RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 IL1RAPL1Q9NZN1 696 aa23.67■■□□□ 1.38
NPAS3-201ENST00000346562 A0A088AWK7 358 aa23.67■■□□□ 1.38
NPAS3-201ENST00000346562 AKR1A1P14550 325 aa23.67■■□□□ 1.38
NPAS3-201ENST00000346562 ZNF10P21506 573 aaPredicted RBP23.67■■□□□ 1.38
NPAS3-201ENST00000346562 TRAF2Q12933 501 aa23.67■■□□□ 1.38
NPAS3-201ENST00000346562 CCNG2Q16589 344 aa23.67■■□□□ 1.38
NPAS3-201ENST00000346562 SLC27A1Q6PCB7 646 aa23.67■■□□□ 1.38
NPAS3-201ENST00000346562 ZNF557Q8N988 423 aaPredicted RBP23.67■■□□□ 1.38
NPAS3-201ENST00000346562 NDOR1Q9UHB4 597 aa23.67■■□□□ 1.38
NPAS3-201ENST00000346562 UBDO15205 165 aa23.67■■□□□ 1.38
NPAS3-201ENST00000346562 TSPAN3O60637 253 aa23.67■■□□□ 1.38
NPAS3-201ENST00000346562 OR1E1P30953 314 aa23.67■■□□□ 1.38
NPAS3-201ENST00000346562 MAGEA10P43363 369 aaPredicted RBP23.67■■□□□ 1.38
NPAS3-201ENST00000346562 VAC14Q08AM6 782 aa23.67■■□□□ 1.38
NPAS3-201ENST00000346562 ZNF720Q7Z2F6 126 aa23.67■■□□□ 1.38
NPAS3-201ENST00000346562 POP1Q99575 1024 aaKnown RBP23.67■■□□□ 1.38
NPAS3-201ENST00000346562 SMIM22K7EJ46 135 aa23.66■■□□□ 1.38
NPAS3-201ENST00000346562 DSG3P32926 999 aa23.66■■□□□ 1.38
NPAS3-201ENST00000346562 SKIV2L2P42285 1042 aaKnown RBP23.66■■□□□ 1.38
NPAS3-201ENST00000346562 ATG16L2Q8NAA4 619 aa23.66■■□□□ 1.38
NPAS3-201ENST00000346562 MDM1Q8TC05 714 aa23.66■■□□□ 1.38
NPAS3-201ENST00000346562 TMEM121Q9BTD3 319 aa23.66■■□□□ 1.38
NPAS3-201ENST00000346562 ANKRD6Q9Y2G4 727 aa23.66■■□□□ 1.38
NPAS3-201ENST00000346562 AQP5P55064 265 aa23.66■■□□□ 1.38
NPAS3-201ENST00000346562 MAP10Q9P2G4 905 aa23.66■■□□□ 1.38
NPAS3-201ENST00000346562 PLAGL2Q9UPG8 496 aa23.66■■□□□ 1.38
NPAS3-201ENST00000346562 CCDC153Q494R4 210 aa23.66■■□□□ 1.38
NPAS3-201ENST00000346562 FAM171A1Q5VUB5 890 aa23.66■■□□□ 1.38
NPAS3-201ENST00000346562 DNAJB3Q8WWF6 145 aa23.66■■□□□ 1.38
NPAS3-201ENST00000346562 MTFR1LQ9H019 292 aa23.66■■□□□ 1.38
NPAS3-201ENST00000346562 ERI2A8K979 691 aaKnown RBP23.66■■□□□ 1.38
NPAS3-201ENST00000346562 KLRK1P26718 216 aa23.66■■□□□ 1.38
NPAS3-201ENST00000346562 NOS3P29474 1203 aa23.66■■□□□ 1.38
NPAS3-201ENST00000346562 C1QBPQ07021 282 aaKnown RBP23.66■■□□□ 1.38
NPAS3-201ENST00000346562 TMEM26Q6ZUK4 368 aa23.66■■□□□ 1.38
NPAS3-201ENST00000346562 ZNF410Q86VK4 478 aa23.66■■□□□ 1.38
NPAS3-201ENST00000346562 LZTR1Q8N653 840 aa23.66■■□□□ 1.38
NPAS3-201ENST00000346562 ACTRT1Q8TDG2 376 aa23.66■■□□□ 1.38
NPAS3-201ENST00000346562 DCLK3Q9C098 648 aa23.66■■□□□ 1.38
NPAS3-201ENST00000346562 CTDNEP1O95476 244 aa23.65■■□□□ 1.38
NPAS3-201ENST00000346562 TBCBQ99426 244 aa23.65■■□□□ 1.38
NPAS3-201ENST00000346562 NMRAL1Q9HBL8 299 aa23.65■■□□□ 1.38
NPAS3-201ENST00000346562 AVENQ9NQS1 362 aaPredicted RBP23.65■■□□□ 1.38
NPAS3-201ENST00000346562 RARGP13631 454 aa23.65■■□□□ 1.38
NPAS3-201ENST00000346562 PGAM1P18669 254 aa23.65■■□□□ 1.38
NPAS3-201ENST00000346562 CALB2P22676 271 aa23.65■■□□□ 1.38
NPAS3-201ENST00000346562 TROAPQ12815 778 aa23.65■■□□□ 1.38
NPAS3-201ENST00000346562 SPANXN3Q5MJ09 141 aa23.65■■□□□ 1.38
NPAS3-201ENST00000346562 KRT77Q7Z794 578 aa23.65■■□□□ 1.38
NPAS3-201ENST00000346562 SETBP1Q9Y6X0 1596 aa23.65■■□□□ 1.38
NPAS3-201ENST00000346562 F8VZ95 297 aa23.65■■□□□ 1.38
NPAS3-201ENST00000346562 BAIAP3O94812 1187 aa23.65■■□□□ 1.38
NPAS3-201ENST00000346562 CRABP2P29373 138 aa23.65■■□□□ 1.38
NPAS3-201ENST00000346562 PRKAA2P54646 552 aa23.65■■□□□ 1.38
NPAS3-201ENST00000346562 C2CD6Q53TS8 623 aa23.65■■□□□ 1.38
NPAS3-201ENST00000346562 ELOVL4Q9GZR5 314 aa23.65■■□□□ 1.38
NPAS3-201ENST00000346562 ENOPH1Q9UHY7 261 aa23.65■■□□□ 1.38
NPAS3-201ENST00000346562 TRHDEQ9UKU6 1024 aa23.65■■□□□ 1.38
NPAS3-201ENST00000346562 PLEKP08567 350 aaPredicted RBP23.65■■□□□ 1.38
NPAS3-201ENST00000346562 NPY2RP49146 381 aa23.65■■□□□ 1.38
NPAS3-201ENST00000346562 TAF2Q6P1X5 1199 aa23.65■■□□□ 1.38
NPAS3-201ENST00000346562 NEK10Q6ZWH5 1172 aa23.65■■□□□ 1.38
NPAS3-201ENST00000346562 SLC47A2Q86VL8 602 aa23.65■■□□□ 1.38
NPAS3-201ENST00000346562 SYTL5Q8TDW5 730 aaPredicted RBP23.65■■□□□ 1.38
NPAS3-201ENST00000346562 TMEM120AQ9BXJ8 343 aa23.65■■□□□ 1.38
NPAS3-201ENST00000346562 RAD21L1Q9H4I0 556 aa23.65■■□□□ 1.38
NPAS3-201ENST00000346562 SAC3D1A6NKF1 404 aa23.65■■□□□ 1.38
NPAS3-201ENST00000346562 ATP6V1B1P15313 513 aa23.65■■□□□ 1.38
NPAS3-201ENST00000346562 RCN1Q15293 331 aa23.65■■□□□ 1.38
NPAS3-201ENST00000346562 NECAB2Q7Z6G3 386 aa23.65■■□□□ 1.38
NPAS3-201ENST00000346562 STARD8Q92502 1023 aa23.65■■□□□ 1.38
NPAS3-201ENST00000346562 PPP1R16AQ96I34 528 aa23.65■■□□□ 1.38
NPAS3-201ENST00000346562 VPS4BO75351 444 aa23.64■■□□□ 1.38
NPAS3-201ENST00000346562 RRM1P23921 792 aa23.64■■□□□ 1.38
NPAS3-201ENST00000346562 RFX5P48382 616 aaPredicted RBP23.64■■□□□ 1.38
NPAS3-201ENST00000346562 RAD23AP54725 363 aa23.64■■□□□ 1.38
NPAS3-201ENST00000346562 KPNB1Q14974 876 aaKnown RBP23.64■■□□□ 1.38
NPAS3-201ENST00000346562 ZNF655Q8N720 491 aaPredicted RBP23.64■■□□□ 1.38
NPAS3-201ENST00000346562 MOSPD2Q8NHP6 518 aa23.64■■□□□ 1.38
NPAS3-201ENST00000346562 TBL1YQ9BQ87 522 aa23.64■■□□□ 1.38
NPAS3-201ENST00000346562 SH3BP4Q9P0V3 963 aa23.64■■□□□ 1.38
NPAS3-201ENST00000346562 DLC1Q96QB1 1528 aa23.64■■□□□ 1.38
NPAS3-201ENST00000346562 INSRRP14616 1297 aa23.64■■□□□ 1.38
NPAS3-201ENST00000346562 LY6KQ17RY6 165 aa23.64■■□□□ 1.38
NPAS3-201ENST00000346562 SLC30A9Q6PML9 568 aa23.64■■□□□ 1.38
NPAS3-201ENST00000346562 CYP20A1Q6UW02 462 aa23.64■■□□□ 1.38
NPAS3-201ENST00000346562 PANX3Q96QZ0 392 aa23.64■■□□□ 1.38
NPAS3-201ENST00000346562 SLC40A1Q9NP59 571 aa23.64■■□□□ 1.38
NPAS3-201ENST00000346562 TRPV2Q9Y5S1 764 aa23.64■■□□□ 1.38
NPAS3-201ENST00000346562 FAM25AB3EWG3 89 aa23.64■■□□□ 1.37
NPAS3-201ENST00000346562 FAM25CB3EWG5 89 aa23.64■■□□□ 1.37
NPAS3-201ENST00000346562 FAM25GB3EWG6 89 aa23.64■■□□□ 1.37
NPAS3-201ENST00000346562 H3BMM5 538 aa23.64■■□□□ 1.37
NPAS3-201ENST00000346562 GYS1P13807 737 aa23.64■■□□□ 1.37
NPAS3-201ENST00000346562 TRIM16LQ309B1 348 aa23.64■■□□□ 1.37
NPAS3-201ENST00000346562 GLT6D1Q7Z4J2 308 aa23.64■■□□□ 1.37
NPAS3-201ENST00000346562 COMMD2Q86X83 199 aa23.64■■□□□ 1.37
NPAS3-201ENST00000346562 ABRAQ8N0Z2 381 aa23.64■■□□□ 1.37
NPAS3-201ENST00000346562 TAS1R2Q8TE23 839 aa23.64■■□□□ 1.37
NPAS3-201ENST00000346562 XPNPEP3Q9NQH7 507 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms