RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 PLAC1Q9HBJ0 212 aa14.85□□□□□ -0.03
CPSF7-201ENST00000340437 ZNF212Q9UDV6 495 aa14.85□□□□□ -0.03
CPSF7-201ENST00000340437 HMX2A2RU54 273 aa14.85□□□□□ -0.03
CPSF7-201ENST00000340437 AIM2O14862 343 aa14.85□□□□□ -0.03
CPSF7-201ENST00000340437 TM7SF2O76062 418 aa14.85□□□□□ -0.03
CPSF7-201ENST00000340437 CCDC130P13994 396 aa14.85□□□□□ -0.03
CPSF7-201ENST00000340437 ENPEPQ07075 957 aa14.85□□□□□ -0.03
CPSF7-201ENST00000340437 NME3Q13232 169 aa14.85□□□□□ -0.03
CPSF7-201ENST00000340437 NXNQ6DKJ4 435 aa14.85□□□□□ -0.03
CPSF7-201ENST00000340437 HPS6Q86YV9 775 aa14.85□□□□□ -0.03
CPSF7-201ENST00000340437 OXCT2Q9BYC2 517 aaPredicted RBP14.85□□□□□ -0.03
CPSF7-201ENST00000340437 FAM49AQ9H0Q0 323 aaPredicted RBP14.85□□□□□ -0.03
CPSF7-201ENST00000340437 CAB39LQ9H9S4 337 aa14.85□□□□□ -0.03
CPSF7-201ENST00000340437 FIS1Q9Y3D6 152 aa14.85□□□□□ -0.03
CPSF7-201ENST00000340437 C19orf81C9J6K1 198 aa14.84□□□□□ -0.03
CPSF7-201ENST00000340437 ATP9BO43861 1147 aa14.84□□□□□ -0.03
CPSF7-201ENST00000340437 SERPINB5P36952 375 aa14.84□□□□□ -0.03
CPSF7-201ENST00000340437 SLC10A6Q3KNW5 377 aa14.84□□□□□ -0.03
CPSF7-201ENST00000340437 DNAAF3Q8N9W5 541 aa14.84□□□□□ -0.03
CPSF7-201ENST00000340437 COLGALT1Q8NBJ5 622 aa14.84□□□□□ -0.03
CPSF7-201ENST00000340437 TRPM4Q8TD43 1214 aa14.84□□□□□ -0.03
CPSF7-201ENST00000340437 FAM136AQ96C01 138 aa14.84□□□□□ -0.03
CPSF7-201ENST00000340437 SIGLEC10Q96LC7 697 aa14.84□□□□□ -0.03
CPSF7-201ENST00000340437 XPNPEP3Q9NQH7 507 aa14.84□□□□□ -0.03
CPSF7-201ENST00000340437 BARX2Q9UMQ3 279 aaPredicted RBP14.84□□□□□ -0.03
CPSF7-201ENST00000340437 AP4E1Q9UPM8 1137 aa14.84□□□□□ -0.03
CPSF7-201ENST00000340437 A8MXQ7 604 aa14.84□□□□□ -0.03
CPSF7-201ENST00000340437 SMAPO00193 183 aa14.84□□□□□ -0.03
CPSF7-201ENST00000340437 ABLIM1O14639 778 aa14.84□□□□□ -0.03
CPSF7-201ENST00000340437 INSRRP14616 1297 aa14.84□□□□□ -0.03
CPSF7-201ENST00000340437 TSHZ1Q6ZSZ6 1077 aa14.84□□□□□ -0.03
CPSF7-201ENST00000340437 CYP4V2Q6ZWL3 525 aaPredicted RBP14.84□□□□□ -0.03
CPSF7-201ENST00000340437 TP53INP2Q8IXH6 220 aa14.84□□□□□ -0.03
CPSF7-201ENST00000340437 CCDC185Q8N715 623 aa14.84□□□□□ -0.03
CPSF7-201ENST00000340437 ADAM32Q8TC27 787 aa14.84□□□□□ -0.03
CPSF7-201ENST00000340437 GPR20Q99678 358 aa14.84□□□□□ -0.03
CPSF7-201ENST00000340437 ECSITQ9BQ95 431 aa14.84□□□□□ -0.03
CPSF7-201ENST00000340437 DPEP3Q9H4B8 488 aa14.84□□□□□ -0.03
CPSF7-201ENST00000340437 THAP1Q9NVV9 213 aa14.84□□□□□ -0.03
CPSF7-201ENST00000340437 UBP1Q9NZI7 540 aa14.84□□□□□ -0.03
CPSF7-201ENST00000340437 SOX13Q9UN79 622 aa14.84□□□□□ -0.03
CPSF7-201ENST00000340437 LYNP07948 512 aa14.84□□□□□ -0.03
CPSF7-201ENST00000340437 OAZ1P54368 228 aa14.84□□□□□ -0.03
CPSF7-201ENST00000340437 RBBP5Q15291 538 aaKnown RBP14.84□□□□□ -0.03
CPSF7-201ENST00000340437 PID1Q7Z2X4 250 aa14.84□□□□□ -0.03
CPSF7-201ENST00000340437 SDCCAG8Q86SQ7 713 aaPredicted RBP14.84□□□□□ -0.03
CPSF7-201ENST00000340437 TTC30AQ86WT1 665 aa14.84□□□□□ -0.03
CPSF7-201ENST00000340437 PIWIL2Q8TC59 973 aaKnown RBP14.84□□□□□ -0.03
CPSF7-201ENST00000340437 AK5Q9Y6K8 562 aa14.84□□□□□ -0.03
CPSF7-201ENST00000340437 A0A1B0GVG6 124 aa14.83□□□□□ -0.04
CPSF7-201ENST00000340437 HSPA4LO95757 839 aa14.83□□□□□ -0.04
CPSF7-201ENST00000340437 ZNF286BP0CG31 522 aa14.83□□□□□ -0.04
CPSF7-201ENST00000340437 TCN1P20061 433 aaPredicted RBP14.83□□□□□ -0.04
CPSF7-201ENST00000340437 DLG2Q15700 870 aa14.83□□□□□ -0.04
CPSF7-201ENST00000340437 FOXB2Q5VYV0 432 aa14.83□□□□□ -0.04
CPSF7-201ENST00000340437 ZNF772Q68DY9 489 aaPredicted RBP14.83□□□□□ -0.04
CPSF7-201ENST00000340437 CDKL3Q8IVW4 592 aaPredicted RBP14.83□□□□□ -0.04
CPSF7-201ENST00000340437 DNERQ8NFT8 737 aa14.83□□□□□ -0.04
CPSF7-201ENST00000340437 CDKL2Q92772 493 aa14.83□□□□□ -0.04
CPSF7-201ENST00000340437 FAM167AQ96KS9 214 aa14.83□□□□□ -0.04
CPSF7-201ENST00000340437 C7orf26Q96N11 449 aa14.83□□□□□ -0.04
CPSF7-201ENST00000340437 KLK14Q9P0G3 267 aa14.83□□□□□ -0.04
CPSF7-201ENST00000340437 TMEM216Q9P0N5 145 aa14.83□□□□□ -0.04
CPSF7-201ENST00000340437 CAPN14A8MX76 684 aa14.83□□□□□ -0.04
CPSF7-201ENST00000340437 PAPSS1O43252 624 aaPredicted RBP14.83□□□□□ -0.04
CPSF7-201ENST00000340437 COPAP53621 1224 aa14.83□□□□□ -0.04
CPSF7-201ENST00000340437 HDAC4P56524 1084 aa14.83□□□□□ -0.04
CPSF7-201ENST00000340437 MBTD1Q05BQ5 628 aa14.83□□□□□ -0.04
CPSF7-201ENST00000340437 TRMT5Q32P41 509 aaKnown RBP14.83□□□□□ -0.04
CPSF7-201ENST00000340437 DNAL1Q4LDG9 190 aa14.83□□□□□ -0.04
CPSF7-201ENST00000340437 OR52E8Q6IFG1 317 aa14.83□□□□□ -0.04
CPSF7-201ENST00000340437 BCO2Q9BYV7 579 aa14.83□□□□□ -0.04
CPSF7-201ENST00000340437 RPS6KL1Q9Y6S9 549 aa14.83□□□□□ -0.04
CPSF7-201ENST00000340437 TPH1P17752 444 aa14.82□□□□□ -0.04
CPSF7-201ENST00000340437 ARF4P18085 180 aaPredicted RBP14.82□□□□□ -0.04
CPSF7-201ENST00000340437 CDC16Q13042 620 aa14.82□□□□□ -0.04
CPSF7-201ENST00000340437 PDE1CQ14123 709 aaPredicted RBP14.82□□□□□ -0.04
CPSF7-201ENST00000340437 EFHC1Q5JVL4 640 aa14.82□□□□□ -0.04
CPSF7-201ENST00000340437 PHTF2Q8N3S3 785 aa14.82□□□□□ -0.04
CPSF7-201ENST00000340437 MARK4Q96L34 752 aa14.82□□□□□ -0.04
CPSF7-201ENST00000340437 SPATC1LQ9H0A9 340 aa14.82□□□□□ -0.04
CPSF7-201ENST00000340437 SIRPGQ9P1W8 387 aa14.82□□□□□ -0.04
CPSF7-201ENST00000340437 GLRBP48167 497 aa14.82□□□□□ -0.04
CPSF7-201ENST00000340437 PDK2Q15119 407 aa14.82□□□□□ -0.04
CPSF7-201ENST00000340437 SPDYAQ5MJ70 313 aa14.82□□□□□ -0.04
CPSF7-201ENST00000340437 PDPK2PQ6A1A2 396 aa14.82□□□□□ -0.04
CPSF7-201ENST00000340437 ILDR2Q71H61 639 aa14.82□□□□□ -0.04
CPSF7-201ENST00000340437 NET1Q7Z628 596 aaPredicted RBP14.82□□□□□ -0.04
CPSF7-201ENST00000340437 CHST13Q8NET6 341 aa14.82□□□□□ -0.04
CPSF7-201ENST00000340437 CCDC106Q9BWC9 280 aa14.82□□□□□ -0.04
CPSF7-201ENST00000340437 ELP3Q9H9T3 547 aa14.82□□□□□ -0.04
CPSF7-201ENST00000340437 ZBTB42B2RXF5 422 aa14.82□□□□□ -0.04
CPSF7-201ENST00000340437 SIN3BO75182 1162 aa14.82□□□□□ -0.04
CPSF7-201ENST00000340437 IL18RAPO95256 599 aa14.82□□□□□ -0.04
CPSF7-201ENST00000340437 PSMB4P28070 264 aa14.82□□□□□ -0.04
CPSF7-201ENST00000340437 PEX2P28328 305 aa14.82□□□□□ -0.04
CPSF7-201ENST00000340437 ICAM3P32942 547 aa14.82□□□□□ -0.04
CPSF7-201ENST00000340437 ARL4AP40617 200 aa14.82□□□□□ -0.04
CPSF7-201ENST00000340437 ACTR3P61158 418 aa14.82□□□□□ -0.04
CPSF7-201ENST00000340437 RBP5P82980 135 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms