RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 CDK5RAP2Q96SN8 1893 aa12.2□□□□□ -0.46
SHMT2-201ENST00000328923 DDX60LQ5H9U9 1706 aaKnown RBP12.2□□□□□ -0.46
SHMT2-201ENST00000328923 GOLGA8QA0A0J9YX86 632 aa12.2□□□□□ -0.46
SHMT2-201ENST00000328923 GOLGA8OA6NCC3 632 aa12.2□□□□□ -0.46
SHMT2-201ENST00000328923 GOLGA8NF8WBI6 632 aa12.2□□□□□ -0.46
SHMT2-201ENST00000328923 C6orf229H3BNL8 230 aa12.2□□□□□ -0.46
SHMT2-201ENST00000328923 SPOPO43791 374 aa12.2□□□□□ -0.46
SHMT2-201ENST00000328923 BMP10O95393 424 aa12.2□□□□□ -0.46
SHMT2-201ENST00000328923 KRT18P05783 430 aaKnown RBP12.2□□□□□ -0.46
SHMT2-201ENST00000328923 ZNF182P17025 639 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-201ENST00000328923 TNFAIP3P21580 790 aa12.2□□□□□ -0.46
SHMT2-201ENST00000328923 CLK2P49760 499 aaKnown RBP12.2□□□□□ -0.46
SHMT2-201ENST00000328923 ESRRGP62508 458 aa12.2□□□□□ -0.46
SHMT2-201ENST00000328923 TRAF2Q12933 501 aa12.2□□□□□ -0.46
SHMT2-201ENST00000328923 PTK2BQ14289 1009 aa12.2□□□□□ -0.46
SHMT2-201ENST00000328923 PRKD1Q15139 912 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-201ENST00000328923 GJB7Q6PEY0 223 aa12.2□□□□□ -0.46
SHMT2-201ENST00000328923 RNF207Q6ZRF8 634 aa12.2□□□□□ -0.46
SHMT2-201ENST00000328923 OTOP3Q7RTS5 596 aa12.2□□□□□ -0.46
SHMT2-201ENST00000328923 TICAM1Q8IUC6 712 aa12.2□□□□□ -0.46
SHMT2-201ENST00000328923 ANGPTL6Q8NI99 470 aa12.2□□□□□ -0.46
SHMT2-201ENST00000328923 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-201ENST00000328923 CD101Q93033 1021 aa12.2□□□□□ -0.46
SHMT2-201ENST00000328923 VTI1AQ96AJ9 217 aa12.2□□□□□ -0.46
SHMT2-201ENST00000328923 TMA16Q96EY4 203 aaKnown RBP12.2□□□□□ -0.46
SHMT2-201ENST00000328923 LRGUKQ96M69 825 aa12.2□□□□□ -0.46
SHMT2-201ENST00000328923 AIFM2Q9BRQ8 373 aa12.2□□□□□ -0.46
SHMT2-201ENST00000328923 GCOM2Q9BZD3 368 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-201ENST00000328923 MOV10Q9HCE1 1003 aaKnown RBP12.2□□□□□ -0.46
SHMT2-201ENST00000328923 UCKL1Q9NWZ5 548 aa12.2□□□□□ -0.46
SHMT2-201ENST00000328923 ASTN1O14525 1302 aa12.2□□□□□ -0.46
SHMT2-201ENST00000328923 ZNF701M0R085 212 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-201ENST00000328923 C8BP07358 591 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 POLR2CP19387 275 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-201ENST00000328923 EIF3EP60228 445 aaKnown RBP12.19□□□□□ -0.46
SHMT2-201ENST00000328923 B2MP61769 119 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 PRKCEQ02156 737 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 NME3Q13232 169 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 DRAP1Q14919 205 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-201ENST00000328923 PGM2L1Q6PCE3 622 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 TMEM26Q6ZUK4 368 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 FRA10AC1Q70Z53 315 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 NOP9Q86U38 636 aaKnown RBP12.19□□□□□ -0.46
SHMT2-201ENST00000328923 PSD4Q8NDX1 1056 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 NEDD1Q8NHV4 660 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 KBTBD7Q8WVZ9 684 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 GLMNQ92990 594 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 ZUFSPQ96AP4 578 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 VMP1Q96GC9 406 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 CDK5RAP1Q96SZ6 601 aaKnown RBP12.19□□□□□ -0.46
SHMT2-201ENST00000328923 TRIM56Q9BRZ2 755 aaKnown RBP12.19□□□□□ -0.46
SHMT2-201ENST00000328923 GPR88Q9GZN0 384 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 CPVLQ9H3G5 476 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 NOL6Q9H6R4 1146 aaKnown RBP12.19□□□□□ -0.46
SHMT2-201ENST00000328923 DNAJC18Q9H819 358 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 SENP1Q9P0U3 644 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 MYRFQ9Y2G1 1151 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 PCP4L1A6NKN8 68 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 ABHD2P08910 425 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 CCDC159P0C7I6 412 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 IDUAP35475 653 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 HPCAL1P37235 193 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 MAPK10P53779 464 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 MLLT10P55197 1068 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 GBE1Q04446 702 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 TFDP1Q14186 410 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 DGKDQ16760 1214 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 BBS9Q3SYG4 887 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 MFSD14BQ5SR56 506 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 LDLRAP1Q5SW96 308 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 ZFYVE27Q5T4F4 411 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 SLFN13Q68D06 897 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 SPARTQ8N0X7 666 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 SLC16A10Q8TF71 515 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 UQCC2Q9BRT2 126 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 GDAP2Q9NXN4 497 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 DNAJC12Q9UKB3 198 aa12.19□□□□□ -0.46
SHMT2-201ENST00000328923 SORBS3O60504 671 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 PROCP04070 461 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 RRM1P23921 792 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 HADHAP40939 763 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 DLG4P78352 724 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 GALNT2Q10471 571 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 PTK6Q13882 451 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 ADGRE1Q14246 886 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 COL19A1Q14993 1142 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 USP17L2Q6R6M4 530 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 ZC3H7AQ8IWR0 971 aaKnown RBP12.18□□□□□ -0.46
SHMT2-201ENST00000328923 TGFBRAP1Q8WUH2 860 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 ATG4AQ8WYN0 398 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 SDCCAG3Q96C92 435 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 RMND5BQ96G75 393 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-201ENST00000328923 FRMD8Q9BZ67 464 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-201ENST00000328923 CLPBQ9H078 707 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 VPS11Q9H270 941 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 COPS7BQ9H9Q2 264 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-201ENST00000328923 CXorf21Q9HAI6 301 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 NEK6Q9HC98 313 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 SCUBE2Q9NQ36 999 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 OLAHQ9NV23 265 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms