RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 ALDH9A1P49189 494 aa13.86□□□□□ -0.19
RFFL-201ENST00000315249 ATAT1Q5SQI0 421 aa13.86□□□□□ -0.19
RFFL-201ENST00000315249 LAYNQ6UX15 382 aa13.86□□□□□ -0.19
RFFL-201ENST00000315249 DET1Q7L5Y6 550 aa13.86□□□□□ -0.19
RFFL-201ENST00000315249 BTN2A2Q8WVV5 523 aa13.86□□□□□ -0.19
RFFL-201ENST00000315249 SMG5Q9UPR3 1016 aaKnown RBP13.86□□□□□ -0.19
RFFL-201ENST00000315249 TRIM49D1C9J1S8 452 aa13.85□□□□□ -0.19
RFFL-201ENST00000315249 DGKIO75912 1065 aa13.85□□□□□ -0.19
RFFL-201ENST00000315249 PROSCO94903 275 aa13.85□□□□□ -0.19
RFFL-201ENST00000315249 PAEPP09466 180 aa13.85□□□□□ -0.19
RFFL-201ENST00000315249 AMD1P17707 334 aa13.85□□□□□ -0.19
RFFL-201ENST00000315249 CHI3L1P36222 383 aaPredicted RBP13.85□□□□□ -0.19
RFFL-201ENST00000315249 PTENP60484 403 aa13.85□□□□□ -0.19
RFFL-201ENST00000315249 ZNF268Q14587 947 aaPredicted RBP13.85□□□□□ -0.19
RFFL-201ENST00000315249 PCBP1Q15365 356 aaKnown RBP eCLIP13.85□□□□□ -0.19
RFFL-201ENST00000315249 GPR158Q5T848 1215 aa13.85□□□□□ -0.19
RFFL-201ENST00000315249 LVRNQ6Q4G3 990 aa13.85□□□□□ -0.19
RFFL-201ENST00000315249 EVA1BQ9NVM1 165 aa13.85□□□□□ -0.19
RFFL-201ENST00000315249 CHKAP35790 457 aa13.85□□□□□ -0.19
RFFL-201ENST00000315249 CHI3L2Q15782 390 aa13.85□□□□□ -0.19
RFFL-201ENST00000315249 CBWD6Q4V339 395 aa13.85□□□□□ -0.19
RFFL-201ENST00000315249 FAM162AQ96A26 154 aa13.85□□□□□ -0.19
RFFL-201ENST00000315249 KCNMB3Q9NPA1 279 aa13.85□□□□□ -0.19
RFFL-201ENST00000315249 NFKBIEO00221 500 aa13.85□□□□□ -0.19
RFFL-201ENST00000315249 ARF4P18085 180 aaPredicted RBP13.85□□□□□ -0.19
RFFL-201ENST00000315249 SERPINA4P29622 427 aa13.85□□□□□ -0.19
RFFL-201ENST00000315249 SLC24A5Q71RS6 500 aa13.85□□□□□ -0.19
RFFL-201ENST00000315249 LAG3P18627 525 aa13.85□□□□□ -0.19
RFFL-201ENST00000315249 CASP5P51878 434 aa13.85□□□□□ -0.19
RFFL-201ENST00000315249 TTC7BQ86TV6 843 aa13.85□□□□□ -0.19
RFFL-201ENST00000315249 C12orf29Q8N999 325 aa13.85□□□□□ -0.19
RFFL-201ENST00000315249 HAS1Q92839 578 aa13.85□□□□□ -0.19
RFFL-201ENST00000315249 ECT2Q9H8V3 914 aa13.85□□□□□ -0.19
RFFL-201ENST00000315249 GPSM3Q9Y4H4 160 aa13.85□□□□□ -0.19
RFFL-201ENST00000315249 LUC7L3O95232 432 aaKnown RBP13.85□□□□□ -0.19
RFFL-201ENST00000315249 VSNL1P62760 191 aa13.85□□□□□ -0.19
RFFL-201ENST00000315249 SLC45A4Q5BKX6 768 aa13.85□□□□□ -0.19
RFFL-201ENST00000315249 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.85□□□□□ -0.19
RFFL-201ENST00000315249 SMG7Q92540 1137 aaKnown RBP13.85□□□□□ -0.19
RFFL-201ENST00000315249 ZNHIT2Q9UHR6 403 aa13.85□□□□□ -0.19
RFFL-201ENST00000315249 HPSEQ9Y251 543 aa13.85□□□□□ -0.19
RFFL-201ENST00000315249 V9GYQ6 96 aa13.85□□□□□ -0.19
RFFL-201ENST00000315249 A0A0G2JLL6 359 aaPredicted RBP13.85□□□□□ -0.19
RFFL-201ENST00000315249 SMAPO00193 183 aa13.85□□□□□ -0.19
RFFL-201ENST00000315249 KRT20P35900 424 aa13.85□□□□□ -0.19
RFFL-201ENST00000315249 SNRPD1P62314 119 aaKnown RBP13.85□□□□□ -0.19
RFFL-201ENST00000315249 C11orf63Q6NUN7 778 aa13.85□□□□□ -0.19
RFFL-201ENST00000315249 PRRT2Q7Z6L0 340 aaPredicted RBP13.85□□□□□ -0.19
RFFL-201ENST00000315249 GPR20Q99678 358 aa13.85□□□□□ -0.19
RFFL-201ENST00000315249 WDR41Q9HAD4 459 aa13.85□□□□□ -0.19
RFFL-201ENST00000315249 HLA-DPA1P20036 260 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 TCN1P20061 433 aaPredicted RBP13.84□□□□□ -0.19
RFFL-201ENST00000315249 PRIM2P49643 509 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 GOLGA2P5Q9HBQ8 144 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 NEDD8-MDP1E9PL57 170 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 AIM2O14862 343 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 SKAP2O75563 359 aaPredicted RBP13.84□□□□□ -0.19
RFFL-201ENST00000315249 MMP13P45452 471 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 CCL14Q16627 93 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 PGS1Q32NB8 556 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 MMGT1Q8N4V1 131 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 FBXO36Q8NEA4 188 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 EXD1Q8NHP7 514 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 TCF25Q9BQ70 676 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 CARD9Q9H257 536 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 ZNF556Q9HAH1 456 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 SOHLH2Q9NX45 425 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 MGAT4DA6NG13 374 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 CCZ1BP86790 482 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 CCZ1P86791 482 aaPredicted RBP13.84□□□□□ -0.19
RFFL-201ENST00000315249 TEDDM1Q5T9Z0 273 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 APBB2Q92870 758 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 ZFP42Q96MM3 310 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 C11orf49Q9H6J7 331 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 NDE1Q9NXR1 346 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 SEPT3Q9UH03 358 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 KRT87PA6NCN2 255 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 FAM47E-STBD1D6RA91 191 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 PJA2O43164 708 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 GLUD2P49448 558 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 CCNG1P51959 295 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 C21orf59P57076 290 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 ING5Q8WYH8 240 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 SCLYQ96I15 445 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 MTMR9Q96QG7 549 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 FRMD8P1Q9BZ68 369 aaPredicted RBP13.84□□□□□ -0.19
RFFL-201ENST00000315249 ATP5HO75947 161 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 PTPN3P26045 913 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 NOS2P35228 1153 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 SMAD3P84022 425 aaKnown RBP13.84□□□□□ -0.19
RFFL-201ENST00000315249 TGM3Q08188 693 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 CNTN1Q12860 1018 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 DMC1Q14565 340 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 WARS2Q9UGM6 360 aaKnown RBP13.84□□□□□ -0.19
RFFL-201ENST00000315249 NDRG2Q9UN36 371 aaKnown RBP13.84□□□□□ -0.19
RFFL-201ENST00000315249 CDY1Q9Y6F8 540 aa13.84□□□□□ -0.19
RFFL-201ENST00000315249 GTPBP10A4D1E9 387 aaKnown RBP13.83□□□□□ -0.19
RFFL-201ENST00000315249 C1QTNF3-AMACRE9PGA6 284 aa13.83□□□□□ -0.19
RFFL-201ENST00000315249 F8W810 466 aa13.83□□□□□ -0.19
RFFL-201ENST00000315249 KCNK10P57789 538 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms