RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 PSMB4P28070 264 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 ECHS1P30084 290 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 AVPR1AP37288 418 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 GDF10P55107 478 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 ELF3P78545 371 aaPredicted RBP13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 OGDHQ02218 1023 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 NSUN2Q08J23 767 aaKnown RBP eCLIP13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 MPP3Q13368 585 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 RABGAP1LQ5R372 815 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 FNBP1LQ5T0N5 605 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 SPATA24Q86W54 205 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 NSMCE4AQ9NXX6 385 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 L3MBTL1Q9Y468 752 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 SMIM28A0A1B0GU29 152 aa13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 NCAM2O15394 837 aa13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 ANP32DO95626 131 aa13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 KCNA4P22459 653 aa13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 BDNFP23560 247 aa13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 GLRBP48167 497 aa13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 SERPINB8P50452 374 aa13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 WNT7BP56706 349 aa13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 KCNJ2P63252 427 aa13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 SH3PXD2AQ5TCZ1 1133 aa13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 CHSY1Q86X52 802 aa13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 PLD5Q8N7P1 536 aa13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 GLT1D1Q96MS3 346 aa13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 ADA2Q9NZK5 511 aa13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 TIMM44O43615 452 aa13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 LGR5O75473 907 aa13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 HOXD10P28358 340 aa13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 PTPN4P29074 926 aa13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 GBE1Q04446 702 aa13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 MAP2K5Q13163 448 aa13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 TCEAL1Q15170 157 aa13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 TARBP2Q15633 366 aaKnown RBP13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 C10orf120Q5SQS8 335 aa13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 CYP4X1Q8N118 509 aa13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 PRDM12Q9H4Q4 367 aa13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 RRAGCQ9HB90 399 aa13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 SARS2Q9NP81 518 aaKnown RBP13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 TRPA1O75762 1119 aa13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 RALBP11234 206 aa13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 YBX3P16989 372 aaKnown RBP eCLIP13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 SMPD1P17405 629 aa13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 IL1R2P27930 398 aa13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 GP5P40197 560 aa13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 HSP90AA5PQ58FG0 334 aa13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 DRICH1Q6PGQ1 229 aaPredicted RBP13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 GLIS1Q8NBF1 620 aa13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 OSBPL7Q9BZF2 842 aa13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 TRPV2Q9Y5S1 764 aa13.79□□□□□ -0.2
PCDHB9-201ENST00000316105 FCHO1O14526 889 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 PGAM1P18669 254 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 MATKP42679 507 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 ARHGAP1Q07960 439 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 SPOCK2Q92563 424 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 LPPQ93052 612 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 TKTL2Q9H0I9 626 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 ARMCX1Q9P291 453 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 AAR2Q9Y312 384 aaKnown RBP13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 C2CD4BA6NLJ0 364 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 CALB2P22676 271 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 GPD2P43304 727 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 SNX17Q15036 470 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 CDCA2Q69YH5 1023 aaPredicted RBP13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 C16orf46Q6P387 395 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 RNF168Q8IYW5 571 aaPredicted RBP13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 TEX9Q8N6V9 391 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 MIPOL1Q8TD10 442 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 NDRG1Q92597 394 aaKnown RBP13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 APBB2Q92870 758 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 COL5A3P25940 1745 aaPredicted RBP13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 AIM2O14862 343 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 CPA3P15088 417 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 POU5F1Q01860 360 aaKnown RBP13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 YWHAHQ04917 246 aaPredicted RBP13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 POU6F1Q14863 301 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 LENG1Q96BZ8 264 aaPredicted RBP13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 CMTM5Q96DZ9 223 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 ZNF512Q96ME7 567 aaPredicted RBP13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 SYT11Q9BT88 431 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 SLC17A7Q9P2U7 560 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 CHEK2O96017 543 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 PGK1P00558 417 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 ERVK-10P10266 1014 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 GEMP55040 296 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 SREBF2Q12772 1141 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 PCBP1Q15365 356 aaKnown RBP eCLIP13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 SLC1A5Q15758 541 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 LRRC36Q1X8D7 754 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 C15orf39Q6ZRI6 1047 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 EP400NLQ6ZTU2 488 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 STKLD1Q8NE28 680 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 SEC14L1Q92503 715 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 USP6NLQ92738 828 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 RPRD1AQ96P16 312 aaPredicted RBP13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 EFHD1Q9BUP0 239 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 DPEP3Q9H4B8 488 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms