RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 PROSCO94903 275 aa18.87■□□□□ 0.61
HMGA1-201ENST00000311487 FTCDO95954 541 aa18.87■□□□□ 0.61
HMGA1-201ENST00000311487 COMTP21964 271 aa18.87■□□□□ 0.61
HMGA1-201ENST00000311487 TRIP4Q15650 581 aaPredicted RBP18.87■□□□□ 0.61
HMGA1-201ENST00000311487 BEND5Q7L4P6 421 aa18.87■□□□□ 0.61
HMGA1-201ENST00000311487 BBS7Q8IWZ6 715 aa18.87■□□□□ 0.61
HMGA1-201ENST00000311487 PYROXD2Q8N2H3 581 aa18.87■□□□□ 0.61
HMGA1-201ENST00000311487 TDRD5Q8NAT2 981 aaKnown RBP18.87■□□□□ 0.61
HMGA1-201ENST00000311487 CENPIQ92674 756 aaPredicted RBP18.87■□□□□ 0.61
HMGA1-201ENST00000311487 ZFP14Q9HCL3 533 aa18.87■□□□□ 0.61
HMGA1-201ENST00000311487 ARHGAP26Q9UNA1 814 aa18.87■□□□□ 0.61
HMGA1-201ENST00000311487 SH3BP1Q9Y3L3 701 aa18.87■□□□□ 0.61
HMGA1-201ENST00000311487 WNT6Q9Y6F9 365 aa18.87■□□□□ 0.61
HMGA1-201ENST00000311487 DENND4AQ7Z401 1863 aa18.87■□□□□ 0.61
HMGA1-201ENST00000311487 A0A0A6YYK5 440 aaPredicted RBP18.86■□□□□ 0.61
HMGA1-201ENST00000311487 RNF8O76064 485 aa18.86■□□□□ 0.61
HMGA1-201ENST00000311487 COG7P83436 770 aa18.86■□□□□ 0.61
HMGA1-201ENST00000311487 EIF4EBP2Q13542 120 aaPredicted RBP18.86■□□□□ 0.61
HMGA1-201ENST00000311487 VITQ6UXI7 678 aa18.86■□□□□ 0.61
HMGA1-201ENST00000311487 ALG6Q9Y672 507 aa18.86■□□□□ 0.61
HMGA1-201ENST00000311487 GREM1O60565 184 aa18.86■□□□□ 0.61
HMGA1-201ENST00000311487 MTA2O94776 668 aa18.86■□□□□ 0.61
HMGA1-201ENST00000311487 SLU7O95391 586 aaKnown RBP18.86■□□□□ 0.61
HMGA1-201ENST00000311487 PIGHQ14442 188 aaPredicted RBP18.86■□□□□ 0.61
HMGA1-201ENST00000311487 RFWD3Q6PCD5 774 aa18.86■□□□□ 0.61
HMGA1-201ENST00000311487 SND1Q7KZF4 910 aaKnown RBP eCLIP18.86■□□□□ 0.61
HMGA1-201ENST00000311487 BNIPLQ7Z465 357 aa18.86■□□□□ 0.61
HMGA1-201ENST00000311487 ZNF276Q8N554 614 aa18.86■□□□□ 0.61
HMGA1-201ENST00000311487 CELF5Q8N6W0 485 aaKnown RBP18.86■□□□□ 0.61
HMGA1-201ENST00000311487 FNIP1Q8TF40 1166 aa18.86■□□□□ 0.61
HMGA1-201ENST00000311487 HSPH1Q92598 858 aa18.86■□□□□ 0.61
HMGA1-201ENST00000311487 MYEOVQ96EZ4 313 aa18.86■□□□□ 0.61
HMGA1-201ENST00000311487 ASIC4Q96FT7 647 aa18.86■□□□□ 0.61
HMGA1-201ENST00000311487 SLC39A13Q96H72 371 aa18.86■□□□□ 0.61
HMGA1-201ENST00000311487 TSGA10Q9BZW7 698 aa18.86■□□□□ 0.61
HMGA1-201ENST00000311487 AGO1Q9UL18 857 aaKnown RBP18.86■□□□□ 0.61
HMGA1-201ENST00000311487 USP18Q9UMW8 372 aa18.86■□□□□ 0.61
HMGA1-201ENST00000311487 TSPAN3O60637 253 aa18.85■□□□□ 0.61
HMGA1-201ENST00000311487 CASQ1P31415 396 aa18.85■□□□□ 0.61
HMGA1-201ENST00000311487 CCR1P32246 355 aa18.85■□□□□ 0.61
HMGA1-201ENST00000311487 HARS2P49590 506 aaKnown RBP18.85■□□□□ 0.61
HMGA1-201ENST00000311487 CXCR3P49682 368 aa18.85■□□□□ 0.61
HMGA1-201ENST00000311487 NUMBP49757 651 aa18.85■□□□□ 0.61
HMGA1-201ENST00000311487 TNK2Q07912 1038 aa18.85■□□□□ 0.61
HMGA1-201ENST00000311487 LLGL1Q15334 1064 aa18.85■□□□□ 0.61
HMGA1-201ENST00000311487 STRADAQ7RTN6 431 aa18.85■□□□□ 0.61
HMGA1-201ENST00000311487 MYO10Q9HD67 2058 aa18.85■□□□□ 0.61
HMGA1-201ENST00000311487 BTNL10A8MVZ5 291 aa18.84■□□□□ 0.61
HMGA1-201ENST00000311487 SPOPO43791 374 aa18.84■□□□□ 0.61
HMGA1-201ENST00000311487 PAGE1O75459 146 aa18.84■□□□□ 0.61
HMGA1-201ENST00000311487 ENDOD1O94919 500 aa18.84■□□□□ 0.61
HMGA1-201ENST00000311487 ZNF77Q15935 545 aa18.84■□□□□ 0.61
HMGA1-201ENST00000311487 CA9Q16790 459 aa18.84■□□□□ 0.61
HMGA1-201ENST00000311487 NADSYN1Q6IA69 706 aa18.84■□□□□ 0.61
HMGA1-201ENST00000311487 TPGS1Q6ZTW0 290 aa18.84■□□□□ 0.61
HMGA1-201ENST00000311487 RRN3Q9NYV6 651 aa18.84■□□□□ 0.61
HMGA1-201ENST00000311487 HBS1LQ9Y450 684 aaKnown RBP18.84■□□□□ 0.61
HMGA1-201ENST00000311487 KCNU1A8MYU2 1149 aa18.84■□□□□ 0.61
HMGA1-201ENST00000311487 FAM72CH0Y354 149 aa18.84■□□□□ 0.61
HMGA1-201ENST00000311487 PRPSAP2O60256 369 aa18.84■□□□□ 0.61
HMGA1-201ENST00000311487 SRGAP2O75044 1071 aa18.84■□□□□ 0.61
HMGA1-201ENST00000311487 F9P00740 461 aa18.84■□□□□ 0.61
HMGA1-201ENST00000311487 IGLV3-27P01718 113 aa18.84■□□□□ 0.61
HMGA1-201ENST00000311487 SLC6A4P31645 630 aa18.84■□□□□ 0.61
HMGA1-201ENST00000311487 MARCKSL1P49006 195 aa18.84■□□□□ 0.61
HMGA1-201ENST00000311487 AAK1Q2M2I8 961 aa18.84■□□□□ 0.61
HMGA1-201ENST00000311487 ZFYVE27Q5T4F4 411 aa18.84■□□□□ 0.61
HMGA1-201ENST00000311487 FAM72AQ5TYM5 149 aa18.84■□□□□ 0.61
HMGA1-201ENST00000311487 RAP1GAP2Q684P5 730 aa18.84■□□□□ 0.61
HMGA1-201ENST00000311487 FAM72DQ6L9T8 149 aa18.84■□□□□ 0.61
HMGA1-201ENST00000311487 CYP4V2Q6ZWL3 525 aaPredicted RBP18.84■□□□□ 0.61
HMGA1-201ENST00000311487 FAM72BQ86X60 149 aa18.84■□□□□ 0.61
HMGA1-201ENST00000311487 TXLNBQ8N3L3 684 aa18.84■□□□□ 0.61
HMGA1-201ENST00000311487 LRRC57Q8N9N7 239 aa18.84■□□□□ 0.61
HMGA1-201ENST00000311487 PGAP3Q96FM1 320 aaPredicted RBP18.84■□□□□ 0.61
HMGA1-201ENST00000311487 P2RY11Q96G91 374 aa18.84■□□□□ 0.61
HMGA1-201ENST00000311487 NECAB3Q96P71 396 aaPredicted RBP18.84■□□□□ 0.61
HMGA1-201ENST00000311487 KCNK12Q9HB15 430 aa18.84■□□□□ 0.61
HMGA1-201ENST00000311487 EPS15L1Q9UBC2 864 aa18.84■□□□□ 0.61
HMGA1-201ENST00000311487 URI1O94763 535 aaPredicted RBP18.83■□□□□ 0.6
HMGA1-201ENST00000311487 APOEP02649 317 aa18.83■□□□□ 0.6
HMGA1-201ENST00000311487 NAA30Q147X3 362 aaPredicted RBP18.83■□□□□ 0.6
HMGA1-201ENST00000311487 TCEAL1Q15170 157 aa18.83■□□□□ 0.6
HMGA1-201ENST00000311487 PIK3R6Q5UE93 754 aa18.83■□□□□ 0.6
HMGA1-201ENST00000311487 SLFN11Q7Z7L1 901 aa18.83■□□□□ 0.6
HMGA1-201ENST00000311487 CFAP52Q8N1V2 620 aa18.83■□□□□ 0.6
HMGA1-201ENST00000311487 BPIFB1Q8TDL5 484 aa18.83■□□□□ 0.6
HMGA1-201ENST00000311487 ANKRD7Q92527 254 aa18.83■□□□□ 0.6
HMGA1-201ENST00000311487 PLD4Q96BZ4 506 aa18.83■□□□□ 0.6
HMGA1-201ENST00000311487 EBF3Q9H4W6 596 aa18.83■□□□□ 0.6
HMGA1-201ENST00000311487 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.83■□□□□ 0.6
HMGA1-201ENST00000311487 PLK2Q9NYY3 685 aa18.83■□□□□ 0.6
HMGA1-201ENST00000311487 NR2E1Q9Y466 385 aa18.83■□□□□ 0.6
HMGA1-201ENST00000311487 OTOL1A6NHN0 477 aaPredicted RBP18.82■□□□□ 0.6
HMGA1-201ENST00000311487 KIF5CO60282 957 aa18.82■□□□□ 0.6
HMGA1-201ENST00000311487 ARSAP15289 507 aa18.82■□□□□ 0.6
HMGA1-201ENST00000311487 ADRA1BP35368 520 aa18.82■□□□□ 0.6
HMGA1-201ENST00000311487 SGSHP51688 502 aa18.82■□□□□ 0.6
HMGA1-201ENST00000311487 SLC25A11Q02978 314 aaKnown RBP18.82■□□□□ 0.6
HMGA1-201ENST00000311487 HTR4Q13639 388 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms