RNA–Protein interactions for RNA: ENST00000343253.11

CCDC18-201, Transcript of coiled-coil domain containing 18, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC18, Length 4,867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-201ENST00000343253 CCDC36Q8IYA8 594 aa11.12□□□□□ -0.63
CCDC18-201ENST00000343253 TSEN2Q8NCE0 465 aaKnown RBP11.12□□□□□ -0.63
CCDC18-201ENST00000343253 PSMA8Q8TAA3 256 aa11.12□□□□□ -0.63
CCDC18-201ENST00000343253 MYLPFQ96A32 169 aa11.12□□□□□ -0.63
CCDC18-201ENST00000343253 PTCD3Q96EY7 689 aaKnown RBP11.12□□□□□ -0.63
CCDC18-201ENST00000343253 KIAA1683Q9H0B3 1180 aa11.12□□□□□ -0.63
CCDC18-201ENST00000343253 SLITRK2Q9H156 845 aa11.12□□□□□ -0.63
CCDC18-201ENST00000343253 RIBC2Q9H4K1 309 aa11.12□□□□□ -0.63
CCDC18-201ENST00000343253 WDR41Q9HAD4 459 aa11.12□□□□□ -0.63
CCDC18-201ENST00000343253 ANKEF1Q9NU02 776 aa11.12□□□□□ -0.63
CCDC18-201ENST00000343253 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.12□□□□□ -0.63
CCDC18-201ENST00000343253 LSM7Q9UK45 103 aaKnown RBP11.12□□□□□ -0.63
CCDC18-201ENST00000343253 MINPP1Q9UNW1 487 aa11.12□□□□□ -0.63
CCDC18-201ENST00000343253 PARNO95453 639 aaKnown RBP11.11□□□□□ -0.63
CCDC18-201ENST00000343253 RCVRNP35243 200 aa11.11□□□□□ -0.63
CCDC18-201ENST00000343253 IREB2P48200 963 aaKnown RBP11.11□□□□□ -0.63
CCDC18-201ENST00000343253 NAB1Q13506 487 aa11.11□□□□□ -0.63
CCDC18-201ENST00000343253 C5orf22Q49AR2 442 aa11.11□□□□□ -0.63
CCDC18-201ENST00000343253 DENND5BQ6ZUT9 1274 aa11.11□□□□□ -0.63
CCDC18-201ENST00000343253 ZNF571Q7Z3V5 609 aaPredicted RBP11.11□□□□□ -0.63
CCDC18-201ENST00000343253 C11orf74Q86VG3 221 aa11.11□□□□□ -0.63
CCDC18-201ENST00000343253 CREG2Q8IUH2 290 aa11.11□□□□□ -0.63
CCDC18-201ENST00000343253 SLC44A2Q8IWA5 706 aaPredicted RBP11.11□□□□□ -0.63
CCDC18-201ENST00000343253 CDK20Q8IZL9 346 aa11.11□□□□□ -0.63
CCDC18-201ENST00000343253 MIER2Q8N344 545 aa11.11□□□□□ -0.63
CCDC18-201ENST00000343253 MLPHQ9BV36 600 aaPredicted RBP11.11□□□□□ -0.63
CCDC18-201ENST00000343253 CLK4Q9HAZ1 481 aaKnown RBP11.11□□□□□ -0.63
CCDC18-201ENST00000343253 OSGEPQ9NPF4 335 aa11.11□□□□□ -0.63
CCDC18-201ENST00000343253 ADPRHL2Q9NX46 363 aa11.11□□□□□ -0.63
CCDC18-201ENST00000343253 LOC100506127A0A0U1RQW1 187 aa11.11□□□□□ -0.63
CCDC18-201ENST00000343253 GUCY1B2O75343 617 aa11.11□□□□□ -0.63
CCDC18-201ENST00000343253 ADRA1DP25100 572 aa11.11□□□□□ -0.63
CCDC18-201ENST00000343253 MAPKAPK2P49137 400 aa11.11□□□□□ -0.63
CCDC18-201ENST00000343253 BCAP31P51572 246 aa11.11□□□□□ -0.63
CCDC18-201ENST00000343253 GRTP1Q5TC63 336 aa11.11□□□□□ -0.63
CCDC18-201ENST00000343253 MYO1HQ8N1T3 1032 aa11.11□□□□□ -0.63
CCDC18-201ENST00000343253 MOSPD2Q8NHP6 518 aa11.11□□□□□ -0.63
CCDC18-201ENST00000343253 SUN5Q8TC36 379 aa11.11□□□□□ -0.63
CCDC18-201ENST00000343253 MAP3K20Q9NYL2 800 aaKnown RBP11.11□□□□□ -0.63
CCDC18-201ENST00000343253 SLC2A3P11169 496 aa11.11□□□□□ -0.63
CCDC18-201ENST00000343253 AVPR1AP37288 418 aa11.11□□□□□ -0.63
CCDC18-201ENST00000343253 ELK3P41970 407 aa11.11□□□□□ -0.63
CCDC18-201ENST00000343253 CSHL1Q14406 222 aa11.11□□□□□ -0.63
CCDC18-201ENST00000343253 NUDT18Q6ZVK8 323 aa11.11□□□□□ -0.63
CCDC18-201ENST00000343253 TTC7BQ86TV6 843 aa11.11□□□□□ -0.63
CCDC18-201ENST00000343253 ANKRD49Q8WVL7 239 aa11.11□□□□□ -0.63
CCDC18-201ENST00000343253 C17orf50Q8WW18 174 aa11.11□□□□□ -0.63
CCDC18-201ENST00000343253 ELOVL6Q9H5J4 265 aa11.11□□□□□ -0.63
CCDC18-201ENST00000343253 CCNB1IP1Q9NPC3 277 aa11.11□□□□□ -0.63
CCDC18-201ENST00000343253 FAM49BQ9NUQ9 324 aa11.11□□□□□ -0.63
CCDC18-201ENST00000343253 CMTM6Q9NX76 183 aa11.11□□□□□ -0.63
CCDC18-201ENST00000343253 ZNF609O15014 1411 aa11.11□□□□□ -0.63
CCDC18-201ENST00000343253 TRDMT1O14717 391 aaKnown RBP11.1□□□□□ -0.63
CCDC18-201ENST00000343253 NCAM2O15394 837 aa11.1□□□□□ -0.63
CCDC18-201ENST00000343253 KRT36O76013 467 aa11.1□□□□□ -0.63
CCDC18-201ENST00000343253 SEMA3DO95025 777 aa11.1□□□□□ -0.63
CCDC18-201ENST00000343253 LSM8O95777 96 aaKnown RBP11.1□□□□□ -0.63
CCDC18-201ENST00000343253 RRM1P23921 792 aa11.1□□□□□ -0.63
CCDC18-201ENST00000343253 TGFBR2P37173 567 aa11.1□□□□□ -0.63
CCDC18-201ENST00000343253 ZNF284Q2VY69 593 aa11.1□□□□□ -0.63
CCDC18-201ENST00000343253 TTMPQ5BVD1 217 aa11.1□□□□□ -0.63
CCDC18-201ENST00000343253 TIGD7Q6NT04 549 aaPredicted RBP11.1□□□□□ -0.63
CCDC18-201ENST00000343253 IZUMO1Q8IYV9 350 aa11.1□□□□□ -0.63
CCDC18-201ENST00000343253 LRRC71Q8N4P6 559 aa11.1□□□□□ -0.63
CCDC18-201ENST00000343253 AADATQ8N5Z0 425 aa11.1□□□□□ -0.63
CCDC18-201ENST00000343253 BHLHE22Q8NFJ8 381 aaPredicted RBP11.1□□□□□ -0.63
CCDC18-201ENST00000343253 MTG1Q9BT17 334 aaPredicted RBP11.1□□□□□ -0.63
CCDC18-201ENST00000343253 TMEM165Q9HC07 324 aa11.1□□□□□ -0.63
CCDC18-201ENST00000343253 MTMR4Q9NYA4 1195 aa11.1□□□□□ -0.63
CCDC18-201ENST00000343253 MED14O60244 1454 aa11.1□□□□□ -0.63
CCDC18-201ENST00000343253 POLRMTO00411 1230 aaKnown RBP11.1□□□□□ -0.63
CCDC18-201ENST00000343253 AP5Z1O43299 807 aa11.1□□□□□ -0.63
CCDC18-201ENST00000343253 TMCC2O75069 709 aa11.1□□□□□ -0.63
CCDC18-201ENST00000343253 SGPL1O95470 568 aa11.1□□□□□ -0.63
CCDC18-201ENST00000343253 HOXB8P17481 243 aaPredicted RBP11.1□□□□□ -0.63
CCDC18-201ENST00000343253 CACNB2Q08289 660 aaPredicted RBP11.1□□□□□ -0.63
CCDC18-201ENST00000343253 SLC15A2Q16348 729 aa11.1□□□□□ -0.63
CCDC18-201ENST00000343253 EMC1Q8N766 993 aa11.1□□□□□ -0.63
CCDC18-201ENST00000343253 RBM46Q8TBY0 533 aaKnown RBP11.1□□□□□ -0.63
CCDC18-201ENST00000343253 SLC5A5Q92911 643 aa11.1□□□□□ -0.63
CCDC18-201ENST00000343253 SMAD5Q99717 465 aaKnown RBP11.1□□□□□ -0.63
CCDC18-201ENST00000343253 WBP11Q9Y2W2 641 aaKnown RBP11.1□□□□□ -0.63
CCDC18-201ENST00000343253 SERPINA1P01009 418 aa11.1□□□□□ -0.63
CCDC18-201ENST00000343253 DNAJB2P25686 324 aa11.1□□□□□ -0.63
CCDC18-201ENST00000343253 CRABP2P29373 138 aa11.1□□□□□ -0.63
CCDC18-201ENST00000343253 ANTXR2P58335 489 aa11.1□□□□□ -0.63
CCDC18-201ENST00000343253 TRIM28Q13263 835 aaKnown RBP11.1□□□□□ -0.63
CCDC18-201ENST00000343253 RABL6Q3YEC7 729 aaPredicted RBP11.1□□□□□ -0.63
CCDC18-201ENST00000343253 BICRALQ6AI39 1079 aa11.1□□□□□ -0.63
CCDC18-201ENST00000343253 CIAPIN1Q6FI81 312 aa11.1□□□□□ -0.63
CCDC18-201ENST00000343253 LRRN4CLQ8ND94 238 aa11.1□□□□□ -0.63
CCDC18-201ENST00000343253 SPATA33Q96N06 139 aa11.1□□□□□ -0.63
CCDC18-201ENST00000343253 EPB41L1Q9H4G0 881 aa11.1□□□□□ -0.63
CCDC18-201ENST00000343253 REEP1Q9H902 201 aa11.1□□□□□ -0.63
CCDC18-201ENST00000343253 ANKRD6Q9Y2G4 727 aa11.1□□□□□ -0.63
CCDC18-201ENST00000343253 IQGAP3Q86VI3 1631 aa11.1□□□□□ -0.63
CCDC18-201ENST00000343253 USP6P35125 1406 aa11.1□□□□□ -0.63
CCDC18-201ENST00000343253 CCDC154A6NI56 674 aa11.1□□□□□ -0.63
CCDC18-201ENST00000343253 CPSF4O95639 269 aaKnown RBP11.1□□□□□ -0.63
CCDC18-201ENST00000343253 ECDO95905 644 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms