RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 GBP1P32455 592 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 FLT3P36888 993 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 SLC11A2P49281 568 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 SULT1E1P49888 294 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 KDSRQ06136 332 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 TDRD12Q587J7 1177 aaKnown RBP15.85■□□□□ 0.13
UBE3B-201ENST00000340074 OTUD1Q5VV17 481 aaPredicted RBP15.85■□□□□ 0.13
UBE3B-201ENST00000340074 FYB2Q5VWT5 728 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 NADSYN1Q6IA69 706 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 ARCQ7LC44 396 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 C1orf210Q8IVY1 113 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 SFTPA1Q8IWL2 248 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 NT5C3BQ969T7 300 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 AZIN2Q96A70 460 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 XPO6Q96QU8 1125 aaKnown RBP15.85■□□□□ 0.13
UBE3B-201ENST00000340074 PRRX2Q99811 253 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 TRIM5Q9C035 493 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 ARHGEF4Q9NR80 690 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 DNAJC17Q9NVM6 304 aaKnown RBP15.85■□□□□ 0.13
UBE3B-201ENST00000340074 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.85■□□□□ 0.13
UBE3B-201ENST00000340074 DEC1Q9P2X7 70 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 STAP1Q9ULZ2 295 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 FANCMQ8IYD8 2048 aa15.84■□□□□ 0.13
UBE3B-201ENST00000340074 MUC6Q6W4X9 2439 aa15.84■□□□□ 0.13
UBE3B-201ENST00000340074 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.84■□□□□ 0.13
UBE3B-201ENST00000340074 K7EQS6 105 aa15.84■□□□□ 0.13
UBE3B-201ENST00000340074 DDX3XO00571 662 aaKnown RBP eCLIP15.84■□□□□ 0.131e-7■■■□□ 18.1
UBE3B-201ENST00000340074 RNF40O75150 1001 aa15.84■□□□□ 0.13
UBE3B-201ENST00000340074 KAT7O95251 611 aa15.84■□□□□ 0.13
UBE3B-201ENST00000340074 PENKP01210 267 aaPredicted RBP15.84■□□□□ 0.13
UBE3B-201ENST00000340074 APOEP02649 317 aa15.84■□□□□ 0.13
UBE3B-201ENST00000340074 CYBBP04839 570 aa15.84■□□□□ 0.13
UBE3B-201ENST00000340074 APODP05090 189 aa15.84■□□□□ 0.13
UBE3B-201ENST00000340074 PLEKP08567 350 aaPredicted RBP15.84■□□□□ 0.13
UBE3B-201ENST00000340074 SLC6A4P31645 630 aa15.84■□□□□ 0.13
UBE3B-201ENST00000340074 GSCP56915 257 aaPredicted RBP15.84■□□□□ 0.13
UBE3B-201ENST00000340074 C1QBPQ07021 282 aaKnown RBP15.84■□□□□ 0.13
UBE3B-201ENST00000340074 TRIM14Q14142 442 aa15.84■□□□□ 0.13
UBE3B-201ENST00000340074 SLC25A52Q3SY17 297 aa15.84■□□□□ 0.13
UBE3B-201ENST00000340074 FAM133BQ5BKY9 247 aaKnown RBP15.84■□□□□ 0.13
UBE3B-201ENST00000340074 RFWD3Q6PCD5 774 aa15.84■□□□□ 0.13
UBE3B-201ENST00000340074 DNAAF5Q86Y56 855 aa15.84■□□□□ 0.13
UBE3B-201ENST00000340074 MCOLN2Q8IZK6 566 aa15.84■□□□□ 0.13
UBE3B-201ENST00000340074 PHTF2Q8N3S3 785 aa15.84■□□□□ 0.13
UBE3B-201ENST00000340074 SYNPOQ8N3V7 929 aa15.84■□□□□ 0.13
UBE3B-201ENST00000340074 EMC1Q8N766 993 aa15.84■□□□□ 0.13
UBE3B-201ENST00000340074 DDI1Q8WTU0 396 aa15.84■□□□□ 0.13
UBE3B-201ENST00000340074 CFAP57Q96MR6 1250 aa15.84■□□□□ 0.13
UBE3B-201ENST00000340074 TBCBQ99426 244 aa15.84■□□□□ 0.13
UBE3B-201ENST00000340074 KCNH6Q9H252 994 aa15.84■□□□□ 0.13
UBE3B-201ENST00000340074 PIGVQ9NUD9 493 aa15.84■□□□□ 0.13
UBE3B-201ENST00000340074 RRN3Q9NYV6 651 aa15.84■□□□□ 0.13
UBE3B-201ENST00000340074 XPO7Q9UIA9 1087 aaKnown RBP15.84■□□□□ 0.13
UBE3B-201ENST00000340074 BZW2Q9Y6E2 419 aaKnown RBP15.84■□□□□ 0.13
UBE3B-201ENST00000340074 DOCK4Q8N1I0 1966 aa15.83■□□□□ 0.13
UBE3B-201ENST00000340074 ANTXRLA6NF34 631 aa15.83■□□□□ 0.12
UBE3B-201ENST00000340074 KCNU1A8MYU2 1149 aa15.83■□□□□ 0.12
UBE3B-201ENST00000340074 GFRA2O00451 464 aa15.83■□□□□ 0.12
UBE3B-201ENST00000340074 SERPING1P05155 500 aa15.83■□□□□ 0.12
UBE3B-201ENST00000340074 KRT3P12035 628 aa15.83■□□□□ 0.12
UBE3B-201ENST00000340074 CCR1P32246 355 aa15.83■□□□□ 0.12
UBE3B-201ENST00000340074 SGSHP51688 502 aa15.83■□□□□ 0.12
UBE3B-201ENST00000340074 TCF15Q12870 199 aa15.83■□□□□ 0.12
UBE3B-201ENST00000340074 ANGPT1Q15389 498 aa15.83■□□□□ 0.12
UBE3B-201ENST00000340074 FBXO43Q4G163 708 aa15.83■□□□□ 0.12
UBE3B-201ENST00000340074 MPPE1Q53F39 396 aa15.83■□□□□ 0.12
UBE3B-201ENST00000340074 C3orf20Q8ND61 904 aa15.83■□□□□ 0.12
UBE3B-201ENST00000340074 JOSD2Q8TAC2 188 aa15.83■□□□□ 0.12
UBE3B-201ENST00000340074 RNF34Q969K3 372 aa15.83■□□□□ 0.12
UBE3B-201ENST00000340074 BTN2A3PQ96KV6 586 aa15.83■□□□□ 0.12
UBE3B-201ENST00000340074 IER2Q9BTL4 223 aa15.83■□□□□ 0.12
UBE3B-201ENST00000340074 SELENOOQ9BVL4 669 aa15.83■□□□□ 0.12
UBE3B-201ENST00000340074 MYO15AQ9UKN7 3530 aa15.83■□□□□ 0.12
UBE3B-201ENST00000340074 A0A0A0MRY4 1105 aa15.82■□□□□ 0.12
UBE3B-201ENST00000340074 TCRBV5S1A1TA0A578 114 aa15.82■□□□□ 0.12
UBE3B-201ENST00000340074 H0Y858 1186 aa15.82■□□□□ 0.12
UBE3B-201ENST00000340074 LAMTOR5O43504 91 aa15.82■□□□□ 0.12
UBE3B-201ENST00000340074 SLC2A3P11169 496 aa15.82■□□□□ 0.12
UBE3B-201ENST00000340074 GZMAP12544 262 aa15.82■□□□□ 0.12
UBE3B-201ENST00000340074 GRIA2P42262 883 aa15.82■□□□□ 0.12
UBE3B-201ENST00000340074 ATXN1P54253 815 aaKnown RBP15.82■□□□□ 0.12
UBE3B-201ENST00000340074 SEC13P55735 322 aa15.82■□□□□ 0.12
UBE3B-201ENST00000340074 DEUP1Q05D60 604 aa15.82■□□□□ 0.12
UBE3B-201ENST00000340074 PPP2R5DQ14738 602 aa15.82■□□□□ 0.12
UBE3B-201ENST00000340074 PREPLQ4J6C6 727 aaPredicted RBP15.82■□□□□ 0.12
UBE3B-201ENST00000340074 PIK3R6Q5UE93 754 aa15.82■□□□□ 0.12
UBE3B-201ENST00000340074 GRAMD4Q6IC98 578 aa15.82■□□□□ 0.12
UBE3B-201ENST00000340074 PPP1R2P3Q6NXS1 205 aa15.82■□□□□ 0.12
UBE3B-201ENST00000340074 PKN3Q6P5Z2 889 aa15.82■□□□□ 0.12
UBE3B-201ENST00000340074 ATP6V0D2Q8N8Y2 350 aa15.82■□□□□ 0.12
UBE3B-201ENST00000340074 RXFP2Q8WXD0 754 aa15.82■□□□□ 0.12
UBE3B-201ENST00000340074 TMA16Q96EY4 203 aaKnown RBP15.82■□□□□ 0.12
UBE3B-201ENST00000340074 PGAP3Q96FM1 320 aaPredicted RBP15.82■□□□□ 0.12
UBE3B-201ENST00000340074 VCPIP1Q96JH7 1222 aa15.82■□□□□ 0.12
UBE3B-201ENST00000340074 DDX50Q9BQ39 737 aaKnown RBP15.82■□□□□ 0.12
UBE3B-201ENST00000340074 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.82■□□□□ 0.12
UBE3B-201ENST00000340074 ARHGAP20Q9P2F6 1191 aa15.82■□□□□ 0.12
UBE3B-201ENST00000340074 ADAMTS1Q9UHI8 967 aa15.82■□□□□ 0.12
UBE3B-201ENST00000340074 SLC12A6Q9UHW9 1150 aa15.82■□□□□ 0.12
UBE3B-201ENST00000340074 FBXO10Q9UK96 956 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms