RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 TNFAIP2Q03169 654 aa18.67■□□□□ 0.58
PTP4A3-202ENST00000349124 ZNF618Q5T7W0 954 aa18.67■□□□□ 0.58
PTP4A3-202ENST00000349124 N4BP2L1Q5TBK1 243 aaPredicted RBP18.67■□□□□ 0.58
PTP4A3-202ENST00000349124 VWA5B1Q5TIE3 1220 aa18.67■□□□□ 0.58
PTP4A3-202ENST00000349124 FAM131BQ86XD5 332 aa18.67■□□□□ 0.58
PTP4A3-202ENST00000349124 EFCAB3Q8N7B9 438 aa18.67■□□□□ 0.58
PTP4A3-202ENST00000349124 CFAP61Q8NHU2 1237 aa18.67■□□□□ 0.58
PTP4A3-202ENST00000349124 WWP1Q9H0M0 922 aa18.67■□□□□ 0.58
PTP4A3-202ENST00000349124 SNTG2Q9NY99 539 aa18.67■□□□□ 0.58
PTP4A3-202ENST00000349124 COX16Q9P0S2 106 aa18.67■□□□□ 0.58
PTP4A3-202ENST00000349124 TAGLN3Q9UI15 199 aa18.67■□□□□ 0.58
PTP4A3-202ENST00000349124 CEP350Q5VT06 3117 aa18.67■□□□□ 0.58
PTP4A3-202ENST00000349124 TPP1O14773 563 aa18.66■□□□□ 0.58
PTP4A3-202ENST00000349124 ADCY6O43306 1168 aa18.66■□□□□ 0.58
PTP4A3-202ENST00000349124 LGALS2P05162 132 aa18.66■□□□□ 0.58
PTP4A3-202ENST00000349124 RAP1GDS1P52306 607 aa18.66■□□□□ 0.58
PTP4A3-202ENST00000349124 PEX6Q13608 980 aa18.66■□□□□ 0.58
PTP4A3-202ENST00000349124 PDE1CQ14123 709 aaPredicted RBP18.66■□□□□ 0.58
PTP4A3-202ENST00000349124 KCTD2Q14681 263 aa18.66■□□□□ 0.58
PTP4A3-202ENST00000349124 THEMIS2Q5TEJ8 643 aa18.66■□□□□ 0.58
PTP4A3-202ENST00000349124 MAF1Q9H063 256 aa18.66■□□□□ 0.58
PTP4A3-202ENST00000349124 MMADHCQ9H3L0 296 aaPredicted RBP18.66■□□□□ 0.58
PTP4A3-202ENST00000349124 XAB2Q9HCS7 855 aaKnown RBP18.66■□□□□ 0.58
PTP4A3-202ENST00000349124 PNPOQ9NVS9 261 aa18.66■□□□□ 0.58
PTP4A3-202ENST00000349124 ITGA11Q9UKX5 1188 aa18.66■□□□□ 0.58
PTP4A3-202ENST00000349124 MCM3APO60318 1980 aa18.66■□□□□ 0.58
PTP4A3-202ENST00000349124 A6NJR5 290 aa18.66■□□□□ 0.58
PTP4A3-202ENST00000349124 SPECC1L-ADORA2AF8WAN1 911 aa18.66■□□□□ 0.58
PTP4A3-202ENST00000349124 MDM4O15151 490 aa18.66■□□□□ 0.58
PTP4A3-202ENST00000349124 SP100P23497 879 aaPredicted RBP18.66■□□□□ 0.58
PTP4A3-202ENST00000349124 MGAT1P26572 445 aa18.66■□□□□ 0.58
PTP4A3-202ENST00000349124 RALGPS1Q5JS13 557 aa18.66■□□□□ 0.58
PTP4A3-202ENST00000349124 TEDDM1Q5T9Z0 273 aa18.66■□□□□ 0.58
PTP4A3-202ENST00000349124 NCBP2-AS2Q69YL0 99 aa18.66■□□□□ 0.58
PTP4A3-202ENST00000349124 PPM1HQ9ULR3 514 aa18.66■□□□□ 0.58
PTP4A3-202ENST00000349124 NPTXRO95502 500 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 MRPS35P82673 323 aaKnown RBP18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 AP1B1Q10567 949 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 FAM187BQ17R55 369 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 HEATR6Q6AI08 1181 aaKnown RBP18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 CDKL3Q8IVW4 592 aaPredicted RBP18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 GSTCDQ8NEC7 633 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 AFG1LQ8WV93 481 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 ATXN7L3BQ96GX2 97 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 TBCBQ99426 244 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 FRMD8Q9BZ67 464 aaPredicted RBP18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 MAGED2Q9UNF1 606 aaPredicted RBP18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 CSADQ9Y600 493 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 SCN1AP35498 2009 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 DNAJC25-GNG10A0A024R161 153 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 SDR42E2A6NKP2 422 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 MLH1P40692 756 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 DPYSL2Q16555 572 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 KIZQ2M2Z5 673 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 FAM91A1Q658Y4 838 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 POTEAQ6S8J7 498 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 MAVSQ7Z434 540 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 TRIM42Q8IWZ5 723 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 LRRC39Q96DD0 335 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 MOCOSQ96EN8 888 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 THAP1Q9NVV9 213 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 SEPT10Q9P0V9 454 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 POLR2AP24928 1970 aaKnown RBP18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 TRIP11Q15643 1979 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 MAGEC1O60732 1142 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 TM7SF2O76062 418 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 ERVK-10P10266 1014 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 FGF3P11487 239 aaPredicted RBP18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 ARHGAP1Q07960 439 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 TUBB3Q13509 450 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 CMPK2Q5EBM0 449 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 MBLAC2Q68D91 279 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 C10orf107Q8IVU9 208 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 COLGALT1Q8NBJ5 622 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 ARNTL2Q8WYA1 636 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 MTBPQ96DY7 904 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 NFKBIZQ9BYH8 718 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 XPNPEP3Q9NQH7 507 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 ACSS2Q9NR19 701 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 KIAA1257Q9ULG3 409 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 LRCH1Q9Y2L9 728 aa18.65■□□□□ 0.58
PTP4A3-202ENST00000349124 A8MXQ7 604 aa18.64■□□□□ 0.57
PTP4A3-202ENST00000349124 PRKCGP05129 697 aa18.64■□□□□ 0.57
PTP4A3-202ENST00000349124 ANPEPP15144 967 aa18.64■□□□□ 0.57
PTP4A3-202ENST00000349124 CD1EP15812 388 aa18.64■□□□□ 0.57
PTP4A3-202ENST00000349124 ABCG1P45844 678 aa18.64■□□□□ 0.57
PTP4A3-202ENST00000349124 SLC26A2P50443 739 aa18.64■□□□□ 0.57
PTP4A3-202ENST00000349124 CBLBQ13191 982 aa18.64■□□□□ 0.57
PTP4A3-202ENST00000349124 LRRC36Q1X8D7 754 aa18.64■□□□□ 0.57
PTP4A3-202ENST00000349124 C1orf146Q5VVC0 180 aa18.64■□□□□ 0.57
PTP4A3-202ENST00000349124 DPY19L2Q6NUT2 758 aa18.64■□□□□ 0.57
PTP4A3-202ENST00000349124 SESTD1Q86VW0 696 aa18.64■□□□□ 0.57
PTP4A3-202ENST00000349124 HTR3CQ8WXA8 447 aa18.64■□□□□ 0.57
PTP4A3-202ENST00000349124 EIF2AQ9BY44 585 aaKnown RBP18.64■□□□□ 0.57
PTP4A3-202ENST00000349124 C2CD2Q9Y426 696 aa18.64■□□□□ 0.57
PTP4A3-202ENST00000349124 UBTFL6P0CB48 400 aaPredicted RBP18.64■□□□□ 0.57
PTP4A3-202ENST00000349124 CPOXP36551 454 aa18.64■□□□□ 0.57
PTP4A3-202ENST00000349124 SLC1A6P48664 564 aa18.64■□□□□ 0.57
PTP4A3-202ENST00000349124 PDE1BQ01064 536 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms