RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 CCDC38Q502W7 563 aa23.19■■□□□ 1.3
PDLIM2-203ENST00000339162 C6orf118Q5T5N4 469 aa23.19■■□□□ 1.3
PDLIM2-203ENST00000339162 SCML4Q8N228 414 aa23.19■■□□□ 1.3
PDLIM2-203ENST00000339162 TLCD1Q96CP7 247 aa23.19■■□□□ 1.3
PDLIM2-203ENST00000339162 RTP4Q96DX8 246 aa23.19■■□□□ 1.3
PDLIM2-203ENST00000339162 PGM2Q96G03 612 aa23.19■■□□□ 1.3
PDLIM2-203ENST00000339162 TMEM109Q9BVC6 243 aa23.19■■□□□ 1.3
PDLIM2-203ENST00000339162 CRISPLD2Q9H0B8 497 aa23.19■■□□□ 1.3
PDLIM2-203ENST00000339162 OSER1Q9NX31 292 aa23.19■■□□□ 1.3
PDLIM2-203ENST00000339162 PAK5Q9P286 719 aa23.19■■□□□ 1.3
PDLIM2-203ENST00000339162 PCDHB5Q9Y5E4 795 aa23.19■■□□□ 1.3
PDLIM2-203ENST00000339162 A0A1W2PQH9 124 aa23.18■■□□□ 1.3
PDLIM2-203ENST00000339162 FOXO6A8MYZ6 492 aa23.18■■□□□ 1.3
PDLIM2-203ENST00000339162 HOXA2O43364 376 aa23.18■■□□□ 1.3
PDLIM2-203ENST00000339162 GNGT1P63211 74 aa23.18■■□□□ 1.3
PDLIM2-203ENST00000339162 SKOR1P84550 965 aa23.18■■□□□ 1.3
PDLIM2-203ENST00000339162 SCAPQ12770 1279 aa23.18■■□□□ 1.3
PDLIM2-203ENST00000339162 OLFM3Q96PB7 478 aa23.18■■□□□ 1.3
PDLIM2-203ENST00000339162 CFAP69A5D8W1 941 aa23.18■■□□□ 1.3
PDLIM2-203ENST00000339162 F5H423 210 aaPredicted RBP23.18■■□□□ 1.3
PDLIM2-203ENST00000339162 ALOX15BO15296 676 aa23.18■■□□□ 1.3
PDLIM2-203ENST00000339162 VAV1P15498 845 aa23.18■■□□□ 1.3
PDLIM2-203ENST00000339162 ERCC2P18074 760 aa23.18■■□□□ 1.3
PDLIM2-203ENST00000339162 TPI1P60174 286 aa23.18■■□□□ 1.3
PDLIM2-203ENST00000339162 SEMA3BQ13214 749 aa23.18■■□□□ 1.3
PDLIM2-203ENST00000339162 XRCC4Q13426 336 aa23.18■■□□□ 1.3
PDLIM2-203ENST00000339162 PRSS55Q6UWB4 352 aaPredicted RBP23.18■■□□□ 1.3
PDLIM2-203ENST00000339162 CASP10Q92851 521 aa23.18■■□□□ 1.3
PDLIM2-203ENST00000339162 QKIQ96PU8 341 aaKnown RBP eCLIP23.18■■□□□ 1.3
PDLIM2-203ENST00000339162 MRPL9Q9BYD2 267 aaKnown RBP23.18■■□□□ 1.3
PDLIM2-203ENST00000339162 CEP41Q9BYV8 373 aa23.18■■□□□ 1.3
PDLIM2-203ENST00000339162 CRISPLD1Q9H336 500 aa23.18■■□□□ 1.3
PDLIM2-203ENST00000339162 RABEP2Q9H5N1 569 aa23.18■■□□□ 1.3
PDLIM2-203ENST00000339162 ABCC13Q9NSE7 274 aa23.18■■□□□ 1.3
PDLIM2-203ENST00000339162 OR12D3Q9UGF7 316 aa23.18■■□□□ 1.3
PDLIM2-203ENST00000339162 AVILO75366 819 aa23.17■■□□□ 1.3
PDLIM2-203ENST00000339162 DGKIO75912 1065 aa23.17■■□□□ 1.3
PDLIM2-203ENST00000339162 ARL4CP56559 192 aa23.17■■□□□ 1.3
PDLIM2-203ENST00000339162 BBS9Q3SYG4 887 aa23.17■■□□□ 1.3
PDLIM2-203ENST00000339162 HEATR6Q6AI08 1181 aaKnown RBP23.17■■□□□ 1.3
PDLIM2-203ENST00000339162 TFB1MQ8WVM0 346 aaKnown RBP23.17■■□□□ 1.3
PDLIM2-203ENST00000339162 VWCEQ96DN2 955 aa23.17■■□□□ 1.3
PDLIM2-203ENST00000339162 FUBP3Q96I24 572 aaKnown RBP eCLIP23.17■■□□□ 1.3
PDLIM2-203ENST00000339162 TOX2Q96NM4 488 aa23.17■■□□□ 1.3
PDLIM2-203ENST00000339162 WDR83Q9BRX9 315 aaKnown RBP23.17■■□□□ 1.3
PDLIM2-203ENST00000339162 VPS37BQ9H9H4 285 aa23.17■■□□□ 1.3
PDLIM2-203ENST00000339162 TMEM39AQ9NV64 488 aa23.17■■□□□ 1.3
PDLIM2-203ENST00000339162 MRPL42Q9Y6G3 142 aaKnown RBP23.17■■□□□ 1.3
PDLIM2-203ENST00000339162 TANC1Q9C0D5 1861 aa23.17■■□□□ 1.3
PDLIM2-203ENST00000339162 NDC80O14777 642 aa23.17■■□□□ 1.3
PDLIM2-203ENST00000339162 METTL18O95568 372 aa23.17■■□□□ 1.3
PDLIM2-203ENST00000339162 AIF1P55008 147 aa23.17■■□□□ 1.3
PDLIM2-203ENST00000339162 AP1B1Q10567 949 aa23.17■■□□□ 1.3
PDLIM2-203ENST00000339162 KCNJ11Q14654 390 aa23.17■■□□□ 1.3
PDLIM2-203ENST00000339162 CEP128Q6ZU80 1094 aa23.17■■□□□ 1.3
PDLIM2-203ENST00000339162 NUP93Q8N1F7 819 aa23.17■■□□□ 1.3
PDLIM2-203ENST00000339162 CCNYQ8ND76 341 aa23.17■■□□□ 1.3
PDLIM2-203ENST00000339162 SIK2Q9H0K1 926 aa23.17■■□□□ 1.3
PDLIM2-203ENST00000339162 ETNK1Q9HBU6 452 aa23.17■■□□□ 1.3
PDLIM2-203ENST00000339162 TBK1Q9UHD2 729 aa23.17■■□□□ 1.3
PDLIM2-203ENST00000339162 DCLK1O15075 740 aa23.16■■□□□ 1.3
PDLIM2-203ENST00000339162 IRAK1P51617 712 aa23.16■■□□□ 1.3
PDLIM2-203ENST00000339162 PPP2R2AP63151 447 aa23.16■■□□□ 1.3
PDLIM2-203ENST00000339162 FAM117BQ6P1L5 589 aa23.16■■□□□ 1.3
PDLIM2-203ENST00000339162 VSTM1Q6UX27 236 aa23.16■■□□□ 1.3
PDLIM2-203ENST00000339162 RNF19BQ6ZMZ0 732 aa23.16■■□□□ 1.3
PDLIM2-203ENST00000339162 LRRC43Q8N309 656 aa23.16■■□□□ 1.3
PDLIM2-203ENST00000339162 HTR3CQ8WXA8 447 aa23.16■■□□□ 1.3
PDLIM2-203ENST00000339162 ROPN1BQ9BZX4 212 aaPredicted RBP23.16■■□□□ 1.3
PDLIM2-203ENST00000339162 ROPN1Q9HAT0 212 aaPredicted RBP23.16■■□□□ 1.3
PDLIM2-203ENST00000339162 TBX21Q9UL17 535 aa23.16■■□□□ 1.3
PDLIM2-203ENST00000339162 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.16■■□□□ 1.3
PDLIM2-203ENST00000339162 APRTP07741 180 aa23.16■■□□□ 1.3
PDLIM2-203ENST00000339162 ZNF333Q96JL9 665 aa23.16■■□□□ 1.3
PDLIM2-203ENST00000339162 SEPT5Q99719 369 aaPredicted RBP23.16■■□□□ 1.3
PDLIM2-203ENST00000339162 PRDM12Q9H4Q4 367 aa23.16■■□□□ 1.3
PDLIM2-203ENST00000339162 PATJQ8NI35 1801 aa23.16■■□□□ 1.3
PDLIM2-203ENST00000339162 OR6C75A6NL08 312 aa23.15■■□□□ 1.3
PDLIM2-203ENST00000339162 SHOX2O60902 331 aaPredicted RBP23.15■■□□□ 1.3
PDLIM2-203ENST00000339162 PIAS1O75925 651 aa23.15■■□□□ 1.3
PDLIM2-203ENST00000339162 LRIG2O94898 1065 aa23.15■■□□□ 1.3
PDLIM2-203ENST00000339162 IGLV3-25P01717 112 aa23.15■■□□□ 1.3
PDLIM2-203ENST00000339162 SRGAP2BP0DMP2 458 aa23.15■■□□□ 1.3
PDLIM2-203ENST00000339162 SSTR1P30872 391 aa23.15■■□□□ 1.3
PDLIM2-203ENST00000339162 IKBKEQ14164 716 aa23.15■■□□□ 1.3
PDLIM2-203ENST00000339162 MGAT5BQ3V5L5 792 aa23.15■■□□□ 1.3
PDLIM2-203ENST00000339162 EMC10Q5UCC4 262 aa23.15■■□□□ 1.3
PDLIM2-203ENST00000339162 PDIK1LQ8N165 341 aa23.15■■□□□ 1.3
PDLIM2-203ENST00000339162 NPWQ8N729 165 aa23.15■■□□□ 1.3
PDLIM2-203ENST00000339162 FBXO36Q8NEA4 188 aa23.15■■□□□ 1.3
PDLIM2-203ENST00000339162 PYROXD1Q8WU10 500 aa23.15■■□□□ 1.3
PDLIM2-203ENST00000339162 C8orf48Q96LL4 319 aa23.15■■□□□ 1.3
PDLIM2-203ENST00000339162 SEPT10Q9P0V9 454 aa23.15■■□□□ 1.3
PDLIM2-203ENST00000339162 FNDC1Q4ZHG4 1894 aaPredicted RBP23.15■■□□□ 1.3
PDLIM2-203ENST00000339162 MTMR11A4FU01 709 aa23.14■■□□□ 1.3
PDLIM2-203ENST00000339162 TRIM66O15016 1216 aa23.14■■□□□ 1.3
PDLIM2-203ENST00000339162 IRAK2O43187 625 aa23.14■■□□□ 1.3
PDLIM2-203ENST00000339162 VNN2O95498 520 aa23.14■■□□□ 1.3
PDLIM2-203ENST00000339162 EPHB2P29323 1055 aa23.14■■□□□ 1.3
PDLIM2-203ENST00000339162 ALDH7A1P49419 539 aaKnown RBP23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms