RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 CXCR5P32302 372 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 ELF1P32519 619 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 ETFBP38117 255 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 EIF3BP55884 814 aaKnown RBP7.43□□□□□ -1.22
NUP43-201ENST00000340413 YBEYP58557 167 aaPredicted RBP7.43□□□□□ -1.22
NUP43-201ENST00000340413 GALNT2Q10471 571 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 CCDC142Q17RM4 750 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 SLC45A4Q5BKX6 768 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 RALGPS1Q5JS13 557 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 BEND6Q5SZJ8 279 aaPredicted RBP7.43□□□□□ -1.22
NUP43-201ENST00000340413 RHBDF2Q6PJF5 856 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 RFX8Q6ZV50 586 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 TRMT10CQ7L0Y3 403 aaKnown RBP7.43□□□□□ -1.22
NUP43-201ENST00000340413 METTL3Q86U44 580 aaKnown RBP7.43□□□□□ -1.22
NUP43-201ENST00000340413 RFX6Q8HWS3 928 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 ZNF683Q8IZ20 524 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 VPS52Q8N1B4 723 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 CPXM2Q8N436 756 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 PQLC3Q8N755 202 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 PLD5Q8N7P1 536 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 MRPL43Q8N983 215 aaKnown RBP7.43□□□□□ -1.22
NUP43-201ENST00000340413 P3H4Q92791 437 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 LRRC39Q96DD0 335 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 PIWIL1Q96J94 861 aaKnown RBP7.43□□□□□ -1.22
NUP43-201ENST00000340413 TTC25Q96NG3 672 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 KCNK16Q96T55 309 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 TLR9Q9NR96 1032 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 TMEM248Q9NWD8 314 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 ANAPC1Q9H1A4 1944 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 LINC01553A4QN01 128 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 OAS1P00973 400 aaKnown RBP7.42□□□□□ -1.22
NUP43-201ENST00000340413 ATF6P18850 670 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 MPP7Q5T2T1 576 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 HECTD3Q5T447 861 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 DNAAF5Q86Y56 855 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 SLC7A14Q8TBB6 771 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 FAM149B1Q96BN6 582 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 PRMT1Q99873 361 aaKnown RBP7.42□□□□□ -1.22
NUP43-201ENST00000340413 ZDHHC18Q9NUE0 388 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 OBP2AQ9NY56 170 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 EEF2KO00418 725 aaKnown RBP7.42□□□□□ -1.22
NUP43-201ENST00000340413 DNALI1O14645 258 aaPredicted RBP7.42□□□□□ -1.22
NUP43-201ENST00000340413 TLL1O43897 1013 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 CACNG3O60359 315 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 OPHN1O60890 802 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 SPAG6O75602 509 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 TCEA3O75764 348 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 RARGP13631 454 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 CES1P23141 567 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 TBX4P57082 545 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 SMAD3P84022 425 aaKnown RBP7.42□□□□□ -1.22
NUP43-201ENST00000340413 MLLT1Q03111 559 aaPredicted RBP7.42□□□□□ -1.22
NUP43-201ENST00000340413 GPS2Q13227 327 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 C15orf59Q2T9L4 293 aaPredicted RBP7.42□□□□□ -1.22
NUP43-201ENST00000340413 LLGL2Q6P1M3 1020 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 RSPO2Q6UXX9 243 aaPredicted RBP7.42□□□□□ -1.22
NUP43-201ENST00000340413 UMODL1-AS1Q8N2C9 162 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 SPPL3Q8TCT6 385 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 CLEC4CQ8WTT0 213 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 GOLPH3Q9H4A6 298 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 PIGVQ9NUD9 493 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 NEU3Q9UQ49 428 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 NAALADL1Q9UQQ1 740 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 CHD5Q8TDI0 1954 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 A0A1W2PQH9 124 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 C2orf71A6NGG8 1288 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 GFRA2O00451 464 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 CST8O60676 142 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 IGFBP6P24592 240 aaPredicted RBP7.42□□□□□ -1.22
NUP43-201ENST00000340413 CCNCP24863 283 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 OR1D2P34982 312 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 ATP5C1P36542 298 aaKnown RBP7.42□□□□□ -1.22
NUP43-201ENST00000340413 MLLT6P55198 1093 aaPredicted RBP7.42□□□□□ -1.22
NUP43-201ENST00000340413 IFI35P80217 286 aaPredicted RBP7.42□□□□□ -1.22
NUP43-201ENST00000340413 PPIDQ08752 370 aaKnown RBP7.42□□□□□ -1.22
NUP43-201ENST00000340413 RFTN1Q14699 578 aaPredicted RBP7.42□□□□□ -1.22
NUP43-201ENST00000340413 NCBP2-AS2Q69YL0 99 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 TTC27Q6P3X3 843 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 TAS1R1Q7RTX1 841 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 CCDC105Q8IYK2 499 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 PCDH19Q8TAB3 1148 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 HASPINQ8TF76 798 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 CASKIN2Q8WXE0 1202 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 OTUB2Q96DC9 234 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 LPIN3Q9BQK8 851 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 LRRC3Q9BY71 257 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 ARHGEF4Q9NR80 690 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 DDIT4Q9NX09 232 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 IGSF9Q9P2J2 1179 aa7.42□□□□□ -1.22
NUP43-201ENST00000340413 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.41□□□□□ -1.22
NUP43-201ENST00000340413 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.41□□□□□ -1.22
NUP43-201ENST00000340413 ZNF840PA6NDX5 716 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 ZMYND10O75800 440 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 F11P03951 625 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 CALCOCO2Q13137 446 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 ZNF211Q13398 564 aaPredicted RBP7.41□□□□□ -1.22
NUP43-201ENST00000340413 PARP15Q460N3 678 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 PAN2Q504Q3 1202 aaKnown RBP7.41□□□□□ -1.22
NUP43-201ENST00000340413 ARTNQ5T4W7 220 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 HIBCHQ6NVY1 386 aaPredicted RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms