RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 RNF219Q5W0B1 726 aaPredicted RBP10.8□□□□□ -0.68
TPM3-207ENST00000341372 GBP6Q6ZN66 633 aa10.8□□□□□ -0.68
TPM3-207ENST00000341372 MFSD6LQ8IWD5 586 aa10.8□□□□□ -0.68
TPM3-207ENST00000341372 CMTM8Q8IZV2 173 aa10.8□□□□□ -0.68
TPM3-207ENST00000341372 PPM1KQ8N3J5 372 aa10.8□□□□□ -0.68
TPM3-207ENST00000341372 PJA1Q8NG27 643 aa10.8□□□□□ -0.68
TPM3-207ENST00000341372 KREMEN1Q96MU8 473 aa10.8□□□□□ -0.68
TPM3-207ENST00000341372 TUBGCP2Q9BSJ2 902 aa10.8□□□□□ -0.68
TPM3-207ENST00000341372 KIF9Q9HAQ2 790 aa10.8□□□□□ -0.68
TPM3-207ENST00000341372 LUZP4Q9P127 313 aa10.8□□□□□ -0.68
TPM3-207ENST00000341372 POLR3KQ9Y2Y1 108 aaPredicted RBP10.8□□□□□ -0.68
TPM3-207ENST00000341372 METTL12A8MUP2 240 aa10.8□□□□□ -0.68
TPM3-207ENST00000341372 HEPACAM2A8MVW5 462 aa10.8□□□□□ -0.68
TPM3-207ENST00000341372 KHNYNO15037 678 aaKnown RBP10.8□□□□□ -0.68
TPM3-207ENST00000341372 OLFM2O95897 454 aa10.8□□□□□ -0.68
TPM3-207ENST00000341372 PSMC3P17980 439 aa10.8□□□□□ -0.68
TPM3-207ENST00000341372 ADORA2BP29275 332 aa10.8□□□□□ -0.68
TPM3-207ENST00000341372 GPC5P78333 572 aa10.8□□□□□ -0.68
TPM3-207ENST00000341372 MYL5Q02045 173 aa10.8□□□□□ -0.68
TPM3-207ENST00000341372 VWA3BQ502W6 1294 aa10.8□□□□□ -0.68
TPM3-207ENST00000341372 C4orf17Q53FE4 359 aa10.8□□□□□ -0.68
TPM3-207ENST00000341372 TCP11X2Q5H9J9 407 aa10.8□□□□□ -0.68
TPM3-207ENST00000341372 SNX30Q5VWJ9 437 aa10.8□□□□□ -0.68
TPM3-207ENST00000341372 TXNDC8Q6A555 127 aa10.8□□□□□ -0.68
TPM3-207ENST00000341372 HFE2Q6ZVN8 426 aa10.8□□□□□ -0.68
TPM3-207ENST00000341372 ENOSF1Q7L5Y1 443 aa10.8□□□□□ -0.68
TPM3-207ENST00000341372 PDZD8Q8NEN9 1154 aa10.8□□□□□ -0.68
TPM3-207ENST00000341372 DDX1Q92499 740 aaKnown RBP10.8□□□□□ -0.68
TPM3-207ENST00000341372 DNASE1L2Q92874 299 aa10.8□□□□□ -0.68
TPM3-207ENST00000341372 FAM81BQ96LP2 452 aa10.8□□□□□ -0.68
TPM3-207ENST00000341372 DUSP16Q9BY84 665 aa10.8□□□□□ -0.68
TPM3-207ENST00000341372 NDST4Q9H3R1 872 aa10.8□□□□□ -0.68
TPM3-207ENST00000341372 TRPV5Q9NQA5 729 aa10.8□□□□□ -0.68
TPM3-207ENST00000341372 KIAA1257Q9ULG3 409 aa10.8□□□□□ -0.68
TPM3-207ENST00000341372 TICRRQ7Z2Z1 1910 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 ZNF840PA6NDX5 716 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 ARNTLO00327 626 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 SUSD5O60279 629 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 ZDHHC11BP0C7U3 371 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 YWHAQP27348 245 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 VIPR2P41587 438 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 HTR3AP46098 478 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 MAP3K7CLP57077 242 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 PFKPQ01813 784 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 TAF10Q12962 218 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 NCAPHQ15003 741 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 EXOC3L4Q17RC7 722 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 DPY19L2P1Q6NXN4 242 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 PKN3Q6P5Z2 889 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 USP33Q8TEY7 942 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 HEXIM2Q96MH2 286 aaKnown RBP10.79□□□□□ -0.68
TPM3-207ENST00000341372 LRRC3BQ96PB8 259 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 SLITRK1Q96PX8 696 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 BPIFA3Q9BQP9 254 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 UBXN6Q9BZV1 441 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 TSPY26PQ9H489 355 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 SIX2Q9NPC8 291 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 PGPEP1Q9NXJ5 209 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 TRPM5Q9NZQ8 1165 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 APEX2Q9UBZ4 518 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 PCDHB10Q9UN67 800 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 F5P12259 2224 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 KRBA1A5PL33 1030 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 O00370 1275 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 LETM1O95202 739 aaPredicted RBP10.79□□□□□ -0.68
TPM3-207ENST00000341372 OAS1P00973 400 aaKnown RBP10.79□□□□□ -0.68
TPM3-207ENST00000341372 VDRP11473 427 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 ZNF18P17022 549 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 SLC9A1P19634 815 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 PON1P27169 355 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 AVPR1AP37288 418 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 TUBP50607 506 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 PDE6CP51160 858 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 SPRED3Q2MJR0 410 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 PKDCCQ504Y2 493 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 SGO2Q562F6 1265 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 VHLLQ6RSH7 139 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 TMEM270Q6UE05 265 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 RRAGAQ7L523 313 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 GPRIN1Q7Z2K8 1008 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 TTC30AQ86WT1 665 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 CELF5Q8N6W0 485 aaKnown RBP10.79□□□□□ -0.68
TPM3-207ENST00000341372 CNTD1Q8N815 330 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 MAB21L3Q8N8X9 362 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 ANKRD52Q8NB46 1076 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 VPS37AQ8NEZ2 397 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 SCAMP5Q8TAC9 235 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 USP13Q92995 863 aaPredicted RBP10.79□□□□□ -0.68
TPM3-207ENST00000341372 CRACR2AQ9BSW2 395 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 TRMT61BQ9BVS5 477 aaKnown RBP10.79□□□□□ -0.68
TPM3-207ENST00000341372 HSD3B7Q9H2F3 369 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 FBXO44Q9H4M3 255 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 ARHGEF3Q9NR81 526 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 INTS7Q9NVH2 962 aaKnown RBP10.79□□□□□ -0.68
TPM3-207ENST00000341372 IP6K2Q9UHH9 426 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 PCDHB4Q9Y5E5 795 aa10.79□□□□□ -0.68
TPM3-207ENST00000341372 TRAV19A0A0A6YYK7 116 aa10.78□□□□□ -0.68
TPM3-207ENST00000341372 C2orf78A6NCI8 922 aa10.78□□□□□ -0.68
TPM3-207ENST00000341372 RNF225M0QZC1 329 aaPredicted RBP10.78□□□□□ -0.68
TPM3-207ENST00000341372 CHADO15335 359 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms