RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 KCNA10Q16322 511 aa11.33□□□□□ -0.6
TOP3A-201ENST00000321105 PDCD2Q16342 344 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-201ENST00000321105 DDIASQ8IXT1 998 aa11.33□□□□□ -0.6
TOP3A-201ENST00000321105 CYP4X1Q8N118 509 aa11.33□□□□□ -0.6
TOP3A-201ENST00000321105 CCDC185Q8N715 623 aa11.33□□□□□ -0.6
TOP3A-201ENST00000321105 PCSK9Q8NBP7 692 aaKnown RBP11.33□□□□□ -0.6
TOP3A-201ENST00000321105 SLC26A7Q8TE54 656 aa11.33□□□□□ -0.6
TOP3A-201ENST00000321105 ASIC4Q96FT7 647 aa11.33□□□□□ -0.6
TOP3A-201ENST00000321105 PGM2Q96G03 612 aa11.33□□□□□ -0.6
TOP3A-201ENST00000321105 XAB2Q9HCS7 855 aaKnown RBP11.33□□□□□ -0.6
TOP3A-201ENST00000321105 ARHGEF38Q9NXL2 777 aa11.33□□□□□ -0.6
TOP3A-201ENST00000321105 LTBP4Q8N2S1 1624 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 E5RI56 91 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 GMNNO75496 209 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 CKMP06732 381 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 PGM1P36871 562 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 PTGIRP43119 386 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 PRKCZQ05513 592 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 ITGA9Q13797 1035 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 UBAP2Q5T6F2 1119 aaKnown RBP11.32□□□□□ -0.6
TOP3A-201ENST00000321105 ZDHHC24Q6UX98 284 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 TTC30BQ8N4P2 665 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 POU5F2Q8N7G0 328 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 WNT8BQ93098 351 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 MYLPFQ96A32 169 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 ZMAT2Q96NC0 199 aaKnown RBP11.32□□□□□ -0.6
TOP3A-201ENST00000321105 HERPUD2Q9BSE4 406 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 ETNK2Q9NVF9 386 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 ADA2Q9NZK5 511 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 C2orf71A6NGG8 1288 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 HNRNPH1P31943 449 aaKnown RBP11.32□□□□□ -0.6
TOP3A-201ENST00000321105 SPRP35270 261 aaPredicted RBP11.32□□□□□ -0.6
TOP3A-201ENST00000321105 AQP5P55064 265 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 NME5P56597 212 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 IFNEQ86WN2 208 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 DDX1Q92499 740 aaKnown RBP11.32□□□□□ -0.6
TOP3A-201ENST00000321105 SRPK1Q96SB4 655 aaKnown RBP11.32□□□□□ -0.6
TOP3A-201ENST00000321105 FOXP3Q9BZS1 431 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 L3MBTL1Q9Y468 752 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 SPATA31D3P0C874 917 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 GRIA1P42261 906 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 SP3Q02447 781 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 SOWAHAQ2M3V2 549 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 ANKRD20A2Q5SQ80 823 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 FNBP1LQ5T0N5 605 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 ANKRD20A1Q5TYW2 823 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 SPATA31D4Q6ZUB0 917 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 TTC30AQ86WT1 665 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 SOCS4Q8WXH5 440 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 SMARCD1Q96GM5 515 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 ZBED3Q96IU2 234 aaPredicted RBP11.32□□□□□ -0.6
TOP3A-201ENST00000321105 IL1RL2Q9HB29 575 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 DMAP1Q9NPF5 467 aaPredicted RBP11.32□□□□□ -0.6
TOP3A-201ENST00000321105 PACSIN3Q9UKS6 424 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 SCN9AQ15858 1988 aa11.32□□□□□ -0.6
TOP3A-201ENST00000321105 TCRBV7S3A2A0A539 114 aa11.31□□□□□ -0.6
TOP3A-201ENST00000321105 FGFR1P11362 822 aa11.31□□□□□ -0.6
TOP3A-201ENST00000321105 ENO3P13929 434 aaPredicted RBP11.31□□□□□ -0.6
TOP3A-201ENST00000321105 GPD2P43304 727 aa11.31□□□□□ -0.6
TOP3A-201ENST00000321105 STX1BP61266 288 aa11.31□□□□□ -0.6
TOP3A-201ENST00000321105 CHADLQ6NUI6 762 aa11.31□□□□□ -0.6
TOP3A-201ENST00000321105 LCLAT1Q6UWP7 414 aa11.31□□□□□ -0.6
TOP3A-201ENST00000321105 B3GNT9Q6UX72 402 aa11.31□□□□□ -0.6
TOP3A-201ENST00000321105 TNS4Q8IZW8 715 aa11.31□□□□□ -0.6
TOP3A-201ENST00000321105 MREGQ8N565 214 aa11.31□□□□□ -0.6
TOP3A-201ENST00000321105 PLD5Q8N7P1 536 aa11.31□□□□□ -0.6
TOP3A-201ENST00000321105 PPHLN1Q8NEY8 458 aaKnown RBP11.31□□□□□ -0.6
TOP3A-201ENST00000321105 SCAMP5Q8TAC9 235 aa11.31□□□□□ -0.6
TOP3A-201ENST00000321105 N4BP2L2Q92802 583 aaPredicted RBP11.31□□□□□ -0.6
TOP3A-201ENST00000321105 PHF21BQ96EK2 531 aa11.31□□□□□ -0.6
TOP3A-201ENST00000321105 CATSPERBQ9H7T0 1116 aa11.31□□□□□ -0.6
TOP3A-201ENST00000321105 TCRBV9S1A1TA0A576 114 aa11.31□□□□□ -0.6
TOP3A-201ENST00000321105 E9PBE3 544 aa11.31□□□□□ -0.6
TOP3A-201ENST00000321105 CHUKO15111 745 aa11.31□□□□□ -0.6
TOP3A-201ENST00000321105 KLHL41O60662 606 aa11.31□□□□□ -0.6
TOP3A-201ENST00000321105 CCR1P32246 355 aa11.31□□□□□ -0.6
TOP3A-201ENST00000321105 CRYBB1P53674 252 aaPredicted RBP11.31□□□□□ -0.6
TOP3A-201ENST00000321105 RAB44Q7Z6P3 723 aaPredicted RBP11.31□□□□□ -0.6
TOP3A-201ENST00000321105 PRPF39Q86UA1 669 aaKnown RBP11.31□□□□□ -0.6
TOP3A-201ENST00000321105 TRPV6Q9H1D0 765 aa11.31□□□□□ -0.6
TOP3A-201ENST00000321105 SLC17A7Q9P2U7 560 aa11.31□□□□□ -0.6
TOP3A-201ENST00000321105 GRID1Q9ULK0 1009 aa11.31□□□□□ -0.6
TOP3A-201ENST00000321105 TFE3P19532 575 aaPredicted RBP11.31□□□□□ -0.6
TOP3A-201ENST00000321105 NOS2P35228 1153 aa11.31□□□□□ -0.6
TOP3A-201ENST00000321105 GJA5P36382 358 aa11.31□□□□□ -0.6
TOP3A-201ENST00000321105 PAPOLAP51003 745 aaKnown RBP11.31□□□□□ -0.6
TOP3A-201ENST00000321105 IL1RL1Q01638 556 aa11.31□□□□□ -0.6
TOP3A-201ENST00000321105 RABGAP1LQ5R372 815 aa11.31□□□□□ -0.6
TOP3A-201ENST00000321105 SYPL2Q5VXT5 272 aa11.31□□□□□ -0.6
TOP3A-201ENST00000321105 RNF148Q8N7C7 305 aa11.31□□□□□ -0.6
TOP3A-201ENST00000321105 TMA16Q96EY4 203 aaKnown RBP11.31□□□□□ -0.6
TOP3A-201ENST00000321105 KLHL5Q96PQ7 755 aa11.31□□□□□ -0.6
TOP3A-201ENST00000321105 SLC17A6Q9P2U8 582 aa11.31□□□□□ -0.6
TOP3A-201ENST00000321105 YJEFN3A6XGL0 299 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 C9IYK1 514 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 E7ENQ6 273 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 GRK4P32298 578 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 HARS2P49590 506 aaKnown RBP11.3□□□□□ -0.6
TOP3A-201ENST00000321105 DRG2P55039 364 aaKnown RBP11.3□□□□□ -0.6
TOP3A-201ENST00000321105 GJA9P57773 515 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms