RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 PFDN4Q9NQP4 134 aa15.61■□□□□ 0.09
BRAT1-201ENST00000340611 DDX18Q9NVP1 670 aaKnown RBP15.61■□□□□ 0.09
BRAT1-201ENST00000340611 STOML1Q9UBI4 398 aa15.61■□□□□ 0.09
BRAT1-201ENST00000340611 TP73O15350 636 aa15.61■□□□□ 0.09
BRAT1-201ENST00000340611 ERBB2P04626 1255 aa15.61■□□□□ 0.09
BRAT1-201ENST00000340611 RPLP2P05387 115 aaKnown RBP15.61■□□□□ 0.09
BRAT1-201ENST00000340611 PFKMP08237 780 aa15.61■□□□□ 0.09
BRAT1-201ENST00000340611 TCF4P15884 667 aa15.61■□□□□ 0.09
BRAT1-201ENST00000340611 MMP8P22894 467 aa15.61■□□□□ 0.09
BRAT1-201ENST00000340611 KRT17Q04695 432 aa15.61■□□□□ 0.09
BRAT1-201ENST00000340611 MAMLD1Q13495 774 aa15.61■□□□□ 0.09
BRAT1-201ENST00000340611 CFAP157Q5JU67 520 aa15.61■□□□□ 0.09
BRAT1-201ENST00000340611 SPATA24Q86W54 205 aa15.61■□□□□ 0.09
BRAT1-201ENST00000340611 OXCT2Q9BYC2 517 aaPredicted RBP15.61■□□□□ 0.09
BRAT1-201ENST00000340611 B3GNT5Q9BYG0 378 aa15.61■□□□□ 0.09
BRAT1-201ENST00000340611 ROPN1BQ9BZX4 212 aaPredicted RBP15.61■□□□□ 0.09
BRAT1-201ENST00000340611 ROPN1Q9HAT0 212 aaPredicted RBP15.61■□□□□ 0.09
BRAT1-201ENST00000340611 PDP2Q9P2J9 529 aa15.61■□□□□ 0.09
BRAT1-201ENST00000340611 MTUS1Q9ULD2 1270 aa15.61■□□□□ 0.09
BRAT1-201ENST00000340611 TMEM98Q9Y2Y6 226 aa15.61■□□□□ 0.09
BRAT1-201ENST00000340611 SH3GLB1Q9Y371 365 aa15.61■□□□□ 0.09
BRAT1-201ENST00000340611 TTC3P53804 2025 aa15.61■□□□□ 0.09
BRAT1-201ENST00000340611 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.61■□□□□ 0.09
BRAT1-201ENST00000340611 CAPN9O14815 690 aa15.61■□□□□ 0.09
BRAT1-201ENST00000340611 NDUFB5O43674 189 aa15.61■□□□□ 0.09
BRAT1-201ENST00000340611 STAU1O95793 577 aaKnown RBP15.61■□□□□ 0.09
BRAT1-201ENST00000340611 CCDC166P0CW27 439 aa15.61■□□□□ 0.09
BRAT1-201ENST00000340611 FOXN2P32314 431 aa15.61■□□□□ 0.09
BRAT1-201ENST00000340611 CD300LGQ6UXG3 332 aa15.61■□□□□ 0.09
BRAT1-201ENST00000340611 SLC2A14Q8TDB8 520 aa15.61■□□□□ 0.09
BRAT1-201ENST00000340611 NDRG1Q92597 394 aaKnown RBP15.61■□□□□ 0.09
BRAT1-201ENST00000340611 MCEEQ96PE7 176 aa15.61■□□□□ 0.09
BRAT1-201ENST00000340611 TMEM209Q96SK2 561 aa15.61■□□□□ 0.09
BRAT1-201ENST00000340611 SYNCQ9H7C4 482 aa15.61■□□□□ 0.09
BRAT1-201ENST00000340611 TMEM39AQ9NV64 488 aa15.61■□□□□ 0.09
BRAT1-201ENST00000340611 WDR37Q9Y2I8 494 aa15.61■□□□□ 0.09
BRAT1-201ENST00000340611 GMEB1Q9Y692 573 aa15.61■□□□□ 0.09
BRAT1-201ENST00000340611 OR6B1O95007 311 aa15.6■□□□□ 0.09
BRAT1-201ENST00000340611 LYNP07948 512 aa15.6■□□□□ 0.09
BRAT1-201ENST00000340611 GPD2P43304 727 aa15.6■□□□□ 0.09
BRAT1-201ENST00000340611 OR1G1P47890 313 aa15.6■□□□□ 0.09
BRAT1-201ENST00000340611 SIX1Q15475 284 aaPredicted RBP15.6■□□□□ 0.09
BRAT1-201ENST00000340611 TAF5Q15542 800 aa15.6■□□□□ 0.09
BRAT1-201ENST00000340611 LIN52Q52LA3 116 aa15.6■□□□□ 0.09
BRAT1-201ENST00000340611 C11orf63Q6NUN7 778 aa15.6■□□□□ 0.09
BRAT1-201ENST00000340611 PMF1Q6P1K2 205 aa15.6■□□□□ 0.09
BRAT1-201ENST00000340611 GLB1LQ6UWU2 654 aa15.6■□□□□ 0.09
BRAT1-201ENST00000340611 TRMT10CQ7L0Y3 403 aaKnown RBP15.6■□□□□ 0.09
BRAT1-201ENST00000340611 SMYD1Q8NB12 490 aa15.6■□□□□ 0.09
BRAT1-201ENST00000340611 SPOCK2Q92563 424 aa15.6■□□□□ 0.09
BRAT1-201ENST00000340611 GATA6Q92908 595 aa15.6■□□□□ 0.09
BRAT1-201ENST00000340611 PGBD4Q96DM1 585 aa15.6■□□□□ 0.09
BRAT1-201ENST00000340611 SERPINB12Q96P63 405 aa15.6■□□□□ 0.09
BRAT1-201ENST00000340611 NR1H4Q96RI1 486 aaPredicted RBP15.6■□□□□ 0.09
BRAT1-201ENST00000340611 TXLNGQ9NUQ3 528 aa15.6■□□□□ 0.09
BRAT1-201ENST00000340611 TBC1D13Q9NVG8 400 aa15.6■□□□□ 0.09
BRAT1-201ENST00000340611 VDRP11473 427 aa15.6■□□□□ 0.09
BRAT1-201ENST00000340611 COL6A1P12109 1028 aa15.6■□□□□ 0.09
BRAT1-201ENST00000340611 CCNB1P14635 433 aa15.6■□□□□ 0.09
BRAT1-201ENST00000340611 OGDHQ02218 1023 aa15.6■□□□□ 0.09
BRAT1-201ENST00000340611 ISLR2Q6UXK2 745 aa15.6■□□□□ 0.09
BRAT1-201ENST00000340611 SLC15A3Q8IY34 581 aa15.6■□□□□ 0.09
BRAT1-201ENST00000340611 JOSD2Q8TAC2 188 aa15.6■□□□□ 0.09
BRAT1-201ENST00000340611 ACSF2Q96CM8 615 aaPredicted RBP15.6■□□□□ 0.09
BRAT1-201ENST00000340611 VWCEQ96DN2 955 aa15.6■□□□□ 0.09
BRAT1-201ENST00000340611 PCDH18Q9HCL0 1135 aa15.6■□□□□ 0.09
BRAT1-201ENST00000340611 SLC38A7Q9NVC3 462 aa15.6■□□□□ 0.09
BRAT1-201ENST00000340611 KLHL11Q9NVR0 708 aa15.6■□□□□ 0.09
BRAT1-201ENST00000340611 GDAP2Q9NXN4 497 aa15.6■□□□□ 0.09
BRAT1-201ENST00000340611 DDX43Q9NXZ2 648 aaKnown RBP15.6■□□□□ 0.09
BRAT1-201ENST00000340611 PCDHGC3Q9UN70 934 aa15.6■□□□□ 0.09
BRAT1-201ENST00000340611 CCDC160A6NGH7 325 aa15.59■□□□□ 0.09
BRAT1-201ENST00000340611 SIGLEC16A6NMB1 481 aa15.59■□□□□ 0.09
BRAT1-201ENST00000340611 OPHN1O60890 802 aa15.59■□□□□ 0.09
BRAT1-201ENST00000340611 GABBR2O75899 941 aa15.59■□□□□ 0.09
BRAT1-201ENST00000340611 BEST1O76090 585 aa15.59■□□□□ 0.09
BRAT1-201ENST00000340611 ACRP10323 421 aa15.59■□□□□ 0.09
BRAT1-201ENST00000340611 VARSP26640 1264 aaKnown RBP15.59■□□□□ 0.09
BRAT1-201ENST00000340611 ADARP55265 1226 aaKnown RBP15.59■□□□□ 0.09
BRAT1-201ENST00000340611 MAP7Q14244 749 aa15.59■□□□□ 0.09
BRAT1-201ENST00000340611 CLUL1Q15846 466 aa15.59■□□□□ 0.09
BRAT1-201ENST00000340611 RAB6CQ53S08 254 aa15.59■□□□□ 0.09
BRAT1-201ENST00000340611 SH2D4BQ5SQS7 431 aa15.59■□□□□ 0.09
BRAT1-201ENST00000340611 CCDC80Q76M96 950 aa15.59■□□□□ 0.09
BRAT1-201ENST00000340611 ANKRD33Q7Z3H0 272 aa15.59■□□□□ 0.09
BRAT1-201ENST00000340611 ZNF554Q86TJ5 538 aa15.59■□□□□ 0.09
BRAT1-201ENST00000340611 PHF13Q86YI8 300 aaPredicted RBP15.59■□□□□ 0.09
BRAT1-201ENST00000340611 CLEC4CQ8WTT0 213 aa15.59■□□□□ 0.09
BRAT1-201ENST00000340611 TRAIPQ9BWF2 469 aa15.59■□□□□ 0.09
BRAT1-201ENST00000340611 PITPNM3Q9BZ71 974 aa15.59■□□□□ 0.09
BRAT1-201ENST00000340611 MIS12Q9H081 205 aa15.59■□□□□ 0.09
BRAT1-201ENST00000340611 RAB6CQ9H0N0 254 aa15.59■□□□□ 0.09
BRAT1-201ENST00000340611 E5RJQ4 531 aa15.59■□□□□ 0.09
BRAT1-201ENST00000340611 MDH1BQ5I0G3 518 aa15.59■□□□□ 0.09
BRAT1-201ENST00000340611 C14orf80Q86SX3 495 aa15.59■□□□□ 0.09
BRAT1-201ENST00000340611 SRPK1Q96SB4 655 aaKnown RBP15.59■□□□□ 0.09
BRAT1-201ENST00000340611 FAM118BQ9BPY3 351 aa15.59■□□□□ 0.09
BRAT1-201ENST00000340611 CHST7Q9NS84 486 aa15.59■□□□□ 0.09
BRAT1-201ENST00000340611 NKIRAS1Q9NYS0 192 aa15.59■□□□□ 0.09
BRAT1-201ENST00000340611 MYBPHLA2RUH7 354 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms