST00000351948 MEFVO15553 781 aaPredicted RBP14.07□□□□□ -0.16
SMC6-201ENST00000351948 MYO1DO94832 1006 aa14.07□□□□□ -0.16
SMC6-201ENST00000351948 KATNAL2Q8IYT4 538 aa14.07□□□□□ -0.16
SMC6-201ENST00000351948 PWWP2AQ96N64 755 aa14.07□□□□□ -0.16
SMC6-201ENST00000351948 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.07□□□□□ -0.164e-8■□□□□ 9.9
SMC6-201ENST00000351948 RNF39Q9H2S5 420 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms