RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 ARHGEF4Q9NR80 690 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 NKIRAS1Q9NYS0 192 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 STK38LQ9Y2H1 464 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 TCRBV9S1A1TA0A576 114 aa12.84□□□□□ -0.35
RNF4-201ENST00000314289 ANP32DO95626 131 aa12.84□□□□□ -0.35
RNF4-201ENST00000314289 CA4P22748 312 aa12.84□□□□□ -0.35
RNF4-201ENST00000314289 RPL34P49207 117 aaKnown RBP12.84□□□□□ -0.35
RNF4-201ENST00000314289 GEMIN4P57678 1058 aaKnown RBP12.84□□□□□ -0.35
RNF4-201ENST00000314289 CTAGE3PQ8IX95 158 aa12.84□□□□□ -0.35
RNF4-201ENST00000314289 OR10T2Q8NGX3 314 aa12.84□□□□□ -0.35
RNF4-201ENST00000314289 CD99L2Q8TCZ2 262 aa12.84□□□□□ -0.35
RNF4-201ENST00000314289 AGAP11Q8TF27 550 aa12.84□□□□□ -0.35
RNF4-201ENST00000314289 POPDC2Q9HBU9 364 aa12.84□□□□□ -0.35
RNF4-201ENST00000314289 DDIT4Q9NX09 232 aa12.84□□□□□ -0.35
RNF4-201ENST00000314289 MAGED2Q9UNF1 606 aaPredicted RBP12.84□□□□□ -0.35
RNF4-201ENST00000314289 KCNK1O00180 336 aa12.84□□□□□ -0.35
RNF4-201ENST00000314289 FOXN2P32314 431 aa12.84□□□□□ -0.35
RNF4-201ENST00000314289 SP3Q02447 781 aa12.84□□□□□ -0.35
RNF4-201ENST00000314289 ITIH4Q14624 930 aa12.84□□□□□ -0.35
RNF4-201ENST00000314289 HEATR6Q6AI08 1181 aaKnown RBP12.84□□□□□ -0.35
RNF4-201ENST00000314289 PIGWQ7Z7B1 504 aa12.84□□□□□ -0.35
RNF4-201ENST00000314289 ZNF280BQ86YH2 543 aa12.84□□□□□ -0.35
RNF4-201ENST00000314289 RNF139Q8WU17 664 aa12.84□□□□□ -0.35
RNF4-201ENST00000314289 TGS1Q96RS0 853 aaKnown RBP12.84□□□□□ -0.35
RNF4-201ENST00000314289 NPY6RQ99463 290 aa12.84□□□□□ -0.35
RNF4-201ENST00000314289 UPF3AQ9H1J1 476 aaKnown RBP12.84□□□□□ -0.35
RNF4-201ENST00000314289 PAK5Q9P286 719 aa12.84□□□□□ -0.35
RNF4-201ENST00000314289 GRID1Q9ULK0 1009 aa12.84□□□□□ -0.35
RNF4-201ENST00000314289 A8MUI8 341 aa12.83□□□□□ -0.36
RNF4-201ENST00000314289 UGT1A9O60656 530 aa12.83□□□□□ -0.36
RNF4-201ENST00000314289 NOS2P35228 1153 aa12.83□□□□□ -0.36
RNF4-201ENST00000314289 LHX1P48742 406 aa12.83□□□□□ -0.36
RNF4-201ENST00000314289 SLC45A4Q5BKX6 768 aa12.83□□□□□ -0.36
RNF4-201ENST00000314289 STRADAQ7RTN6 431 aa12.83□□□□□ -0.36
RNF4-201ENST00000314289 CAND1Q86VP6 1230 aaKnown RBP12.83□□□□□ -0.36
RNF4-201ENST00000314289 UNC5BQ8IZJ1 945 aa12.83□□□□□ -0.36
RNF4-201ENST00000314289 SMC6Q96SB8 1091 aa12.83□□□□□ -0.36
RNF4-201ENST00000314289 NSRP1Q9H0G5 558 aaKnown RBP12.83□□□□□ -0.36
RNF4-201ENST00000314289 UGT1A7Q9HAW7 530 aa12.83□□□□□ -0.36
RNF4-201ENST00000314289 UGT1A10Q9HAW8 530 aa12.83□□□□□ -0.36
RNF4-201ENST00000314289 UGT1A8Q9HAW9 530 aa12.83□□□□□ -0.36
RNF4-201ENST00000314289 CHST12Q9NRB3 414 aa12.83□□□□□ -0.36
RNF4-201ENST00000314289 GIT1Q9Y2X7 761 aa12.83□□□□□ -0.36
RNF4-201ENST00000314289 A0A0U1RQF3 1178 aa12.83□□□□□ -0.36
RNF4-201ENST00000314289 DAB1O75553 588 aa12.83□□□□□ -0.36
RNF4-201ENST00000314289 PGFP49763 221 aa12.83□□□□□ -0.36
RNF4-201ENST00000314289 DAOAP59103 153 aa12.83□□□□□ -0.36
RNF4-201ENST00000314289 SLC1A5Q15758 541 aa12.83□□□□□ -0.36
RNF4-201ENST00000314289 SDHAF4Q5VUM1 108 aa12.83□□□□□ -0.36
RNF4-201ENST00000314289 CCSAPQ6IQ19 270 aaPredicted RBP12.83□□□□□ -0.36
RNF4-201ENST00000314289 CEP128Q6ZU80 1094 aa12.83□□□□□ -0.36
RNF4-201ENST00000314289 KLC2Q9H0B6 622 aa12.83□□□□□ -0.36
RNF4-201ENST00000314289 ECT2Q9H8V3 914 aa12.83□□□□□ -0.36
RNF4-201ENST00000314289 PSMC3IPQ9P2W1 217 aaPredicted RBP12.83□□□□□ -0.36
RNF4-201ENST00000314289 ZMYND8Q9ULU4 1186 aaPredicted RBP12.83□□□□□ -0.36
RNF4-201ENST00000314289 USP3Q9Y6I4 520 aa12.83□□□□□ -0.36
RNF4-201ENST00000314289 BCLAF3A2AJT9 711 aaKnown RBP12.82□□□□□ -0.36
RNF4-201ENST00000314289 FAM47DPA6NHR8 397 aa12.82□□□□□ -0.36
RNF4-201ENST00000314289 CXorf49A8MYA2 514 aaPredicted RBP12.82□□□□□ -0.36
RNF4-201ENST00000314289 E7ESA3 106 aa12.82□□□□□ -0.36
RNF4-201ENST00000314289 PHBP35232 272 aa12.82□□□□□ -0.36
RNF4-201ENST00000314289 MSH2P43246 934 aa12.82□□□□□ -0.36
RNF4-201ENST00000314289 NUMBP49757 651 aa12.82□□□□□ -0.36
RNF4-201ENST00000314289 ACLYP53396 1101 aa12.82□□□□□ -0.36
RNF4-201ENST00000314289 DNAJC3Q13217 504 aa12.82□□□□□ -0.36
RNF4-201ENST00000314289 SPARCL1Q14515 664 aa12.82□□□□□ -0.36
RNF4-201ENST00000314289 ARHGEF18Q6ZSZ5 1173 aa12.82□□□□□ -0.36
RNF4-201ENST00000314289 KLHDC9Q8NEP7 349 aa12.82□□□□□ -0.36
RNF4-201ENST00000314289 GPBP1L1Q9HC44 474 aaPredicted RBP12.82□□□□□ -0.36
RNF4-201ENST00000314289 SLCO1B3Q9NPD5 702 aa12.82□□□□□ -0.36
RNF4-201ENST00000314289 IL1RAPL1Q9NZN1 696 aa12.82□□□□□ -0.36
RNF4-201ENST00000314289 STAP1Q9ULZ2 295 aa12.82□□□□□ -0.36
RNF4-201ENST00000314289 PRG3Q9Y2Y8 225 aaPredicted RBP12.82□□□□□ -0.36
RNF4-201ENST00000314289 TEX264Q9Y6I9 313 aa12.82□□□□□ -0.36
RNF4-201ENST00000314289 BPTFQ12830 3046 aa12.82□□□□□ -0.36
RNF4-201ENST00000314289 EIF4E1BA6NMX2 242 aaKnown RBP12.82□□□□□ -0.36
RNF4-201ENST00000314289 DIAPH2O60879 1101 aa12.82□□□□□ -0.36
RNF4-201ENST00000314289 GSTA1P08263 222 aa12.82□□□□□ -0.36
RNF4-201ENST00000314289 EFHC2Q5JST6 749 aa12.82□□□□□ -0.36
RNF4-201ENST00000314289 CD300LGQ6UXG3 332 aa12.82□□□□□ -0.36
RNF4-201ENST00000314289 RTN4RL1Q86UN2 441 aaPredicted RBP12.82□□□□□ -0.36
RNF4-201ENST00000314289 VPS52Q8N1B4 723 aa12.82□□□□□ -0.36
RNF4-201ENST00000314289 PPM1NQ8N819 430 aa12.82□□□□□ -0.36
RNF4-201ENST00000314289 PDCD7Q8N8D1 485 aaKnown RBP12.82□□□□□ -0.36
RNF4-201ENST00000314289 B3GALT6Q96L58 329 aa12.82□□□□□ -0.36
RNF4-201ENST00000314289 AGAP3Q96P47 875 aa12.82□□□□□ -0.36
RNF4-201ENST00000314289 ACSS3Q9H6R3 686 aa12.82□□□□□ -0.36
RNF4-201ENST00000314289 SLC17A6Q9P2U8 582 aa12.82□□□□□ -0.36
RNF4-201ENST00000314289 ZC3H7BQ9UGR2 993 aaKnown RBP12.82□□□□□ -0.36
RNF4-201ENST00000314289 C15orf41Q9Y2V0 281 aa12.82□□□□□ -0.36
RNF4-201ENST00000314289 EEF2KO00418 725 aaKnown RBP12.82□□□□□ -0.36
RNF4-201ENST00000314289 F7P08709 466 aaPredicted RBP12.82□□□□□ -0.36
RNF4-201ENST00000314289 NQO1P15559 274 aaKnown RBP12.82□□□□□ -0.36
RNF4-201ENST00000314289 MBTPS1Q14703 1052 aa12.82□□□□□ -0.36
RNF4-201ENST00000314289 CASC4Q6P4E1 433 aa12.82□□□□□ -0.36
RNF4-201ENST00000314289 TRMT10BQ6PF06 316 aaKnown RBP12.82□□□□□ -0.36
RNF4-201ENST00000314289 CDKL3Q8IVW4 592 aaPredicted RBP12.82□□□□□ -0.36
RNF4-201ENST00000314289 TFB1MQ8WVM0 346 aaKnown RBP12.82□□□□□ -0.36
RNF4-201ENST00000314289 HTR3CQ8WXA8 447 aa12.82□□□□□ -0.36
RNF4-201ENST00000314289 RNF34Q969K3 372 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms