RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 ASNSD1Q9NWL6 643 aa13.89□□□□□ -0.19
SIRPB3P-201ENST00000340424 PLK2Q9NYY3 685 aa13.89□□□□□ -0.19
SIRPB3P-201ENST00000340424 DCHS1Q96JQ0 3298 aa13.89□□□□□ -0.19
SIRPB3P-201ENST00000340424 FOXN3O00409 490 aaPredicted RBP13.88□□□□□ -0.19
SIRPB3P-201ENST00000340424 PAPSS1O43252 624 aaPredicted RBP13.88□□□□□ -0.19
SIRPB3P-201ENST00000340424 MSI1O43347 362 aaKnown RBP13.88□□□□□ -0.19
SIRPB3P-201ENST00000340424 TIMM44O43615 452 aa13.88□□□□□ -0.19
SIRPB3P-201ENST00000340424 EPN2O95208 641 aa13.88□□□□□ -0.19
SIRPB3P-201ENST00000340424 HOXB2P14652 356 aa13.88□□□□□ -0.19
SIRPB3P-201ENST00000340424 UCHL3P15374 230 aa13.88□□□□□ -0.19
SIRPB3P-201ENST00000340424 TBX4P57082 545 aa13.88□□□□□ -0.19
SIRPB3P-201ENST00000340424 YWHAZP63104 245 aaKnown RBP13.88□□□□□ -0.19
SIRPB3P-201ENST00000340424 MYL5Q02045 173 aa13.88□□□□□ -0.19
SIRPB3P-201ENST00000340424 APBA1Q02410 837 aa13.88□□□□□ -0.19
SIRPB3P-201ENST00000340424 MTA1Q13330 715 aa13.88□□□□□ -0.19
SIRPB3P-201ENST00000340424 CSRP2Q16527 193 aa13.88□□□□□ -0.19
SIRPB3P-201ENST00000340424 LPAL2Q16609 132 aa13.88□□□□□ -0.19
SIRPB3P-201ENST00000340424 PLK5Q496M5 336 aa13.88□□□□□ -0.19
SIRPB3P-201ENST00000340424 HSP90AA4PQ58FG1 418 aa13.88□□□□□ -0.19
SIRPB3P-201ENST00000340424 EFHC1Q5JVL4 640 aa13.88□□□□□ -0.19
SIRPB3P-201ENST00000340424 FKBP15Q5T1M5 1219 aa13.88□□□□□ -0.19
SIRPB3P-201ENST00000340424 EMC10Q5UCC4 262 aa13.88□□□□□ -0.19
SIRPB3P-201ENST00000340424 TOGARAM2Q6ZUX3 1019 aa13.88□□□□□ -0.19
SIRPB3P-201ENST00000340424 ZDHHC17Q8IUH5 632 aa13.88□□□□□ -0.19
SIRPB3P-201ENST00000340424 MDGA1Q8NFP4 955 aa13.88□□□□□ -0.19
SIRPB3P-201ENST00000340424 OLIG1Q8TAK6 271 aa13.88□□□□□ -0.19
SIRPB3P-201ENST00000340424 DQX1Q8TE96 717 aaKnown RBP13.88□□□□□ -0.19
SIRPB3P-201ENST00000340424 BHMTQ93088 406 aa13.88□□□□□ -0.19
SIRPB3P-201ENST00000340424 PPP1R13BQ96KQ4 1090 aa13.88□□□□□ -0.19
SIRPB3P-201ENST00000340424 GABRG3Q99928 467 aa13.88□□□□□ -0.19
SIRPB3P-201ENST00000340424 SCUBE2Q9NQ36 999 aa13.88□□□□□ -0.19
SIRPB3P-201ENST00000340424 TMEM51Q9NW97 253 aa13.88□□□□□ -0.19
SIRPB3P-201ENST00000340424 BCCIPQ9P287 314 aaKnown RBP eCLIP13.88□□□□□ -0.19
SIRPB3P-201ENST00000340424 USP18Q9UMW8 372 aa13.88□□□□□ -0.19
SIRPB3P-201ENST00000340424 EML5Q05BV3 1969 aa13.87□□□□□ -0.19
SIRPB3P-201ENST00000340424 SPAG17Q6Q759 2223 aa13.87□□□□□ -0.19
SIRPB3P-201ENST00000340424 TCRBV21S2A2A0A5A6 115 aa13.87□□□□□ -0.19
SIRPB3P-201ENST00000340424 TYW5A2RUC4 315 aaKnown RBP13.87□□□□□ -0.19
SIRPB3P-201ENST00000340424 PRRT4C9JH25 899 aa13.87□□□□□ -0.19
SIRPB3P-201ENST00000340424 TRIM24O15164 1050 aa13.87□□□□□ -0.19
SIRPB3P-201ENST00000340424 HSF2BPO75031 334 aa13.87□□□□□ -0.19
SIRPB3P-201ENST00000340424 FYNP06241 537 aa13.87□□□□□ -0.19
SIRPB3P-201ENST00000340424 TGM1P22735 817 aa13.87□□□□□ -0.19
SIRPB3P-201ENST00000340424 HOXC13P31276 330 aa13.87□□□□□ -0.19
SIRPB3P-201ENST00000340424 CLCN1P35523 988 aa13.87□□□□□ -0.19
SIRPB3P-201ENST00000340424 ID4P47928 161 aa13.87□□□□□ -0.19
SIRPB3P-201ENST00000340424 KCNMA1Q12791 1236 aa13.87□□□□□ -0.19
SIRPB3P-201ENST00000340424 RAPGEF1Q13905 1077 aa13.87□□□□□ -0.19
SIRPB3P-201ENST00000340424 SPDYCQ5MJ68 293 aa13.87□□□□□ -0.19
SIRPB3P-201ENST00000340424 EGFLAMQ63HQ2 1017 aa13.87□□□□□ -0.19
SIRPB3P-201ENST00000340424 DPY19L2P1Q6NXN4 242 aa13.87□□□□□ -0.19
SIRPB3P-201ENST00000340424 KBTBD6Q86V97 674 aa13.87□□□□□ -0.19
SIRPB3P-201ENST00000340424 SLC47A2Q86VL8 602 aa13.87□□□□□ -0.19
SIRPB3P-201ENST00000340424 PLPP6Q8IY26 295 aa13.87□□□□□ -0.19
SIRPB3P-201ENST00000340424 WFIKKN2Q8TEU8 576 aa13.87□□□□□ -0.19
SIRPB3P-201ENST00000340424 IPO4Q8TEX9 1081 aaKnown RBP13.87□□□□□ -0.19
SIRPB3P-201ENST00000340424 TMA16Q96EY4 203 aaKnown RBP13.87□□□□□ -0.19
SIRPB3P-201ENST00000340424 PIWIL1Q96J94 861 aaKnown RBP13.87□□□□□ -0.19
SIRPB3P-201ENST00000340424 NAA15Q9BXJ9 866 aaKnown RBP13.87□□□□□ -0.19
SIRPB3P-201ENST00000340424 STK33Q9BYT3 514 aa13.87□□□□□ -0.19
SIRPB3P-201ENST00000340424 NAT10Q9H0A0 1025 aaKnown RBP13.87□□□□□ -0.19
SIRPB3P-201ENST00000340424 ACP6Q9NPH0 428 aa13.87□□□□□ -0.19
SIRPB3P-201ENST00000340424 SEMA4GQ9NTN9 838 aa13.87□□□□□ -0.19
SIRPB3P-201ENST00000340424 CYTH4Q9UIA0 394 aa13.87□□□□□ -0.19
SIRPB3P-201ENST00000340424 SPTBN4Q9H254 2564 aa13.86□□□□□ -0.19
SIRPB3P-201ENST00000340424 DNAH14Q0VDD8 3507 aa13.86□□□□□ -0.19
SIRPB3P-201ENST00000340424 ACSL4O60488 711 aa13.86□□□□□ -0.19
SIRPB3P-201ENST00000340424 LSM8O95777 96 aaKnown RBP13.86□□□□□ -0.19
SIRPB3P-201ENST00000340424 IGLV3-25P01717 112 aa13.86□□□□□ -0.19
SIRPB3P-201ENST00000340424 APOEP02649 317 aa13.86□□□□□ -0.19
SIRPB3P-201ENST00000340424 SLC2A3P11169 496 aa13.86□□□□□ -0.19
SIRPB3P-201ENST00000340424 HOXD9P28356 352 aaPredicted RBP13.86□□□□□ -0.19
SIRPB3P-201ENST00000340424 FOXK2Q01167 660 aa13.86□□□□□ -0.19
SIRPB3P-201ENST00000340424 SPEM2Q0P670 501 aa13.86□□□□□ -0.19
SIRPB3P-201ENST00000340424 PUM1Q14671 1186 aaKnown RBP eCLIP13.86□□□□□ -0.19
SIRPB3P-201ENST00000340424 STARD3Q14849 445 aa13.86□□□□□ -0.19
SIRPB3P-201ENST00000340424 DRAP1Q14919 205 aaPredicted RBP13.86□□□□□ -0.19
SIRPB3P-201ENST00000340424 KRT31Q15323 416 aa13.86□□□□□ -0.19
SIRPB3P-201ENST00000340424 PMS2CLQ68D20 193 aa13.86□□□□□ -0.19
SIRPB3P-201ENST00000340424 RNF43Q68DV7 783 aa13.86□□□□□ -0.19
SIRPB3P-201ENST00000340424 C11orf57Q6ZUT1 292 aaPredicted RBP13.86□□□□□ -0.19
SIRPB3P-201ENST00000340424 ERMP1Q7Z2K6 904 aa13.86□□□□□ -0.19
SIRPB3P-201ENST00000340424 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.86□□□□□ -0.19
SIRPB3P-201ENST00000340424 HJURPQ8NCD3 748 aaPredicted RBP13.86□□□□□ -0.19
SIRPB3P-201ENST00000340424 TMEM35BQ8NCS4 154 aa13.86□□□□□ -0.19
SIRPB3P-201ENST00000340424 MSANTD4Q8NCY6 345 aa13.86□□□□□ -0.19
SIRPB3P-201ENST00000340424 C1orf131Q8NDD1 294 aaKnown RBP13.86□□□□□ -0.19
SIRPB3P-201ENST00000340424 HMGB4Q8WW32 186 aa13.86□□□□□ -0.19
SIRPB3P-201ENST00000340424 SLC39A13Q96H72 371 aa13.86□□□□□ -0.19
SIRPB3P-201ENST00000340424 FCRL2Q96LA5 508 aaPredicted RBP13.86□□□□□ -0.19
SIRPB3P-201ENST00000340424 CPXM1Q96SM3 734 aa13.86□□□□□ -0.19
SIRPB3P-201ENST00000340424 LSM14BQ9BX40 385 aaKnown RBP13.86□□□□□ -0.19
SIRPB3P-201ENST00000340424 TPSD1Q9BZJ3 242 aa13.86□□□□□ -0.19
SIRPB3P-201ENST00000340424 DUSP15Q9H1R2 295 aaPredicted RBP13.86□□□□□ -0.19
SIRPB3P-201ENST00000340424 PDCL3Q9H2J4 239 aa13.86□□□□□ -0.19
SIRPB3P-201ENST00000340424 SYNCQ9H7C4 482 aa13.86□□□□□ -0.19
SIRPB3P-201ENST00000340424 TAB2Q9NYJ8 693 aa13.86□□□□□ -0.19
SIRPB3P-201ENST00000340424 RRN3Q9NYV6 651 aa13.86□□□□□ -0.19
SIRPB3P-201ENST00000340424 AJAP1Q9UKB5 411 aaPredicted RBP13.86□□□□□ -0.19
SIRPB3P-201ENST00000340424 HCN2Q9UL51 889 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms