RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 PABPC3Q9H361 631 aaKnown RBP25.84■■□□□ 1.73
CDPF1-201ENST00000314567 ANAPC5Q9UJX4 755 aa25.84■■□□□ 1.73
CDPF1-201ENST00000314567 USP3Q9Y6I4 520 aa25.84■■□□□ 1.73
CDPF1-201ENST00000314567 H3BNC9 293 aa25.83■■□□□ 1.73
CDPF1-201ENST00000314567 RFXAPO00287 272 aa25.83■■□□□ 1.73
CDPF1-201ENST00000314567 TP73O15350 636 aa25.83■■□□□ 1.73
CDPF1-201ENST00000314567 TGM2P21980 687 aa25.83■■□□□ 1.73
CDPF1-201ENST00000314567 EIF3BP55884 814 aaKnown RBP25.83■■□□□ 1.73
CDPF1-201ENST00000314567 TPGS2Q68CL5 300 aa25.83■■□□□ 1.73
CDPF1-201ENST00000314567 CEP128Q6ZU80 1094 aa25.83■■□□□ 1.73
CDPF1-201ENST00000314567 NUP93Q8N1F7 819 aa25.83■■□□□ 1.73
CDPF1-201ENST00000314567 IRGQQ8WZA9 623 aa25.83■■□□□ 1.73
CDPF1-201ENST00000314567 FOXP3Q9BZS1 431 aa25.83■■□□□ 1.73
CDPF1-201ENST00000314567 SLC28A3Q9HAS3 691 aa25.83■■□□□ 1.73
CDPF1-201ENST00000314567 REV3LO60673 3130 aa25.83■■□□□ 1.73
CDPF1-201ENST00000314567 PITX1P78337 314 aaPredicted RBP25.83■■□□□ 1.72
CDPF1-201ENST00000314567 MMRN1Q13201 1228 aa25.83■■□□□ 1.72
CDPF1-201ENST00000314567 NOMO1Q15155 1222 aa25.83■■□□□ 1.72
CDPF1-201ENST00000314567 RAB30Q15771 203 aa25.83■■□□□ 1.72
CDPF1-201ENST00000314567 DCAF6Q58WW2 860 aa25.83■■□□□ 1.72
CDPF1-201ENST00000314567 ZC3H12AQ5D1E8 599 aaKnown RBP25.83■■□□□ 1.72
CDPF1-201ENST00000314567 RRN3Q9NYV6 651 aa25.83■■□□□ 1.72
CDPF1-201ENST00000314567 AP4E1Q9UPM8 1137 aa25.83■■□□□ 1.72
CDPF1-201ENST00000314567 SSX2IPQ9Y2D8 614 aa25.83■■□□□ 1.72
CDPF1-201ENST00000314567 YIPF1Q9Y548 306 aa25.83■■□□□ 1.72
CDPF1-201ENST00000314567 NFS1Q9Y697 457 aa25.83■■□□□ 1.72
CDPF1-201ENST00000314567 SGK1O00141 431 aa25.82■■□□□ 1.72
CDPF1-201ENST00000314567 PRRG1O14668 218 aa25.82■■□□□ 1.72
CDPF1-201ENST00000314567 FYNP06241 537 aa25.82■■□□□ 1.72
CDPF1-201ENST00000314567 UBE3AQ05086 875 aa25.82■■□□□ 1.72
CDPF1-201ENST00000314567 ANKRD20A8PQ5CZ79 823 aa25.82■■□□□ 1.72
CDPF1-201ENST00000314567 SYPL2Q5VXT5 272 aa25.82■■□□□ 1.72
CDPF1-201ENST00000314567 IZUMO3Q5VZ72 239 aa25.82■■□□□ 1.72
CDPF1-201ENST00000314567 SLC9A4Q6AI14 798 aa25.82■■□□□ 1.72
CDPF1-201ENST00000314567 PM20D1Q6GTS8 502 aa25.82■■□□□ 1.72
CDPF1-201ENST00000314567 GPR65Q8IYL9 337 aa25.82■■□□□ 1.72
CDPF1-201ENST00000314567 EDEM1Q92611 657 aa25.82■■□□□ 1.72
CDPF1-201ENST00000314567 ZBTB9Q96C00 473 aa25.82■■□□□ 1.72
CDPF1-201ENST00000314567 GPATCH2LQ9NWQ4 482 aa25.82■■□□□ 1.72
CDPF1-201ENST00000314567 MAGED2Q9UNF1 606 aaPredicted RBP25.82■■□□□ 1.72
CDPF1-201ENST00000314567 NAALADL1Q9UQQ1 740 aa25.82■■□□□ 1.72
CDPF1-201ENST00000314567 IRAK3Q9Y616 596 aa25.82■■□□□ 1.72
CDPF1-201ENST00000314567 COL4A4P53420 1690 aaPredicted RBP25.82■■□□□ 1.72
CDPF1-201ENST00000314567 SZT2Q5T011 3432 aa25.82■■□□□ 1.72
CDPF1-201ENST00000314567 GOLGA6L10A6NI86 522 aa25.81■■□□□ 1.72
CDPF1-201ENST00000314567 DNALI1O14645 258 aaPredicted RBP25.81■■□□□ 1.72
CDPF1-201ENST00000314567 PER2O15055 1255 aa25.81■■□□□ 1.72
CDPF1-201ENST00000314567 NUDT17P0C025 328 aa25.81■■□□□ 1.72
CDPF1-201ENST00000314567 IL4RP24394 825 aa25.81■■□□□ 1.72
CDPF1-201ENST00000314567 RDXP35241 583 aaKnown RBP25.81■■□□□ 1.72
CDPF1-201ENST00000314567 VPS41P49754 854 aa25.81■■□□□ 1.72
CDPF1-201ENST00000314567 EIF3EP60228 445 aaKnown RBP25.81■■□□□ 1.72
CDPF1-201ENST00000314567 DENND5BQ6ZUT9 1274 aa25.81■■□□□ 1.72
CDPF1-201ENST00000314567 P3H4Q92791 437 aa25.81■■□□□ 1.72
CDPF1-201ENST00000314567 SAMD11Q96NU1 681 aa25.81■■□□□ 1.72
CDPF1-201ENST00000314567 TMEM121Q9BTD3 319 aa25.81■■□□□ 1.72
CDPF1-201ENST00000314567 PRDM16Q9HAZ2 1276 aa25.81■■□□□ 1.72
CDPF1-201ENST00000314567 NMUR1Q9HB89 426 aa25.81■■□□□ 1.72
CDPF1-201ENST00000314567 CALCOCO1Q9P1Z2 691 aa25.81■■□□□ 1.72
CDPF1-201ENST00000314567 RCOR3Q9P2K3 495 aaPredicted RBP25.81■■□□□ 1.72
CDPF1-201ENST00000314567 SLC38A8A6NNN8 435 aa25.81■■□□□ 1.72
CDPF1-201ENST00000314567 APOL1O14791 398 aa25.81■■□□□ 1.72
CDPF1-201ENST00000314567 ADH1AP07327 375 aa25.81■■□□□ 1.72
CDPF1-201ENST00000314567 PECAM1P16284 738 aaPredicted RBP25.81■■□□□ 1.72
CDPF1-201ENST00000314567 RPL10AP62906 217 aaKnown RBP25.81■■□□□ 1.72
CDPF1-201ENST00000314567 CREMQ03060 361 aa25.81■■□□□ 1.72
CDPF1-201ENST00000314567 CA9Q16790 459 aa25.81■■□□□ 1.72
CDPF1-201ENST00000314567 P3H1Q32P28 736 aa25.81■■□□□ 1.72
CDPF1-201ENST00000314567 CEP85LQ5SZL2 805 aa25.81■■□□□ 1.72
CDPF1-201ENST00000314567 TRMT10CQ7L0Y3 403 aaKnown RBP25.81■■□□□ 1.72
CDPF1-201ENST00000314567 RBM23Q86U06 439 aaKnown RBP25.81■■□□□ 1.72
CDPF1-201ENST00000314567 EMILIN2Q9BXX0 1053 aa25.81■■□□□ 1.72
CDPF1-201ENST00000314567 PRO3102Q9H379 93 aa25.81■■□□□ 1.72
CDPF1-201ENST00000314567 GOLGA6CA6NDK9 693 aa25.8■■□□□ 1.72
CDPF1-201ENST00000314567 GOLGA6DP0CG33 693 aa25.8■■□□□ 1.72
CDPF1-201ENST00000314567 ZFXP17010 805 aaPredicted RBP25.8■■□□□ 1.72
CDPF1-201ENST00000314567 L1CAMP32004 1257 aa25.8■■□□□ 1.72
CDPF1-201ENST00000314567 ELF1P32519 619 aa25.8■■□□□ 1.72
CDPF1-201ENST00000314567 TUFMP49411 452 aaKnown RBP25.8■■□□□ 1.72
CDPF1-201ENST00000314567 AIF1P55008 147 aa25.8■■□□□ 1.72
CDPF1-201ENST00000314567 TWF1Q12792 350 aa25.8■■□□□ 1.72
CDPF1-201ENST00000314567 OTUD1Q5VV17 481 aaPredicted RBP25.8■■□□□ 1.72
CDPF1-201ENST00000314567 DENND2CQ68D51 928 aa25.8■■□□□ 1.72
CDPF1-201ENST00000314567 HIBCHQ6NVY1 386 aaPredicted RBP25.8■■□□□ 1.72
CDPF1-201ENST00000314567 LILRA6Q6PI73 481 aa25.8■■□□□ 1.72
CDPF1-201ENST00000314567 SCD5Q86SK9 330 aa25.8■■□□□ 1.72
CDPF1-201ENST00000314567 RSAD2Q8WXG1 361 aa25.8■■□□□ 1.72
CDPF1-201ENST00000314567 SPATA17Q96L03 361 aa25.8■■□□□ 1.72
CDPF1-201ENST00000314567 TRIM62Q9BVG3 475 aa25.8■■□□□ 1.72
CDPF1-201ENST00000314567 DHX35Q9H5Z1 703 aaKnown RBP25.8■■□□□ 1.72
CDPF1-201ENST00000314567 OSER1Q9NX31 292 aa25.8■■□□□ 1.72
CDPF1-201ENST00000314567 GOLGA6AQ9NYA3 693 aa25.8■■□□□ 1.72
CDPF1-201ENST00000314567 SAE1Q9UBE0 346 aaPredicted RBP25.8■■□□□ 1.72
CDPF1-201ENST00000314567 CAPN9O14815 690 aa25.79■■□□□ 1.72
CDPF1-201ENST00000314567 LTFP02788 710 aa25.79■■□□□ 1.72
CDPF1-201ENST00000314567 ATXN1P54253 815 aaKnown RBP25.79■■□□□ 1.72
CDPF1-201ENST00000314567 ADGRD2Q7Z7M1 963 aa25.79■■□□□ 1.72
CDPF1-201ENST00000314567 SLC7A14Q8TBB6 771 aa25.79■■□□□ 1.72
CDPF1-201ENST00000314567 ADAM32Q8TC27 787 aa25.79■■□□□ 1.72
CDPF1-201ENST00000314567 TIFAQ96CG3 184 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms