RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 PGBD4Q96DM1 585 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 P2RY11Q96G91 374 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 SMOQ99835 787 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 ACTR5Q9H9F9 607 aaPredicted RBP9.14□□□□□ -0.95
SNCA-201ENST00000336904 TMLHEQ9NVH6 421 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 ZNF358Q9NW07 568 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 FAM237BA0A1B0GVD1 139 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 ARL5CA6NH57 179 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 E7ESA3 106 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 EDF1O60869 148 aaKnown RBP9.14□□□□□ -0.95
SNCA-201ENST00000336904 RPSAP08865 295 aaKnown RBP9.14□□□□□ -0.95
SNCA-201ENST00000336904 HOXD8P13378 290 aaPredicted RBP9.14□□□□□ -0.95
SNCA-201ENST00000336904 MATKP42679 507 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 CPT1AP50416 773 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 GSCP56915 257 aaPredicted RBP9.14□□□□□ -0.95
SNCA-201ENST00000336904 PDK4Q16654 411 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 KLHL38Q2WGJ6 581 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 ACCSLQ4AC99 568 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 LACTB2Q53H82 288 aaPredicted RBP9.14□□□□□ -0.95
SNCA-201ENST00000336904 PPM1JQ5JR12 505 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 ZMIZ2Q8NF64 920 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 AGR3Q8TD06 166 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 HTR3CQ8WXA8 447 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 B3GALT6Q96L58 329 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 ZNF560Q96MR9 790 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 SRPK1Q96SB4 655 aaKnown RBP9.14□□□□□ -0.95
SNCA-201ENST00000336904 TRMT13Q9NUP7 481 aaKnown RBP9.14□□□□□ -0.95
SNCA-201ENST00000336904 FAM105AQ9NUU6 356 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 PRKAG3Q9UGI9 489 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 SLC24A2Q9UI40 661 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 EFR3BQ9Y2G0 817 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 ATXN2Q99700 1313 aaKnown RBP9.13□□□□□ -0.95
SNCA-201ENST00000336904 H0Y3Z8 333 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 ATP9BO43861 1147 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 MOCS2O96007 188 aaPredicted RBP9.13□□□□□ -0.95
SNCA-201ENST00000336904 CD4P01730 458 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 ATP2A2P16615 1042 aaKnown RBP9.13□□□□□ -0.95
SNCA-201ENST00000336904 RDXP35241 583 aaKnown RBP9.13□□□□□ -0.95
SNCA-201ENST00000336904 MRPS5P82675 430 aaKnown RBP9.13□□□□□ -0.95
SNCA-201ENST00000336904 DPYSL2Q16555 572 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 SV2CQ496J9 727 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 TIGD5Q53EQ6 642 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 FAM219BQ5XKK7 198 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 AGMOQ6ZNB7 445 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 ARHGAP36Q6ZRI8 547 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 PID1Q7Z2X4 250 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 RASAL3Q86YV0 1011 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 TFB1MQ8WVM0 346 aaKnown RBP9.13□□□□□ -0.95
SNCA-201ENST00000336904 SLC44A1Q8WWI5 657 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 TRIB2Q92519 343 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 RNF34Q969K3 372 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 SYT15Q9BQS2 421 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 ZNF670Q9BS34 389 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 DUSP16Q9BY84 665 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 IQCGQ9H095 443 aaKnown RBP9.13□□□□□ -0.95
SNCA-201ENST00000336904 MANSC1Q9H8J5 431 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 SYBUQ9NX95 663 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 KANSL3Q9P2N6 904 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 KIAA1257Q9ULG3 409 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.13□□□□□ -0.95
SNCA-201ENST00000336904 HMX2A2RU54 273 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 CFAP69A5D8W1 941 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 EEF2KO00418 725 aaKnown RBP9.13□□□□□ -0.95
SNCA-201ENST00000336904 DPYSL4O14531 572 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 COPEO14579 308 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 MDM4O15151 490 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 PRPF4O43172 522 aaKnown RBP eCLIP9.13□□□□□ -0.95
SNCA-201ENST00000336904 LYPLA1O75608 230 aaPredicted RBP9.13□□□□□ -0.95
SNCA-201ENST00000336904 TGM2P21980 687 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 CRYBB1P53674 252 aaPredicted RBP9.13□□□□□ -0.95
SNCA-201ENST00000336904 ACAP1Q15027 740 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 SNCBQ16143 134 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 ARHGAP17Q68EM7 881 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 RWDD4Q6NW29 188 aaKnown RBP9.13□□□□□ -0.95
SNCA-201ENST00000336904 CMC1Q7Z7K0 106 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 ALYREFQ86V81 257 aaKnown RBP9.13□□□□□ -0.95
SNCA-201ENST00000336904 NDUFAF2Q8N183 169 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 CRYBG2Q8N1P7 616 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 RIBC1Q8N443 379 aaPredicted RBP9.13□□□□□ -0.95
SNCA-201ENST00000336904 OR52K1Q8NGK4 314 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 FOXP3Q9BZS1 431 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 C20orf27Q9GZN8 174 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 GGA2Q9UJY4 613 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 FZD10Q9ULW2 581 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 DCAF8L1A6NGE4 600 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 CHADO15335 359 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 ATP6V1G2O95670 118 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 C1QAP02745 245 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 FAM200BP0CF97 657 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 NQO1P15559 274 aaKnown RBP9.13□□□□□ -0.95
SNCA-201ENST00000336904 EPHB2P29323 1055 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 KYAT1Q16773 422 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 NLRP9Q7RTR0 991 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 FAM35AQ86V20 835 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 UNC93AQ86WB7 457 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 TDRPQ86YL5 185 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 ZNF567Q8N184 647 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 GTF3C2Q8WUA4 911 aaPredicted RBP9.13□□□□□ -0.95
SNCA-201ENST00000336904 ATP2A3Q93084 1043 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 STAMBPL1Q96FJ0 436 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms