RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 ACLYP53396 1101 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 CYP4F8P98187 520 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 CYP4Z2PQ8N1L4 340 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 FNDC5Q8NAU1 212 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 TBC1D10AQ9BXI6 508 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 TIMMDC1Q9NPL8 285 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 AGAP1Q9UPQ3 857 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 PLA2G6O60733 806 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 CLTBP09497 229 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 CNPP09543 421 aaKnown RBP8.94□□□□□ -0.98
USF3-201ENST00000316407 CPB1P15086 417 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 PHKG2P15735 406 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 RPS6KA3P51812 740 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 NR1H2P55055 460 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 GRM4Q14833 912 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 PI4KBQ9UBF8 816 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 TRIM17Q9Y577 477 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 ERBB3P21860 1342 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 WDR27A2RRH5 827 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 GLRA3O75311 464 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 BHLHB9Q6PI77 547 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 APOPT1Q96IL0 206 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 SPATA33Q96N06 139 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 DYRK4Q9NR20 520 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 LRRC7Q96NW7 1537 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 RHOBTB3O94955 611 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 NADKO95544 446 aaPredicted RBP8.94□□□□□ -0.98
USF3-201ENST00000316407 ABCG1P45844 678 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 PLCL1Q15111 1095 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 PDK1Q15118 436 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 NR6A1Q15406 480 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 RFX4Q33E94 735 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 KLHDC7AQ5VTJ3 777 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 TSEN2Q8NCE0 465 aaKnown RBP8.94□□□□□ -0.98
USF3-201ENST00000316407 LRRC20Q8TCA0 184 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 DPP3Q9NY33 737 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 TRIM64CA6NLI5 447 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 E7ENX8 843 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 RPL5P46777 297 aaKnown RBP8.94□□□□□ -0.98
USF3-201ENST00000316407 ARPC4P59998 168 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 MTFR1Q15390 333 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 TBC1D19Q8N5T2 526 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 FBXO30Q8TB52 745 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 MTFMTQ96DP5 389 aaKnown RBP8.94□□□□□ -0.98
USF3-201ENST00000316407 TPK1Q9H3S4 243 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 COG5Q9UP83 839 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 RLN1P04808 185 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 RCVRNP35243 200 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 FRMD6Q96NE9 622 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 CHMP1AQ9HD42 196 aaPredicted RBP8.94□□□□□ -0.98
USF3-201ENST00000316407 A0A0G2JLW4 131 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 FAM237BA0A1B0GVD1 139 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 C2orf71A6NGG8 1288 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 FAM86B1E9PN63 330 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 GPD1P21695 349 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 MSLNQ13421 630 aaPredicted RBP8.93□□□□□ -0.98
USF3-201ENST00000316407 IL18R1Q13478 541 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 ERO1BQ86YB8 467 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 SRBD1Q8N5C6 995 aaKnown RBP8.93□□□□□ -0.98
USF3-201ENST00000316407 KRT35Q92764 455 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 PIGUQ9H490 435 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 NAGPAQ9UK23 515 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 SNX9Q9Y5X1 595 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 INO80Q9ULG1 1556 aaPredicted RBP8.93□□□□□ -0.98
USF3-201ENST00000316407 NNMTP40261 264 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 ZNF846Q147U1 533 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 C5orf22Q49AR2 442 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 C7orf25Q9BPX7 421 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 VANGL2Q9ULK5 521 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 REREQ9P2R6 1566 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 LRRIQ1Q96JM4 1722 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 H0Y858 1186 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 CCRL2O00421 344 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 MTMR2Q13614 643 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 ERMARDQ5T6L9 678 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 MAFFQ9ULX9 164 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 KPNA5O15131 536 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 NT5C2P49902 561 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 BTN3A2P78410 334 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 TRAP1Q12931 704 aaKnown RBP8.93□□□□□ -0.98
USF3-201ENST00000316407 EIF3MQ7L2H7 374 aaKnown RBP8.93□□□□□ -0.98
USF3-201ENST00000316407 EFL1Q7Z2Z2 1120 aaKnown RBP8.93□□□□□ -0.98
USF3-201ENST00000316407 OSCP1Q8WVF1 389 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 PIGKQ92643 395 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 SPEF1Q9Y4P9 236 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 ATP7AQ04656 1500 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 KIAA0556O60303 1618 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 MAP3K13O43283 966 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 RPL21P46778 160 aaKnown RBP8.93□□□□□ -0.98
USF3-201ENST00000316407 ULK2Q8IYT8 1036 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 VPS33AQ96AX1 596 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 JPH1Q9HDC5 661 aaPredicted RBP8.93□□□□□ -0.98
USF3-201ENST00000316407 DMTF1Q9Y222 760 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 NDUFAF1Q9Y375 327 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 NUP153P49790 1475 aaKnown RBP8.93□□□□□ -0.98
USF3-201ENST00000316407 CPA3P15088 417 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 MAN2A2P49641 1150 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 SATL1Q86VE3 508 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 ZNF276Q8N554 614 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 PRKAG3Q9UGI9 489 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms