RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 TMEM30AQ9NV96 361 aa10.18□□□□□ -0.78
SYN3-201ENST00000332840 SPATA6Q9NWH7 488 aaPredicted RBP10.18□□□□□ -0.78
SYN3-201ENST00000332840 DUS2Q9NX74 493 aaKnown RBP10.18□□□□□ -0.78
SYN3-201ENST00000332840 GTSE1Q9NYZ3 720 aa10.18□□□□□ -0.78
SYN3-201ENST00000332840 TBC1D14Q9P2M4 693 aa10.18□□□□□ -0.78
SYN3-201ENST00000332840 CNOT8Q9UFF9 292 aaKnown RBP10.18□□□□□ -0.78
SYN3-201ENST00000332840 AMFRQ9UKV5 643 aa10.18□□□□□ -0.78
SYN3-201ENST00000332840 NDRG2Q9UN36 371 aaKnown RBP10.18□□□□□ -0.78
SYN3-201ENST00000332840 SCML2Q9UQR0 700 aa10.18□□□□□ -0.78
SYN3-201ENST00000332840 R4GN57 208 aa10.18□□□□□ -0.78
SYN3-201ENST00000332840 DYNC1I1O14576 645 aa10.17□□□□□ -0.78
SYN3-201ENST00000332840 KRT37O76014 449 aa10.17□□□□□ -0.78
SYN3-201ENST00000332840 FTCDO95954 541 aa10.17□□□□□ -0.78
SYN3-201ENST00000332840 CALB1P05937 261 aa10.17□□□□□ -0.78
SYN3-201ENST00000332840 SETSIPP0DME0 302 aa10.17□□□□□ -0.78
SYN3-201ENST00000332840 MBL2P11226 248 aaPredicted RBP10.17□□□□□ -0.78
SYN3-201ENST00000332840 CDH5P33151 784 aaPredicted RBP10.17□□□□□ -0.78
SYN3-201ENST00000332840 CCR3P51677 355 aa10.17□□□□□ -0.78
SYN3-201ENST00000332840 BCAT1P54687 386 aa10.17□□□□□ -0.78
SYN3-201ENST00000332840 GRSF1Q12849 480 aaKnown RBP eCLIP10.17□□□□□ -0.78
SYN3-201ENST00000332840 RPS6KA1Q15418 735 aa10.17□□□□□ -0.78
SYN3-201ENST00000332840 CNGA2Q16280 664 aa10.17□□□□□ -0.78
SYN3-201ENST00000332840 PPP1R26Q5T8A7 1209 aaPredicted RBP10.17□□□□□ -0.78
SYN3-201ENST00000332840 KLHDC10Q6PID8 442 aa10.17□□□□□ -0.78
SYN3-201ENST00000332840 MON1BQ7L1V2 547 aa10.17□□□□□ -0.78
SYN3-201ENST00000332840 PEX26Q7Z412 305 aa10.17□□□□□ -0.78
SYN3-201ENST00000332840 DAAM2Q86T65 1068 aa10.17□□□□□ -0.78
SYN3-201ENST00000332840 ANKRD52Q8NB46 1076 aa10.17□□□□□ -0.78
SYN3-201ENST00000332840 ZMIZ2Q8NF64 920 aa10.17□□□□□ -0.78
SYN3-201ENST00000332840 SCAMP5Q8TAC9 235 aa10.17□□□□□ -0.78
SYN3-201ENST00000332840 ZNF564Q8TBZ8 553 aaPredicted RBP10.17□□□□□ -0.78
SYN3-201ENST00000332840 CPA5Q8WXQ8 436 aa10.17□□□□□ -0.78
SYN3-201ENST00000332840 ZFYVE19Q96K21 471 aa10.17□□□□□ -0.78
SYN3-201ENST00000332840 SLC22A12Q96S37 553 aa10.17□□□□□ -0.78
SYN3-201ENST00000332840 CYP2S1Q96SQ9 504 aa10.17□□□□□ -0.78
SYN3-201ENST00000332840 OSBPL9Q96SU4 736 aa10.17□□□□□ -0.78
SYN3-201ENST00000332840 LHX5Q9H2C1 402 aa10.17□□□□□ -0.78
SYN3-201ENST00000332840 EBF3Q9H4W6 596 aa10.17□□□□□ -0.78
SYN3-201ENST00000332840 CYLDQ9NQC7 956 aa10.17□□□□□ -0.78
SYN3-201ENST00000332840 ADAM22Q9P0K1 906 aa10.17□□□□□ -0.78
SYN3-201ENST00000332840 RNF14Q9UBS8 474 aa10.17□□□□□ -0.78
SYN3-201ENST00000332840 CPQQ9Y646 472 aa10.17□□□□□ -0.78
SYN3-201ENST00000332840 E2F8A0AVK6 867 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 CTAGE15A4D2H0 777 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 EFCAB8A8MWE9 144 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 LEFTY2O00292 366 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 CES2O00748 559 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 COCHO43405 550 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 BUB1BO60566 1050 aaPredicted RBP10.16□□□□□ -0.78
SYN3-201ENST00000332840 TLR5O60602 858 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 ATG13O75143 517 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 ADH1CP00326 375 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 CTAGE8P0CG41 777 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 RALAP11233 206 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 DRD1P21728 446 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 PAFAH1B1P43034 410 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 TNK2Q07912 1038 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 BST2Q10589 180 aaKnown RBP10.16□□□□□ -0.78
SYN3-201ENST00000332840 FBXO43Q4G163 708 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 LCE2DQ5TA82 110 aaPredicted RBP10.16□□□□□ -0.78
SYN3-201ENST00000332840 C11orf63Q6NUN7 778 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 CTAGE6Q86UF2 777 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 NT5DC3Q86UY8 548 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 PASD1Q8IV76 773 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 CTAGE4Q8IX94 777 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 ZNF687Q8N1G0 1237 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 SPEM1Q8N4L4 309 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 ZNF276Q8N554 614 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 MSANTD4Q8NCY6 345 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 TTC16Q8NEE8 873 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 TFAP2BQ92481 460 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 PBKQ96KB5 322 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 ZSWIM1Q9BR11 485 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 NUP85Q9BW27 656 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 ECT2Q9H8V3 914 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 LMAN1LQ9HAT1 526 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 MRPL47Q9HD33 250 aaKnown RBP10.16□□□□□ -0.78
SYN3-201ENST00000332840 HPS4Q9NQG7 708 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 CLIC5Q9NZA1 410 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 GMIPQ9P107 970 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 LSM7Q9UK45 103 aaKnown RBP10.16□□□□□ -0.78
SYN3-201ENST00000332840 MTF2Q9Y483 593 aaPredicted RBP10.16□□□□□ -0.78
SYN3-201ENST00000332840 SCINQ9Y6U3 715 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 NOTCH4Q99466 2003 aa10.16□□□□□ -0.78
SYN3-201ENST00000332840 SHISA7A6NL88 538 aa10.15□□□□□ -0.78
SYN3-201ENST00000332840 MIF4GDA9UHW6 222 aaKnown RBP10.15□□□□□ -0.78
SYN3-201ENST00000332840 HHLA1C9JL84 531 aa10.15□□□□□ -0.78
SYN3-201ENST00000332840 TRDMT1O14717 391 aaKnown RBP10.15□□□□□ -0.78
SYN3-201ENST00000332840 XPO1O14980 1071 aaKnown RBP10.15□□□□□ -0.78
SYN3-201ENST00000332840 SRGAP2O75044 1071 aa10.15□□□□□ -0.78
SYN3-201ENST00000332840 BEST1O76090 585 aa10.15□□□□□ -0.78
SYN3-201ENST00000332840 CHRNB1P11230 501 aa10.15□□□□□ -0.78
SYN3-201ENST00000332840 ARSAP15289 507 aa10.15□□□□□ -0.78
SYN3-201ENST00000332840 MMP8P22894 467 aa10.15□□□□□ -0.78
SYN3-201ENST00000332840 ATP5C1P36542 298 aaKnown RBP10.15□□□□□ -0.78
SYN3-201ENST00000332840 SOX9P48436 509 aa10.15□□□□□ -0.78
SYN3-201ENST00000332840 NRLP54845 237 aa10.15□□□□□ -0.78
SYN3-201ENST00000332840 PTP4A2Q12974 167 aa10.15□□□□□ -0.78
SYN3-201ENST00000332840 CCINQ13939 588 aa10.15□□□□□ -0.78
SYN3-201ENST00000332840 EML3Q32P44 896 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms