RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 SRRM1Q8IYB3 904 aaKnown RBP19.24■□□□□ 0.67
HOXA9-201ENST00000343483 FBXO36Q8NEA4 188 aa19.24■□□□□ 0.67
HOXA9-201ENST00000343483 QKIQ96PU8 341 aaKnown RBP eCLIP19.24■□□□□ 0.67
HOXA9-201ENST00000343483 TBC1D13Q9NVG8 400 aa19.24■□□□□ 0.67
HOXA9-201ENST00000343483 TSC2P49815 1807 aa19.24■□□□□ 0.67
HOXA9-201ENST00000343483 POC1B-GALNT4F8VUJ3 575 aa19.23■□□□□ 0.67
HOXA9-201ENST00000343483 CHADO15335 359 aa19.23■□□□□ 0.67
HOXA9-201ENST00000343483 ADRA1BP35368 520 aa19.23■□□□□ 0.67
HOXA9-201ENST00000343483 PIGWQ7Z7B1 504 aa19.23■□□□□ 0.67
HOXA9-201ENST00000343483 SPATA2LQ8IUW3 424 aaPredicted RBP19.23■□□□□ 0.67
HOXA9-201ENST00000343483 ANKS4BQ8N8V4 417 aa19.23■□□□□ 0.67
HOXA9-201ENST00000343483 ATP11CQ8NB49 1132 aa19.23■□□□□ 0.67
HOXA9-201ENST00000343483 FAM193BQ96PV7 902 aaPredicted RBP19.23■□□□□ 0.67
HOXA9-201ENST00000343483 WDR83Q9BRX9 315 aaKnown RBP19.23■□□□□ 0.67
HOXA9-201ENST00000343483 FTHL17Q9BXU8 183 aa19.23■□□□□ 0.67
HOXA9-201ENST00000343483 KLC2Q9H0B6 622 aa19.23■□□□□ 0.67
HOXA9-201ENST00000343483 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.23■□□□□ 0.67
HOXA9-201ENST00000343483 WDR6Q9NNW5 1121 aaKnown RBP19.23■□□□□ 0.67
HOXA9-201ENST00000343483 MLXIPLQ9NP71 852 aa19.23■□□□□ 0.67
HOXA9-201ENST00000343483 EURLQ9NYK6 297 aa19.23■□□□□ 0.67
HOXA9-201ENST00000343483 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.23■□□□□ 0.67
HOXA9-201ENST00000343483 DNAJB4Q9UDY4 337 aa19.23■□□□□ 0.67
HOXA9-201ENST00000343483 CLUHO75153 1309 aa19.23■□□□□ 0.67
HOXA9-201ENST00000343483 E7ESA3 106 aa19.23■□□□□ 0.67
HOXA9-201ENST00000343483 EEF2KO00418 725 aaKnown RBP19.23■□□□□ 0.67
HOXA9-201ENST00000343483 MFSD11O43934 449 aa19.23■□□□□ 0.67
HOXA9-201ENST00000343483 OR4Q2P0C623 313 aa19.23■□□□□ 0.67
HOXA9-201ENST00000343483 GPX6P59796 221 aa19.23■□□□□ 0.67
HOXA9-201ENST00000343483 IFRD2Q12894 506 aaPredicted RBP19.23■□□□□ 0.67
HOXA9-201ENST00000343483 HEATR6Q6AI08 1181 aaKnown RBP19.23■□□□□ 0.67
HOXA9-201ENST00000343483 COLGALT2Q8IYK4 626 aa19.23■□□□□ 0.67
HOXA9-201ENST00000343483 NETO2Q8NC67 525 aa19.23■□□□□ 0.67
HOXA9-201ENST00000343483 SLC9A7Q96T83 725 aa19.23■□□□□ 0.67
HOXA9-201ENST00000343483 ELAC2Q9BQ52 826 aaKnown RBP19.23■□□□□ 0.67
HOXA9-201ENST00000343483 TNRC18O15417 2968 aaPredicted RBP19.22■□□□□ 0.67
HOXA9-201ENST00000343483 H0YHG0 523 aa19.22■□□□□ 0.67
HOXA9-201ENST00000343483 APRTP07741 180 aa19.22■□□□□ 0.67
HOXA9-201ENST00000343483 EN2P19622 333 aaPredicted RBP19.22■□□□□ 0.67
HOXA9-201ENST00000343483 SSTR1P30872 391 aa19.22■□□□□ 0.67
HOXA9-201ENST00000343483 ACTN3Q08043 901 aaPredicted RBP19.22■□□□□ 0.67
HOXA9-201ENST00000343483 SF3A3Q12874 501 aaKnown RBP eCLIP19.22■□□□□ 0.67
HOXA9-201ENST00000343483 MPP2Q14168 576 aa19.22■□□□□ 0.67
HOXA9-201ENST00000343483 BSPRYQ5W0U4 402 aa19.22■□□□□ 0.67
HOXA9-201ENST00000343483 RFX8Q6ZV50 586 aa19.22■□□□□ 0.67
HOXA9-201ENST00000343483 PALM2Q8IXS6 379 aa19.22■□□□□ 0.67
HOXA9-201ENST00000343483 SCAMP5Q8TAC9 235 aa19.22■□□□□ 0.67
HOXA9-201ENST00000343483 TFB1MQ8WVM0 346 aaKnown RBP19.22■□□□□ 0.67
HOXA9-201ENST00000343483 MRRFQ96E11 262 aaKnown RBP19.22■□□□□ 0.67
HOXA9-201ENST00000343483 ANLNQ9NQW6 1124 aa19.22■□□□□ 0.67
HOXA9-201ENST00000343483 KANSL3Q9P2N6 904 aa19.22■□□□□ 0.67
HOXA9-201ENST00000343483 ACTL7BQ9Y614 415 aa19.22■□□□□ 0.67
HOXA9-201ENST00000343483 RASA4BC9J798 803 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 RASA4O43374 803 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 NBNO60934 754 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 PHBP35232 272 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 GRIK1P39086 918 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 SLC20A2Q08357 652 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 ITIH4Q14624 930 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 SLC39A12Q504Y0 691 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 PM20D1Q6GTS8 502 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 PPP1R21Q6ZMI0 780 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 C4orf50Q6ZRC1 276 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 C3orf62Q6ZUJ4 267 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 ABI1Q8IZP0 508 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 GDAP1Q8TB36 358 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 IRGQQ8WZA9 623 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 MAML1Q92585 1016 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 OLFM3Q96PB7 478 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 DEFB118Q96PH6 123 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 LGMNQ99538 433 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 COLEC11Q9BWP8 271 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 ACTR5Q9H9F9 607 aaPredicted RBP19.21■□□□□ 0.67
HOXA9-201ENST00000343483 ETNK1Q9HBU6 452 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 NKIRAS1Q9NYS0 192 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 RRN3Q9NYV6 651 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 FBXW11Q9UKB1 542 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 CHMP2BQ9UQN3 213 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 NR2E3Q9Y5X4 410 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 TCP11X1B4DZS4 312 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 FAM72CH0Y354 149 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 AVILO75366 819 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 AMHP03971 560 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 GCAP28676 217 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 AIF1P55008 147 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 ARL13BQ3SXY8 428 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 FAM72AQ5TYM5 149 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 FAM72DQ6L9T8 149 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 BZW1Q7L1Q6 419 aaKnown RBP19.21■□□□□ 0.67
HOXA9-201ENST00000343483 FAM72BQ86X60 149 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 VPS52Q8N1B4 723 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 NTAN1Q96AB6 310 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 PGAP3Q96FM1 320 aaPredicted RBP19.21■□□□□ 0.67
HOXA9-201ENST00000343483 TMEM161AQ9NX61 479 aa19.21■□□□□ 0.67
HOXA9-201ENST00000343483 ZMYND8Q9ULU4 1186 aaPredicted RBP19.21■□□□□ 0.67
HOXA9-201ENST00000343483 I6L893 689 aaPredicted RBP19.2■□□□□ 0.66
HOXA9-201ENST00000343483 GCATO75600 419 aa19.2■□□□□ 0.66
HOXA9-201ENST00000343483 DGKIO75912 1065 aa19.2■□□□□ 0.66
HOXA9-201ENST00000343483 F9P00740 461 aa19.2■□□□□ 0.66
HOXA9-201ENST00000343483 ELK3P41970 407 aa19.2■□□□□ 0.66
HOXA9-201ENST00000343483 NR1H3Q13133 447 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms