RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 PCDHA3Q9Y5H8 950 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 TNPO3Q9Y5L0 923 aaKnown RBP7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 E7ENQ6 273 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 AKAP3O75969 853 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 SGPL1O95470 568 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 LTFP02788 710 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 GLI1P08151 1106 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 ZBTB48P10074 688 aaPredicted RBP7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 CXCR2P25025 360 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 HTR7P34969 479 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 COPAP53621 1224 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 MRPS6P82932 125 aaKnown RBP7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 CYLC2Q14093 348 aaPredicted RBP7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 GNA13Q14344 377 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 CNGA2Q16280 664 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 FAM110CQ1W6H9 321 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 GRTP1Q5TC63 336 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 FAM171A1Q5VUB5 890 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 ILDR2Q71H61 639 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 CREG2Q8IUH2 290 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 CLEC4FQ8N1N0 589 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 JADE3Q92613 823 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 TMA16Q96EY4 203 aaKnown RBP7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 NSL1Q96IY1 281 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 LACRTQ9GZZ8 138 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 EPS8L2Q9H6S3 715 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 ATP13A1Q9HD20 1204 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 NMRK2Q9NPI5 230 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 RBM22Q9NW64 420 aaKnown RBP eCLIP7.91□□□□□ -1.142e-6■■■■■ 27.8
ATP2B4-201ENST00000341360 NDUFA13Q9P0J0 144 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 UBR1Q8IWV7 1749 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 N4BP2Q86UW6 1770 aaPredicted RBP7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 TRDMT1O14717 391 aaKnown RBP7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 SLITRK3O94933 977 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 GUCA1CO95843 209 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 MYL4P12829 197 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 RRM2P31350 389 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 ATP5C1P36542 298 aaKnown RBP7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 CRYBB1P53674 252 aaPredicted RBP7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 MAP3K7CLP57077 242 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 ENPEPQ07075 957 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 LRRC74AQ0VAA2 488 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 ITIH4Q14624 930 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 FOXR1Q6PIV2 292 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 USP45Q70EL2 814 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 SH2D3CQ8N5H7 860 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 ANKRD27Q96NW4 1050 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 TAS2R13Q9NYV9 303 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 SNCAIPQ9Y6H5 919 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 NFAT5O94916 1531 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 MGAT4DA6NG13 374 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 C1QTNF3-AMACRE9PGA6 284 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 PSMD12O00232 456 aaPredicted RBP7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 CA12O43570 354 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 ENO3P13929 434 aaPredicted RBP7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 CYP2F1P24903 491 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 PSMA4P25789 261 aaKnown RBP7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 HNRNPH3P31942 346 aaKnown RBP7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 PEX5P50542 639 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 NDST1P52848 882 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 GRIK3Q13003 919 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 L3MBTL3Q96JM7 780 aaPredicted RBP7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 TSC22D3Q99576 134 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 GLIS2Q9BZE0 524 aaPredicted RBP7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 CEP44Q9C0F1 390 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 SNTG2Q9NY99 539 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 UBA2Q9UBT2 640 aaPredicted RBP7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 FAM153AQ9UHL3 310 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 DMGDHQ9UI17 866 aaKnown RBP7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 AURKCQ9UQB9 309 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 LMO7Q8WWI1 1683 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 TRAV19A0A0A6YYK7 116 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 UBXN8O00124 270 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 ZNF862O60290 1169 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 MAFO75444 373 aaPredicted RBP7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 SUPT7LO94864 414 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 JCHAINP01591 159 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 GPC1P35052 558 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 RPL3P39023 403 aaKnown RBP7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 VGLL4Q14135 290 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 RRP1BQ14684 758 aaKnown RBP7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 SMTNL2Q2TAL5 461 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 PAGE2BQ5JRK9 111 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 FAM46CQ5VWP2 391 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 CYB5D1Q6P9G0 228 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 MTSS1LQ765P7 747 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 SUSD6Q92537 303 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 EME1Q96AY2 570 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 FAXDC2Q96IV6 333 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 CCDC3Q9BQI4 270 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 POLR1EQ9GZS1 481 aaKnown RBP7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 SEMA6BQ9H3T3 888 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 ELOVL6Q9H5J4 265 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 VANGL2Q9ULK5 521 aa7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 COPG1Q9Y678 874 aaKnown RBP7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 MED1Q15648 1581 aaPredicted RBP7.91□□□□□ -1.14
ATP2B4-201ENST00000341360 KDM3BQ7LBC6 1761 aa7.9□□□□□ -1.14
ATP2B4-201ENST00000341360 DISP2A7MBM2 1401 aa7.9□□□□□ -1.14
ATP2B4-201ENST00000341360 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.9□□□□□ -1.14
ATP2B4-201ENST00000341360 F5H423 210 aaPredicted RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms