RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 PROSER1Q86XN7 944 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 ARHGAP18Q8N392 663 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 IRGQQ8WZA9 623 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 HAPLN3Q96S86 360 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 SMC6Q96SB8 1091 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 GPR62Q9BZJ7 368 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 LMAN1LQ9HAT1 526 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 SLC12A6Q9UHW9 1150 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 CPSF3Q9UKF6 684 aaKnown RBP7.64□□□□□ -1.19
ZNF540-202ENST00000343599 SLC8A2Q9UPR5 921 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 PFDN1O60925 122 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 NDUFA8P51970 172 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 USP46P62068 366 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 GSTM4Q03013 218 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 MAP7Q14244 749 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 RTP2Q5QGT7 225 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 KCTD16Q68DU8 428 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 C4orf50Q6ZRC1 276 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 C1orf186Q6ZWK4 172 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 HTR3DQ70Z44 454 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 PLPP6Q8IY26 295 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 YAF2Q8IY57 180 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 FGF14Q92915 247 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 ACAP3Q96P50 834 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 TRIM62Q9BVG3 475 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 DNAJB4Q9UDY4 337 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 PIAS3Q9Y6X2 628 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 V9GY48 417 aaPredicted RBP7.64□□□□□ -1.19
ZNF540-202ENST00000343599 SMIM28A0A1B0GU29 152 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 OGTO15294 1046 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 MAP3K7O43318 606 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 ZC3H11AO75152 810 aaKnown RBP eCLIP7.63□□□□□ -1.19
ZNF540-202ENST00000343599 ZNF18P17022 549 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 FUT4P22083 530 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 GSTT1P30711 240 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 MPLP40238 635 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 GATMP50440 423 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 LSAMPQ13449 338 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 ITIH4Q14624 930 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 UBE2SQ16763 222 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 SMUG1Q53HV7 270 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 CCDC70Q6NSX1 233 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 IRGCQ6NXR0 463 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 NEK5Q6P3R8 708 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 LPCAT2Q7L5N7 544 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 ZNF554Q86TJ5 538 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 SLC9A9Q8IVB4 645 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 PDCD7Q8N8D1 485 aaKnown RBP7.63□□□□□ -1.19
ZNF540-202ENST00000343599 C12orf50Q8NA57 414 aaPredicted RBP7.63□□□□□ -1.19
ZNF540-202ENST00000343599 TPCN2Q8NHX9 752 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 FAM136AQ96C01 138 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 DPYSL5Q9BPU6 564 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 NUSAP1Q9BXS6 441 aaKnown RBP7.63□□□□□ -1.19
ZNF540-202ENST00000343599 INIPQ9NRY2 104 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 SAR1BQ9Y6B6 198 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 KRT14P02533 472 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 DRD4P21917 467 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 CDC27P30260 824 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 ERVPABLB-1P60509 514 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 NFX1Q12986 1120 aaKnown RBP7.63□□□□□ -1.19
ZNF540-202ENST00000343599 KRT72Q14CN4 511 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 LONRF1Q17RB8 773 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 EML3Q32P44 896 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 HOOK3Q86VS8 718 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 ETFBKMTQ8IXQ9 262 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 CMTM8Q8IZV2 173 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 STKLD1Q8NE28 680 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 ASAP3Q8TDY4 903 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 BRF1Q92994 677 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 POLR3FQ9H1D9 316 aaPredicted RBP7.63□□□□□ -1.19
ZNF540-202ENST00000343599 CSNK1G1Q9HCP0 422 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 PPANQ9NQ55 473 aaKnown RBP7.63□□□□□ -1.19
ZNF540-202ENST00000343599 ADAM22Q9P0K1 906 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 FZD4Q9ULV1 537 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 PCDHA7Q9UN72 937 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 EFR3BQ9Y2G0 817 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 PLXNB3Q9ULL4 1909 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 A0A0B4J269 797 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 KLF18A0A0U1RQI7 1052 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 HEPACAM2A8MVW5 462 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 P4HA2O15460 535 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 TPPPO94811 219 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 VNN2O95498 520 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 ITGB2P05107 769 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 NFICP08651 508 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 PCSK1P29120 753 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 FLT3P36888 993 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 MLH1P40692 756 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 CDKN1CP49918 316 aaPredicted RBP7.63□□□□□ -1.19
ZNF540-202ENST00000343599 KPNA1P52294 538 aaPredicted RBP7.63□□□□□ -1.19
ZNF540-202ENST00000343599 HAND2P61296 217 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 GPC5P78333 572 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 NR1I3Q14994 352 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 MAP7D1Q3KQU3 841 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 PRR16Q569H4 304 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 THOC7Q6I9Y2 204 aaKnown RBP7.63□□□□□ -1.19
ZNF540-202ENST00000343599 PACS1Q6VY07 963 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 CEP128Q6ZU80 1094 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 CHST3Q7LGC8 479 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 TBC1D1Q86TI0 1168 aaPredicted RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms