RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 IGLV3-27P01718 113 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 RHOXF2BP0C7M4 288 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 GOT1P17174 413 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 HOXA9P31269 272 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 ARL4AP40617 200 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 KPNA1P52294 538 aaPredicted RBP16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 DYNLT1P63172 113 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 SMAD3P84022 425 aaKnown RBP16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 RING1Q06587 406 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 CCNG2Q16589 344 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 GLE1Q53GS7 698 aaKnown RBP16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 FAM72AQ5TYM5 149 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 SLC9A4Q6AI14 798 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 FAM72DQ6L9T8 149 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 C8orf74Q6P047 294 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 RBM23Q86U06 439 aaKnown RBP16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 FAM72BQ86X60 149 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 HS6ST3Q8IZP7 471 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 ATG4AQ8WYN0 398 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 TIFAQ96CG3 184 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 RHOXF2Q9BQY4 288 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 EPC1Q9H2F5 836 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 DPP7Q9UHL4 492 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 HBS1LQ9Y450 684 aaKnown RBP16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 HCFC2Q9Y5Z7 792 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 C2orf78A6NCI8 922 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 H3BRJ5 948 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 PAGE1O75459 146 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 HNRNPA1P09651 372 aaKnown RBP eCLIP16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 GABRR2P28476 465 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 COILP38432 576 aaPredicted RBP16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 HCAR3P49019 387 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 FNTAP49354 379 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 ZNF135P52742 658 aaPredicted RBP16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 ELF2Q15723 593 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 TTC27Q6P3X3 843 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 GAREM2Q75VX8 874 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 GPR161Q8N6U8 529 aaKnown RBP16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 TTC13Q8NBP0 860 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 TLE6Q9H808 572 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 ANKZF1Q9H8Y5 726 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 OR12D3Q9UGF7 316 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 AMACRQ9UHK6 382 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 CDH23Q9H251 3354 aa16.91■□□□□ 0.3
CEACAM1-202ENST00000344391 APOC4-APOC2K7ER74 178 aa16.91■□□□□ 0.3
CEACAM1-202ENST00000344391 EEF2KO00418 725 aaKnown RBP16.91■□□□□ 0.3
CEACAM1-202ENST00000344391 RAD51CO43502 376 aa16.91■□□□□ 0.3
CEACAM1-202ENST00000344391 CREB3O43889 395 aa16.91■□□□□ 0.3
CEACAM1-202ENST00000344391 APOC2P02655 101 aa16.91■□□□□ 0.3
CEACAM1-202ENST00000344391 MRPS25P82663 173 aaKnown RBP16.91■□□□□ 0.3
CEACAM1-202ENST00000344391 DUSP6Q16828 381 aa16.91■□□□□ 0.3
CEACAM1-202ENST00000344391 CCDC70Q6NSX1 233 aa16.91■□□□□ 0.3
CEACAM1-202ENST00000344391 CCDC137Q6PK04 289 aaKnown RBP16.91■□□□□ 0.3
CEACAM1-202ENST00000344391 CHRDL2Q6WN34 429 aa16.91■□□□□ 0.3
CEACAM1-202ENST00000344391 PLD5Q8N7P1 536 aa16.91■□□□□ 0.3
CEACAM1-202ENST00000344391 CCDC26Q8TAB7 109 aa16.91■□□□□ 0.3
CEACAM1-202ENST00000344391 CORO1BQ9BR76 489 aa16.91■□□□□ 0.3
CEACAM1-202ENST00000344391 NACA2Q9H009 215 aa16.91■□□□□ 0.3
CEACAM1-202ENST00000344391 RNF38Q9H0F5 515 aa16.91■□□□□ 0.3
CEACAM1-202ENST00000344391 PRDM16Q9HAZ2 1276 aa16.91■□□□□ 0.3
CEACAM1-202ENST00000344391 ASAH2Q9NR71 780 aa16.91■□□□□ 0.3
CEACAM1-202ENST00000344391 PCYOX1Q9UHG3 505 aa16.91■□□□□ 0.3
CEACAM1-202ENST00000344391 SNX10Q9Y5X0 201 aa16.91■□□□□ 0.3
CEACAM1-202ENST00000344391 RFXAPO00287 272 aa16.9■□□□□ 0.3
CEACAM1-202ENST00000344391 APOL1O14791 398 aa16.9■□□□□ 0.3
CEACAM1-202ENST00000344391 MOCS2O96007 188 aaPredicted RBP16.9■□□□□ 0.3
CEACAM1-202ENST00000344391 APOEP02649 317 aa16.9■□□□□ 0.3
CEACAM1-202ENST00000344391 AMPD1P23109 780 aa16.9■□□□□ 0.3
CEACAM1-202ENST00000344391 KCNJ1P48048 391 aa16.9■□□□□ 0.3
CEACAM1-202ENST00000344391 EPHA5P54756 1037 aa16.9■□□□□ 0.3
CEACAM1-202ENST00000344391 DRICH1Q6PGQ1 229 aaPredicted RBP16.9■□□□□ 0.3
CEACAM1-202ENST00000344391 RFX8Q6ZV50 586 aa16.9■□□□□ 0.3
CEACAM1-202ENST00000344391 MAATS1Q7Z4T9 603 aa16.9■□□□□ 0.3
CEACAM1-202ENST00000344391 ATP6V0D2Q8N8Y2 350 aa16.9■□□□□ 0.3
CEACAM1-202ENST00000344391 ACTL9Q8TC94 416 aa16.9■□□□□ 0.3
CEACAM1-202ENST00000344391 HAUS1Q96CS2 278 aa16.9■□□□□ 0.3
CEACAM1-202ENST00000344391 C1orf74Q96LT6 269 aa16.9■□□□□ 0.3
CEACAM1-202ENST00000344391 RUNDC3BQ96NL0 473 aa16.9■□□□□ 0.3
CEACAM1-202ENST00000344391 EPAS1Q99814 870 aa16.9■□□□□ 0.3
CEACAM1-202ENST00000344391 FAM118BQ9BPY3 351 aa16.9■□□□□ 0.3
CEACAM1-202ENST00000344391 FRMD8P1Q9BZ68 369 aaPredicted RBP16.9■□□□□ 0.3
CEACAM1-202ENST00000344391 SIK2Q9H0K1 926 aa16.9■□□□□ 0.3
CEACAM1-202ENST00000344391 ARHGEF4Q9NR80 690 aa16.9■□□□□ 0.3
CEACAM1-202ENST00000344391 ZDHHC7Q9NXF8 308 aa16.9■□□□□ 0.3
CEACAM1-202ENST00000344391 SAE1Q9UBE0 346 aaPredicted RBP16.9■□□□□ 0.3
CEACAM1-202ENST00000344391 DMGDHQ9UI17 866 aaKnown RBP16.9■□□□□ 0.3
CEACAM1-202ENST00000344391 XPO7Q9UIA9 1087 aaKnown RBP16.9■□□□□ 0.3
CEACAM1-202ENST00000344391 NOTCH4Q99466 2003 aa16.9■□□□□ 0.3
CEACAM1-202ENST00000344391 TARSL2A2RTX5 802 aaKnown RBP16.89■□□□□ 0.29
CEACAM1-202ENST00000344391 LIASO43766 372 aa16.89■□□□□ 0.29
CEACAM1-202ENST00000344391 LRIG2O94898 1065 aa16.89■□□□□ 0.29
CEACAM1-202ENST00000344391 OLFM2O95897 454 aa16.89■□□□□ 0.29
CEACAM1-202ENST00000344391 HMBSP08397 361 aa16.89■□□□□ 0.29
CEACAM1-202ENST00000344391 POU2F2P09086 479 aa16.89■□□□□ 0.29
CEACAM1-202ENST00000344391 PECAM1P16284 738 aaPredicted RBP16.89■□□□□ 0.29
CEACAM1-202ENST00000344391 ZFXP17010 805 aaPredicted RBP16.89■□□□□ 0.29
CEACAM1-202ENST00000344391 PTPN2P17706 415 aa16.89■□□□□ 0.29
CEACAM1-202ENST00000344391 TGM2P21980 687 aa16.89■□□□□ 0.29
CEACAM1-202ENST00000344391 CDC25CP30307 473 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms