RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 TOP3BO95985 862 aaKnown RBP15.85■□□□□ 0.13
BRCC3-201ENST00000330045 SKIP12755 728 aa15.85■□□□□ 0.13
BRCC3-201ENST00000330045 AMPD1P23109 780 aa15.85■□□□□ 0.13
BRCC3-201ENST00000330045 ADORA2AP29274 412 aa15.85■□□□□ 0.13
BRCC3-201ENST00000330045 ATXN1P54253 815 aaKnown RBP15.85■□□□□ 0.13
BRCC3-201ENST00000330045 ALDH18A1P54886 795 aaKnown RBP15.85■□□□□ 0.13
BRCC3-201ENST00000330045 SARNPP82979 210 aaKnown RBP15.85■□□□□ 0.13
BRCC3-201ENST00000330045 AP1B1Q10567 949 aa15.85■□□□□ 0.13
BRCC3-201ENST00000330045 SEMA5AQ13591 1074 aa15.85■□□□□ 0.13
BRCC3-201ENST00000330045 NBPF20Q3BBV1 942 aa15.85■□□□□ 0.13
BRCC3-201ENST00000330045 IRGCQ6NXR0 463 aa15.85■□□□□ 0.13
BRCC3-201ENST00000330045 RFX8Q6ZV50 586 aa15.85■□□□□ 0.13
BRCC3-201ENST00000330045 CYS1Q717R9 158 aa15.85■□□□□ 0.13
BRCC3-201ENST00000330045 SCUBE1Q8IWY4 988 aa15.85■□□□□ 0.13
BRCC3-201ENST00000330045 PPFIBP2Q8ND30 876 aa15.85■□□□□ 0.13
BRCC3-201ENST00000330045 GPRC5AQ8NFJ5 357 aa15.85■□□□□ 0.13
BRCC3-201ENST00000330045 NLRP7Q8WX94 980 aa15.85■□□□□ 0.13
BRCC3-201ENST00000330045 QKIQ96PU8 341 aaKnown RBP eCLIP15.85■□□□□ 0.13
BRCC3-201ENST00000330045 CCDC106Q9BWC9 280 aa15.85■□□□□ 0.13
BRCC3-201ENST00000330045 MAGEB5Q9BZ81 275 aa15.85■□□□□ 0.13
BRCC3-201ENST00000330045 SLC24A3Q9HC58 644 aa15.85■□□□□ 0.13
BRCC3-201ENST00000330045 AP4E1Q9UPM8 1137 aa15.85■□□□□ 0.13
BRCC3-201ENST00000330045 F8W8V4 182 aa15.85■□□□□ 0.13
BRCC3-201ENST00000330045 TSPAN1O60635 241 aa15.85■□□□□ 0.13
BRCC3-201ENST00000330045 SERPINA6P08185 405 aa15.85■□□□□ 0.13
BRCC3-201ENST00000330045 PTPN9P43378 593 aa15.85■□□□□ 0.13
BRCC3-201ENST00000330045 IRX4P78413 519 aa15.85■□□□□ 0.13
BRCC3-201ENST00000330045 WASHC5Q12768 1159 aa15.85■□□□□ 0.13
BRCC3-201ENST00000330045 TBCCQ15814 346 aa15.85■□□□□ 0.13
BRCC3-201ENST00000330045 KYAT3Q6YP21 454 aaKnown RBP15.85■□□□□ 0.13
BRCC3-201ENST00000330045 PPP1R14CQ8TAE6 165 aa15.85■□□□□ 0.13
BRCC3-201ENST00000330045 PLA2G4CQ9UP65 541 aa15.85■□□□□ 0.13
BRCC3-201ENST00000330045 PLXNA1Q9UIW2 1896 aa15.84■□□□□ 0.13
BRCC3-201ENST00000330045 CITO14578 2027 aa15.84■□□□□ 0.13
BRCC3-201ENST00000330045 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.84■□□□□ 0.13
BRCC3-201ENST00000330045 TM7SF2O76062 418 aa15.84■□□□□ 0.13
BRCC3-201ENST00000330045 UPP2O95045 317 aa15.84■□□□□ 0.13
BRCC3-201ENST00000330045 LGALS2P05162 132 aa15.84■□□□□ 0.13
BRCC3-201ENST00000330045 LBRQ14739 615 aaKnown RBP15.84■□□□□ 0.13
BRCC3-201ENST00000330045 DNAL1Q4LDG9 190 aa15.84■□□□□ 0.13
BRCC3-201ENST00000330045 SPRYD7Q5W111 196 aa15.84■□□□□ 0.13
BRCC3-201ENST00000330045 TMEM154Q6P9G4 183 aa15.84■□□□□ 0.13
BRCC3-201ENST00000330045 NET1Q7Z628 596 aaPredicted RBP15.84■□□□□ 0.13
BRCC3-201ENST00000330045 CLEC4CQ8WTT0 213 aa15.84■□□□□ 0.13
BRCC3-201ENST00000330045 CSPG4P5Q96PW8 444 aa15.84■□□□□ 0.13
BRCC3-201ENST00000330045 EBF4Q9BQW3 602 aa15.84■□□□□ 0.13
BRCC3-201ENST00000330045 MROH8Q9H579 483 aa15.84■□□□□ 0.13
BRCC3-201ENST00000330045 MTMR10Q9NXD2 777 aa15.84■□□□□ 0.13
BRCC3-201ENST00000330045 NME7Q9Y5B8 376 aa15.84■□□□□ 0.13
BRCC3-201ENST00000330045 WDR27A2RRH5 827 aa15.84■□□□□ 0.13
BRCC3-201ENST00000330045 DCAF8L1A6NGE4 600 aa15.84■□□□□ 0.13
BRCC3-201ENST00000330045 PRR5-ARHGAP8B1AHC4 643 aa15.84■□□□□ 0.13
BRCC3-201ENST00000330045 CCNHP51946 323 aaPredicted RBP15.84■□□□□ 0.13
BRCC3-201ENST00000330045 ARHGAP8P85298 464 aa15.84■□□□□ 0.13
BRCC3-201ENST00000330045 FASTKD1Q53R41 847 aaKnown RBP15.84■□□□□ 0.13
BRCC3-201ENST00000330045 STXBP5Q5T5C0 1151 aa15.84■□□□□ 0.13
BRCC3-201ENST00000330045 C6orf163Q5TEZ5 329 aa15.84■□□□□ 0.13
BRCC3-201ENST00000330045 CASC4Q6P4E1 433 aa15.84■□□□□ 0.13
BRCC3-201ENST00000330045 DENND5BQ6ZUT9 1274 aa15.84■□□□□ 0.13
BRCC3-201ENST00000330045 ARMCX2Q7L311 632 aa15.84■□□□□ 0.13
BRCC3-201ENST00000330045 WDR75Q8IWA0 830 aaKnown RBP15.84■□□□□ 0.13
BRCC3-201ENST00000330045 CENPIQ92674 756 aaPredicted RBP15.84■□□□□ 0.13
BRCC3-201ENST00000330045 KCTD15Q96SI1 283 aaPredicted RBP15.84■□□□□ 0.13
BRCC3-201ENST00000330045 SYT15Q9BQS2 421 aa15.84■□□□□ 0.13
BRCC3-201ENST00000330045 THTPAQ9BU02 230 aa15.84■□□□□ 0.13
BRCC3-201ENST00000330045 C11orf84Q9BUA3 381 aaPredicted RBP15.84■□□□□ 0.13
BRCC3-201ENST00000330045 DTLQ9NZJ0 730 aa15.84■□□□□ 0.13
BRCC3-201ENST00000330045 PPEF2O14830 753 aa15.83■□□□□ 0.12
BRCC3-201ENST00000330045 MAP3K7O43318 606 aa15.83■□□□□ 0.12
BRCC3-201ENST00000330045 CIB2O75838 187 aa15.83■□□□□ 0.12
BRCC3-201ENST00000330045 ALDH1A2O94788 518 aa15.83■□□□□ 0.12
BRCC3-201ENST00000330045 GTF2A2P52657 109 aa15.83■□□□□ 0.12
BRCC3-201ENST00000330045 ARHGAP1Q07960 439 aa15.83■□□□□ 0.12
BRCC3-201ENST00000330045 GRIK3Q13003 919 aa15.83■□□□□ 0.12
BRCC3-201ENST00000330045 DBN1Q16643 649 aa15.83■□□□□ 0.12
BRCC3-201ENST00000330045 STEAP4Q687X5 459 aa15.83■□□□□ 0.12
BRCC3-201ENST00000330045 NCBP2-AS2Q69YL0 99 aa15.83■□□□□ 0.12
BRCC3-201ENST00000330045 ULK2Q8IYT8 1036 aa15.83■□□□□ 0.12
BRCC3-201ENST00000330045 UNC5BQ8IZJ1 945 aa15.83■□□□□ 0.12
BRCC3-201ENST00000330045 C7orf31Q8N865 590 aa15.83■□□□□ 0.12
BRCC3-201ENST00000330045 OR6B3Q8NGW1 331 aa15.83■□□□□ 0.12
BRCC3-201ENST00000330045 HTR3CQ8WXA8 447 aa15.83■□□□□ 0.12
BRCC3-201ENST00000330045 YIPF3Q9GZM5 350 aa15.83■□□□□ 0.12
BRCC3-201ENST00000330045 MORF4L1Q9UBU8 362 aa15.83■□□□□ 0.12
BRCC3-201ENST00000330045 NR2E3Q9Y5X4 410 aa15.83■□□□□ 0.12
BRCC3-201ENST00000330045 WASF2Q9Y6W5 498 aa15.83■□□□□ 0.12
BRCC3-201ENST00000330045 TRIP11Q15643 1979 aa15.83■□□□□ 0.12
BRCC3-201ENST00000330045 SDR42E2A6NKP2 422 aa15.83■□□□□ 0.12
BRCC3-201ENST00000330045 GSRP00390 522 aa15.83■□□□□ 0.12
BRCC3-201ENST00000330045 GRM5P41594 1212 aa15.83■□□□□ 0.12
BRCC3-201ENST00000330045 MXRA7P84157 204 aa15.83■□□□□ 0.12
BRCC3-201ENST00000330045 TRMT5Q32P41 509 aaKnown RBP15.83■□□□□ 0.12
BRCC3-201ENST00000330045 C16orf46Q6P387 395 aa15.83■□□□□ 0.12
BRCC3-201ENST00000330045 MARK2Q7KZI7 788 aaKnown RBP15.83■□□□□ 0.12
BRCC3-201ENST00000330045 SLC26A9Q7LBE3 791 aa15.83■□□□□ 0.12
BRCC3-201ENST00000330045 C2orf69Q8N8R5 385 aa15.83■□□□□ 0.12
BRCC3-201ENST00000330045 ACMSDQ8TDX5 336 aa15.83■□□□□ 0.12
BRCC3-201ENST00000330045 TFB1MQ8WVM0 346 aaKnown RBP15.83■□□□□ 0.12
BRCC3-201ENST00000330045 CLPTM1LQ96KA5 538 aa15.83■□□□□ 0.12
BRCC3-201ENST00000330045 LPIN3Q9BQK8 851 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms