RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 ZNF720Q7Z2F6 126 aa13.63□□□□□ -0.23
IFT88-202ENST00000351808 PCGF5Q86SE9 256 aa13.63□□□□□ -0.23
IFT88-202ENST00000351808 SLC26A11Q86WA9 606 aa13.63□□□□□ -0.23
IFT88-202ENST00000351808 SNX29P2Q8IUI4 249 aa13.63□□□□□ -0.23
IFT88-202ENST00000351808 CPSF7Q8N684 471 aaKnown RBP13.63□□□□□ -0.23
IFT88-202ENST00000351808 ZSWIM2Q8NEG5 633 aa13.63□□□□□ -0.23
IFT88-202ENST00000351808 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.63□□□□□ -0.23
IFT88-202ENST00000351808 GABPB2Q8TAK5 448 aaPredicted RBP13.63□□□□□ -0.23
IFT88-202ENST00000351808 ATP6V1E2Q96A05 226 aa13.63□□□□□ -0.23
IFT88-202ENST00000351808 DOK1Q99704 481 aa13.63□□□□□ -0.23
IFT88-202ENST00000351808 HOMER2Q9NSB8 354 aa13.63□□□□□ -0.23
IFT88-202ENST00000351808 CTDP1Q9Y5B0 961 aaPredicted RBP13.63□□□□□ -0.23
IFT88-202ENST00000351808 SLC30A1Q9Y6M5 507 aa13.63□□□□□ -0.23
IFT88-202ENST00000351808 ZNFX1Q9P2E3 1918 aaKnown RBP13.63□□□□□ -0.23
IFT88-202ENST00000351808 KIAA1551Q9HCM1 1747 aa13.63□□□□□ -0.23
IFT88-202ENST00000351808 KRT37O76014 449 aa13.62□□□□□ -0.23
IFT88-202ENST00000351808 HNRNPFP52597 415 aaKnown RBP13.62□□□□□ -0.23
IFT88-202ENST00000351808 MFAP3P55082 362 aa13.62□□□□□ -0.23
IFT88-202ENST00000351808 RPL10AP62906 217 aaKnown RBP13.62□□□□□ -0.23
IFT88-202ENST00000351808 NFATC3Q12968 1075 aa13.62□□□□□ -0.23
IFT88-202ENST00000351808 CEACAM7Q14002 265 aa13.62□□□□□ -0.23
IFT88-202ENST00000351808 WDR45BQ5MNZ6 344 aa13.62□□□□□ -0.23
IFT88-202ENST00000351808 C1orf220Q5T0J3 134 aa13.62□□□□□ -0.23
IFT88-202ENST00000351808 GET4Q7L5D6 327 aaPredicted RBP13.62□□□□□ -0.23
IFT88-202ENST00000351808 CYP2U1Q7Z449 544 aa13.62□□□□□ -0.23
IFT88-202ENST00000351808 FAM178BQ8IXR5 827 aa13.62□□□□□ -0.23
IFT88-202ENST00000351808 SIX6OS1Q8N1H7 587 aa13.62□□□□□ -0.23
IFT88-202ENST00000351808 ZNF420Q8TAQ5 688 aaPredicted RBP13.62□□□□□ -0.23
IFT88-202ENST00000351808 SLITRK1Q96PX8 696 aa13.62□□□□□ -0.23
IFT88-202ENST00000351808 RNF38Q9H0F5 515 aa13.62□□□□□ -0.23
IFT88-202ENST00000351808 PCDH12Q9NPG4 1184 aa13.62□□□□□ -0.23
IFT88-202ENST00000351808 BCAP29Q9UHQ4 241 aa13.62□□□□□ -0.23
IFT88-202ENST00000351808 TESPA1A2RU30 521 aaPredicted RBP13.62□□□□□ -0.23
IFT88-202ENST00000351808 STX16-NPEPL1H3BU86 382 aa13.62□□□□□ -0.23
IFT88-202ENST00000351808 SNAP91O60641 907 aa13.62□□□□□ -0.23
IFT88-202ENST00000351808 FARP2O94887 1054 aaPredicted RBP13.62□□□□□ -0.23
IFT88-202ENST00000351808 KRT1P04264 644 aa13.62□□□□□ -0.23
IFT88-202ENST00000351808 SERPINB5P36952 375 aa13.62□□□□□ -0.23
IFT88-202ENST00000351808 SUSD4Q5VX71 490 aa13.62□□□□□ -0.23
IFT88-202ENST00000351808 TTC33Q6PID6 262 aaPredicted RBP13.62□□□□□ -0.23
IFT88-202ENST00000351808 BNC2Q6ZN30 1099 aaPredicted RBP13.62□□□□□ -0.23
IFT88-202ENST00000351808 DSELQ8IZU8 1212 aa13.62□□□□□ -0.23
IFT88-202ENST00000351808 CLIP4Q8N3C7 705 aa13.62□□□□□ -0.23
IFT88-202ENST00000351808 FAM156AQ8NDB6 213 aa13.62□□□□□ -0.23
IFT88-202ENST00000351808 LRTOMTQ8WZ04 291 aa13.62□□□□□ -0.23
IFT88-202ENST00000351808 SEMA4DQ92854 862 aa13.62□□□□□ -0.23
IFT88-202ENST00000351808 CIB1Q99828 191 aa13.62□□□□□ -0.23
IFT88-202ENST00000351808 RAB20Q9NX57 234 aa13.62□□□□□ -0.23
IFT88-202ENST00000351808 PCDHB2Q9Y5E7 798 aa13.62□□□□□ -0.23
IFT88-202ENST00000351808 KRT5P13647 590 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 KCNA4P22459 653 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 MAP4P27816 1152 aaKnown RBP13.61□□□□□ -0.23
IFT88-202ENST00000351808 RPL22P35268 128 aaKnown RBP13.61□□□□□ -0.23
IFT88-202ENST00000351808 GRIA3P42263 894 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 PIGGQ5H8A4 983 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 TATDN1Q6P1N9 297 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 ELMOD1Q8N336 334 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 UBR7Q8N806 425 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 ATP6V0D2Q8N8Y2 350 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 CFAP36Q96G28 342 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 ZNF641Q96N77 438 aaPredicted RBP13.61□□□□□ -0.23
IFT88-202ENST00000351808 FIZ1Q96SL8 496 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 POLR1BQ9H9Y6 1135 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 AVENQ9NQS1 362 aaPredicted RBP13.61□□□□□ -0.23
IFT88-202ENST00000351808 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.61□□□□□ -0.23
IFT88-202ENST00000351808 PRPF19Q9UMS4 504 aaKnown RBP13.61□□□□□ -0.23
IFT88-202ENST00000351808 SLC27A5Q9Y2P5 690 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 PIK3R2O00459 728 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 HTRA2O43464 458 aaPredicted RBP13.61□□□□□ -0.23
IFT88-202ENST00000351808 KCNH1O95259 989 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 STARD3NLO95772 234 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 ITGAVP06756 1048 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 GNAO1P09471 354 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 UNGP13051 313 aaPredicted RBP13.61□□□□□ -0.23
IFT88-202ENST00000351808 IDUAP35475 653 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 ETFBP38117 255 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 NR4A2P43354 598 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 DYNLT1P63172 113 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 BASP1P80723 227 aaKnown RBP13.61□□□□□ -0.23
IFT88-202ENST00000351808 DNASE1L3Q13609 305 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 ANGEL2Q5VTE6 544 aaKnown RBP13.61□□□□□ -0.23
IFT88-202ENST00000351808 SLC9A4Q6AI14 798 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 DSG4Q86SJ6 1040 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 SLC4A5Q9BY07 1137 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 TRPV6Q9H1D0 765 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 TP63Q9H3D4 680 aaPredicted RBP13.61□□□□□ -0.23
IFT88-202ENST00000351808 SNX25Q9H3E2 840 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 SMARCAD1Q9H4L7 1026 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 STN1Q9H668 368 aaKnown RBP13.61□□□□□ -0.23
IFT88-202ENST00000351808 TRAF6Q9Y4K3 522 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 AVILO75366 819 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 SPAG6O75602 509 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 POLR2EP19388 210 aaKnown RBP13.61□□□□□ -0.23
IFT88-202ENST00000351808 KLRK1P26718 216 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 GNL1P36915 607 aaPredicted RBP13.61□□□□□ -0.23
IFT88-202ENST00000351808 NRLP54845 237 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 CARTPTQ16568 116 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 AGAP7PQ5VUJ5 663 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 FRA10AC1Q70Z53 315 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 ARCQ7LC44 396 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms