RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 PUM3Q15397 648 aaKnown RBP12.95□□□□□ -0.34
BRPF3-201ENST00000339717 TRIP4Q15650 581 aaPredicted RBP12.95□□□□□ -0.34
BRPF3-201ENST00000339717 FAM91A1Q658Y4 838 aa12.95□□□□□ -0.34
BRPF3-201ENST00000339717 OGFOD2Q6N063 350 aa12.95□□□□□ -0.34
BRPF3-201ENST00000339717 NSMFQ6X4W1 530 aa12.95□□□□□ -0.34
BRPF3-201ENST00000339717 HAUS6Q7Z4H7 955 aa12.95□□□□□ -0.34
BRPF3-201ENST00000339717 HDHD2Q9H0R4 259 aa12.95□□□□□ -0.34
BRPF3-201ENST00000339717 TNKSO95271 1327 aa12.95□□□□□ -0.34
BRPF3-201ENST00000339717 HLA-DRAP01903 254 aa12.95□□□□□ -0.34
BRPF3-201ENST00000339717 TUBP50607 506 aa12.95□□□□□ -0.34
BRPF3-201ENST00000339717 PRKAA2P54646 552 aa12.95□□□□□ -0.34
BRPF3-201ENST00000339717 WDR72Q3MJ13 1102 aa12.95□□□□□ -0.34
BRPF3-201ENST00000339717 BHLHB9Q6PI77 547 aa12.95□□□□□ -0.34
BRPF3-201ENST00000339717 PPIL6Q8IXY8 311 aa12.95□□□□□ -0.34
BRPF3-201ENST00000339717 SETDB2Q96T68 719 aa12.95□□□□□ -0.34
BRPF3-201ENST00000339717 TEX12Q9BXU0 123 aa12.95□□□□□ -0.34
BRPF3-201ENST00000339717 CPNE5Q9HCH3 593 aa12.95□□□□□ -0.34
BRPF3-201ENST00000339717 A0A087X0T9 212 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 PTGES3LE9PB15 166 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 C6orf229H3BNL8 230 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 PCP11498 1178 aaKnown RBP12.94□□□□□ -0.34
BRPF3-201ENST00000339717 PRG2P13727 222 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 PPP2R2BQ00005 443 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 TGFBIQ15582 683 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 HES5Q5TA89 166 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 AMIGO1Q86WK6 493 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 AGPAT1Q99943 283 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 IFT22Q9H7X7 185 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 TCF7L2Q9NQB0 619 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 WDR70Q9NW82 654 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.94□□□□□ -0.34
BRPF3-201ENST00000339717 SNX9Q9Y5X1 595 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 TRIM38O00635 465 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 CCNT2O60583 730 aaKnown RBP12.94□□□□□ -0.34
BRPF3-201ENST00000339717 DHFRP00374 187 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 RPA3P35244 121 aaPredicted RBP12.94□□□□□ -0.34
BRPF3-201ENST00000339717 HTR2BP41595 481 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 GNA13Q14344 377 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 SEMA3AQ14563 771 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 UGP2Q16851 508 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 LRRC8DQ7L1W4 858 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 ADGRG6Q86SQ4 1221 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 SLFN12Q8IYM2 578 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 RCOR2Q8IZ40 523 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 C12orf50Q8NA57 414 aaPredicted RBP12.94□□□□□ -0.34
BRPF3-201ENST00000339717 BPIFB6Q8NFQ5 453 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 BORCS6Q96GS4 357 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 SLC39A1Q9NY26 324 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 RDH8Q9NYR8 311 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 PHF11Q9UIL8 331 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 VAV3Q9UKW4 847 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 SLC22A1O15245 554 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 KLK7P49862 253 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 PPIL2Q13356 520 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 SLC9A5Q14940 896 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 MROH9Q5TGP6 573 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 PMEPA1Q969W9 287 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 TOR3AQ9H497 397 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 CHORDC1Q9UHD1 332 aaPredicted RBP12.94□□□□□ -0.34
BRPF3-201ENST00000339717 NDUFB9Q9Y6M9 179 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 WRBO00258 174 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 CD19P15391 556 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 AMPD1P23109 780 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 PKLRP30613 574 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 PLEKHG6Q3KR16 790 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 DUPD1Q68J44 220 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 XKR5Q6UX68 686 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 C14orf80Q86SX3 495 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 SCFD2Q8WU76 684 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 NDUFAF4Q9P032 175 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.94□□□□□ -0.34
BRPF3-201ENST00000339717 KCNN3Q9UGI6 736 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 B3GNT3Q9Y2A9 372 aa12.94□□□□□ -0.34
BRPF3-201ENST00000339717 CPSF1Q10570 1443 aaKnown RBP12.93□□□□□ -0.34
BRPF3-201ENST00000339717 CSPG5O95196 566 aa12.93□□□□□ -0.34
BRPF3-201ENST00000339717 COMTP21964 271 aa12.93□□□□□ -0.34
BRPF3-201ENST00000339717 CNTFP26441 200 aa12.93□□□□□ -0.34
BRPF3-201ENST00000339717 ALDH1B1P30837 517 aa12.93□□□□□ -0.34
BRPF3-201ENST00000339717 RPL35P42766 123 aaKnown RBP12.93□□□□□ -0.34
BRPF3-201ENST00000339717 ACLYP53396 1101 aa12.93□□□□□ -0.34
BRPF3-201ENST00000339717 HSF2Q03933 536 aa12.93□□□□□ -0.34
BRPF3-201ENST00000339717 NFYCQ13952 458 aa12.93□□□□□ -0.34
BRPF3-201ENST00000339717 SSX2Q16385 188 aa12.93□□□□□ -0.34
BRPF3-201ENST00000339717 SEL1L3Q68CR1 1132 aa12.93□□□□□ -0.34
BRPF3-201ENST00000339717 SLC30A10Q6XR72 485 aa12.93□□□□□ -0.34
BRPF3-201ENST00000339717 KYAT3Q6YP21 454 aaKnown RBP12.93□□□□□ -0.34
BRPF3-201ENST00000339717 MAPKAPK5Q8IW41 473 aa12.93□□□□□ -0.34
BRPF3-201ENST00000339717 SLC9A6Q92581 669 aa12.93□□□□□ -0.34
BRPF3-201ENST00000339717 ZNF696Q9H7X3 374 aa12.93□□□□□ -0.34
BRPF3-201ENST00000339717 SLCO1B3Q9NPD5 702 aa12.93□□□□□ -0.34
BRPF3-201ENST00000339717 STOX2Q9P2F5 926 aaPredicted RBP12.93□□□□□ -0.34
BRPF3-201ENST00000339717 IP6K2Q9UHH9 426 aa12.93□□□□□ -0.34
BRPF3-201ENST00000339717 TARBP1Q13395 1621 aaKnown RBP12.93□□□□□ -0.34
BRPF3-201ENST00000339717 OR6C70A6NIJ9 312 aa12.93□□□□□ -0.34
BRPF3-201ENST00000339717 H7C0S8 307 aa12.93□□□□□ -0.34
BRPF3-201ENST00000339717 SERPINB7O75635 380 aa12.93□□□□□ -0.34
BRPF3-201ENST00000339717 SERPINE1P05121 402 aa12.93□□□□□ -0.34
BRPF3-201ENST00000339717 CLUP10909 449 aa12.93□□□□□ -0.34
BRPF3-201ENST00000339717 UCHL3P15374 230 aa12.93□□□□□ -0.34
BRPF3-201ENST00000339717 CENPAP49450 140 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms