RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 UPF3AQ9H1J1 476 aaKnown RBP17.97■□□□□ 0.47
DDX28-201ENST00000332395 AGO3Q9H9G7 860 aaKnown RBP17.97■□□□□ 0.47
DDX28-201ENST00000332395 SPC25Q9HBM1 224 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 SUFUQ9UMX1 484 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 A0A0A0MRY4 1105 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 CASTOR2A6NHX0 329 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 GPR182O15218 404 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 CREB3O43889 395 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 EDF1O60869 148 aaKnown RBP17.97■□□□□ 0.47
DDX28-201ENST00000332395 FYNP06241 537 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 ELF1P32519 619 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 DAOAP59103 153 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 MGAT5Q09328 741 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 GALNTL6Q49A17 601 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 ANKRD20A2Q5SQ80 823 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 ANKRD20A1Q5TYW2 823 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 ANKRD20A3Q5VUR7 823 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 CYB5D1Q6P9G0 228 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 DENND5BQ6ZUT9 1274 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 LRRC6Q86X45 466 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 CTAGE3PQ8IX95 158 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 PPM1NQ8N819 430 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 RNF169Q8NCN4 708 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 MAGEC3Q8TD91 643 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 SERAC1Q96JX3 654 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 SIGLEC10Q96LC7 697 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 SPATA13Q96N96 652 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 KCNK16Q96T55 309 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 PAAF1Q9BRP4 392 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 TMEM30AQ9NV96 361 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 YJEFN3A6XGL0 299 aa17.96■□□□□ 0.47
DDX28-201ENST00000332395 E7ENQ6 273 aa17.96■□□□□ 0.47
DDX28-201ENST00000332395 TRDMT1O14717 391 aaKnown RBP17.96■□□□□ 0.47
DDX28-201ENST00000332395 CAPN9O14815 690 aa17.96■□□□□ 0.47
DDX28-201ENST00000332395 APOEP02649 317 aa17.96■□□□□ 0.47
DDX28-201ENST00000332395 PRKCHP24723 683 aa17.96■□□□□ 0.47
DDX28-201ENST00000332395 UNC5AQ6ZN44 842 aa17.96■□□□□ 0.47
DDX28-201ENST00000332395 GPRIN1Q7Z2K8 1008 aa17.96■□□□□ 0.47
DDX28-201ENST00000332395 FITM2Q8N6M3 262 aa17.96■□□□□ 0.47
DDX28-201ENST00000332395 ZMIZ2Q8NF64 920 aa17.96■□□□□ 0.47
DDX28-201ENST00000332395 SLC7A14Q8TBB6 771 aa17.96■□□□□ 0.47
DDX28-201ENST00000332395 ZNF75CPQ92670 426 aaPredicted RBP17.96■□□□□ 0.47
DDX28-201ENST00000332395 ARHGAP39Q9C0H5 1083 aa17.96■□□□□ 0.47
DDX28-201ENST00000332395 RXFP1Q9HBX9 757 aa17.96■□□□□ 0.47
DDX28-201ENST00000332395 XAB2Q9HCS7 855 aaKnown RBP17.96■□□□□ 0.47
DDX28-201ENST00000332395 SLC17A7Q9P2U7 560 aa17.96■□□□□ 0.47
DDX28-201ENST00000332395 CDH9Q9ULB4 789 aa17.96■□□□□ 0.47
DDX28-201ENST00000332395 CXorf49A8MYA2 514 aaPredicted RBP17.96■□□□□ 0.46
DDX28-201ENST00000332395 LPXNO60711 386 aa17.96■□□□□ 0.46
DDX28-201ENST00000332395 FAM155BO75949 473 aa17.96■□□□□ 0.46
DDX28-201ENST00000332395 GSTA2P09210 222 aa17.96■□□□□ 0.46
DDX28-201ENST00000332395 RPL9P32969 192 aaKnown RBP17.96■□□□□ 0.46
DDX28-201ENST00000332395 GRIA1P42261 906 aa17.96■□□□□ 0.46
DDX28-201ENST00000332395 CACNA2D1P54289 1103 aa17.96■□□□□ 0.46
DDX28-201ENST00000332395 PRKD1Q15139 912 aaPredicted RBP17.96■□□□□ 0.46
DDX28-201ENST00000332395 UPP1Q16831 310 aa17.96■□□□□ 0.46
DDX28-201ENST00000332395 TTC39BQ5VTQ0 682 aaPredicted RBP17.96■□□□□ 0.46
DDX28-201ENST00000332395 ECHDC2Q86YB7 292 aa17.96■□□□□ 0.46
DDX28-201ENST00000332395 MPP5Q8N3R9 675 aa17.96■□□□□ 0.46
DDX28-201ENST00000332395 NETO2Q8NC67 525 aa17.96■□□□□ 0.46
DDX28-201ENST00000332395 EBNA1BP2Q99848 306 aaKnown RBP17.96■□□□□ 0.46
DDX28-201ENST00000332395 C12orf65Q9H3J6 166 aaKnown RBP17.96■□□□□ 0.46
DDX28-201ENST00000332395 CNGB3Q9NQW8 809 aa17.96■□□□□ 0.46
DDX28-201ENST00000332395 GABRQQ9UN88 632 aa17.96■□□□□ 0.46
DDX28-201ENST00000332395 MAD1L1Q9Y6D9 718 aa17.96■□□□□ 0.46
DDX28-201ENST00000332395 SF3B1O75533 1304 aaKnown RBP eCLIP17.95■□□□□ 0.46
DDX28-201ENST00000332395 ZNF638Q14966 1978 aaKnown RBP17.95■□□□□ 0.46
DDX28-201ENST00000332395 EEF2KO00418 725 aaKnown RBP17.95■□□□□ 0.46
DDX28-201ENST00000332395 FDFT1P37268 417 aa17.95■□□□□ 0.46
DDX28-201ENST00000332395 SLC18A2Q05940 514 aa17.95■□□□□ 0.46
DDX28-201ENST00000332395 AP1B1Q10567 949 aa17.95■□□□□ 0.46
DDX28-201ENST00000332395 SREBF2Q12772 1141 aa17.95■□□□□ 0.46
DDX28-201ENST00000332395 DPYSQ14117 519 aa17.95■□□□□ 0.46
DDX28-201ENST00000332395 RAB41Q5JT25 222 aa17.95■□□□□ 0.46
DDX28-201ENST00000332395 SH2D5Q6ZV89 423 aa17.95■□□□□ 0.46
DDX28-201ENST00000332395 MRPL10Q7Z7H8 261 aaKnown RBP17.95■□□□□ 0.46
DDX28-201ENST00000332395 ADAM32Q8TC27 787 aa17.95■□□□□ 0.46
DDX28-201ENST00000332395 APOPT1Q96IL0 206 aa17.95■□□□□ 0.46
DDX28-201ENST00000332395 SLC9A7Q96T83 725 aa17.95■□□□□ 0.46
DDX28-201ENST00000332395 ZNF180Q9UJW8 692 aa17.95■□□□□ 0.46
DDX28-201ENST00000332395 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.95■□□□□ 0.46
DDX28-201ENST00000332395 PTCH2Q9Y6C5 1203 aa17.95■□□□□ 0.46
DDX28-201ENST00000332395 RNF103O00237 685 aa17.94■□□□□ 0.46
DDX28-201ENST00000332395 USP17L7P0C7H9 530 aa17.94■□□□□ 0.46
DDX28-201ENST00000332395 PYGBP11216 843 aa17.94■□□□□ 0.46
DDX28-201ENST00000332395 ADRA1BP35368 520 aa17.94■□□□□ 0.46
DDX28-201ENST00000332395 THPOP40225 353 aa17.94■□□□□ 0.46
DDX28-201ENST00000332395 FCGRTP55899 365 aa17.94■□□□□ 0.46
DDX28-201ENST00000332395 PAFAH1B3Q15102 231 aaKnown RBP17.94■□□□□ 0.46
DDX28-201ENST00000332395 PDK1Q15118 436 aa17.94■□□□□ 0.46
DDX28-201ENST00000332395 TIGD5Q53EQ6 642 aa17.94■□□□□ 0.46
DDX28-201ENST00000332395 RFX8Q6ZV50 586 aa17.94■□□□□ 0.46
DDX28-201ENST00000332395 PAXIP1Q6ZW49 1069 aaPredicted RBP17.94■□□□□ 0.46
DDX28-201ENST00000332395 ZNF276Q8N554 614 aa17.94■□□□□ 0.46
DDX28-201ENST00000332395 GSDMBQ8TAX9 411 aa17.94■□□□□ 0.46
DDX28-201ENST00000332395 THOC1Q96FV9 657 aaKnown RBP17.94■□□□□ 0.46
DDX28-201ENST00000332395 P2RY11Q96G91 374 aa17.94■□□□□ 0.46
DDX28-201ENST00000332395 TRIM56Q9BRZ2 755 aaKnown RBP17.94■□□□□ 0.46
DDX28-201ENST00000332395 WDR6Q9NNW5 1121 aaKnown RBP17.94■□□□□ 0.46
DDX28-201ENST00000332395 SMYD2Q9NRG4 433 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms