RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 FBXO41Q8TF61 875 aa15.7■□□□□ 0.1
SPIRE1-201ENST00000309836 HTR3CQ8WXA8 447 aa15.7■□□□□ 0.1
SPIRE1-201ENST00000309836 LGMNQ99538 433 aa15.7■□□□□ 0.1
SPIRE1-201ENST00000309836 SNX25Q9H3E2 840 aa15.7■□□□□ 0.1
SPIRE1-201ENST00000309836 TMPRSS4Q9NRS4 437 aa15.7■□□□□ 0.1
SPIRE1-201ENST00000309836 GDAP2Q9NXN4 497 aa15.7■□□□□ 0.1
SPIRE1-201ENST00000309836 KCNK4Q9NYG8 393 aa15.7■□□□□ 0.1
SPIRE1-201ENST00000309836 UTRNP46939 3433 aa15.7■□□□□ 0.1
SPIRE1-201ENST00000309836 SMIM28A0A1B0GU29 152 aa15.69■□□□□ 0.1
SPIRE1-201ENST00000309836 RRN3P2A6NIE6 340 aa15.69■□□□□ 0.1
SPIRE1-201ENST00000309836 KPNA7A9QM74 516 aa15.69■□□□□ 0.1
SPIRE1-201ENST00000309836 SNNO75324 88 aaPredicted RBP15.69■□□□□ 0.1
SPIRE1-201ENST00000309836 FDFT1P37268 417 aa15.69■□□□□ 0.1
SPIRE1-201ENST00000309836 SULT1E1P49888 294 aa15.69■□□□□ 0.1
SPIRE1-201ENST00000309836 CRADDP78560 199 aa15.69■□□□□ 0.1
SPIRE1-201ENST00000309836 SOX4Q06945 474 aaPredicted RBP15.69■□□□□ 0.1
SPIRE1-201ENST00000309836 NIPAL4Q0D2K0 466 aa15.69■□□□□ 0.1
SPIRE1-201ENST00000309836 HIC1Q14526 733 aa15.69■□□□□ 0.1
SPIRE1-201ENST00000309836 ATG16L1Q676U5 607 aa15.69■□□□□ 0.1
SPIRE1-201ENST00000309836 DSTYKQ6XUX3 929 aa15.69■□□□□ 0.1
SPIRE1-201ENST00000309836 MARK2Q7KZI7 788 aaKnown RBP15.69■□□□□ 0.1
SPIRE1-201ENST00000309836 ADGRF2Q8IZF7 708 aa15.69■□□□□ 0.1
SPIRE1-201ENST00000309836 STKLD1Q8NE28 680 aa15.69■□□□□ 0.1
SPIRE1-201ENST00000309836 HSFY1Q96LI6 401 aa15.69■□□□□ 0.1
SPIRE1-201ENST00000309836 C20orf27Q9GZN8 174 aa15.69■□□□□ 0.1
SPIRE1-201ENST00000309836 RNF39Q9H2S5 420 aa15.69■□□□□ 0.1
SPIRE1-201ENST00000309836 GOLGA2P5Q9HBQ8 144 aa15.69■□□□□ 0.1
SPIRE1-201ENST00000309836 ARMCX1Q9P291 453 aa15.69■□□□□ 0.1
SPIRE1-201ENST00000309836 BTBD19C9JJ37 291 aa15.69■□□□□ 0.1
SPIRE1-201ENST00000309836 E7ENQ6 273 aa15.69■□□□□ 0.1
SPIRE1-201ENST00000309836 H0Y3Z8 333 aa15.69■□□□□ 0.1
SPIRE1-201ENST00000309836 DAB1O75553 588 aa15.69■□□□□ 0.1
SPIRE1-201ENST00000309836 ALDH1A2O94788 518 aa15.69■□□□□ 0.1
SPIRE1-201ENST00000309836 SMIM10L2AP0DMW4 78 aa15.69■□□□□ 0.1
SPIRE1-201ENST00000309836 SMIM10L2BP0DMW5 78 aa15.69■□□□□ 0.1
SPIRE1-201ENST00000309836 MATKP42679 507 aa15.69■□□□□ 0.1
SPIRE1-201ENST00000309836 NAA25Q14CX7 972 aa15.69■□□□□ 0.1
SPIRE1-201ENST00000309836 CYS1Q717R9 158 aa15.69■□□□□ 0.1
SPIRE1-201ENST00000309836 TREML1Q86YW5 311 aa15.69■□□□□ 0.1
SPIRE1-201ENST00000309836 COLGALT1Q8NBJ5 622 aa15.69■□□□□ 0.1
SPIRE1-201ENST00000309836 SLC10A4Q96EP9 437 aa15.69■□□□□ 0.1
SPIRE1-201ENST00000309836 MAML3Q96JK9 1138 aa15.69■□□□□ 0.1
SPIRE1-201ENST00000309836 HBS1LQ9Y450 684 aaKnown RBP15.69■□□□□ 0.1
SPIRE1-201ENST00000309836 CAPN14A8MX76 684 aa15.68■□□□□ 0.1
SPIRE1-201ENST00000309836 RNF103O00237 685 aa15.68■□□□□ 0.1
SPIRE1-201ENST00000309836 XPO1O14980 1071 aaKnown RBP15.68■□□□□ 0.1
SPIRE1-201ENST00000309836 BIRC5O15392 142 aa15.68■□□□□ 0.1
SPIRE1-201ENST00000309836 STRNO43815 780 aa15.68■□□□□ 0.1
SPIRE1-201ENST00000309836 GSRP00390 522 aa15.68■□□□□ 0.1
SPIRE1-201ENST00000309836 CD4P01730 458 aa15.68■□□□□ 0.1
SPIRE1-201ENST00000309836 RARBP10826 455 aa15.68■□□□□ 0.1
SPIRE1-201ENST00000309836 MLNP12872 115 aa15.68■□□□□ 0.1
SPIRE1-201ENST00000309836 ARL4AP40617 200 aa15.68■□□□□ 0.1
SPIRE1-201ENST00000309836 ADIGQ0VDE8 80 aa15.68■□□□□ 0.1
SPIRE1-201ENST00000309836 TAF11Q15544 211 aa15.68■□□□□ 0.1
SPIRE1-201ENST00000309836 SLC25A52Q3SY17 297 aa15.68■□□□□ 0.1
SPIRE1-201ENST00000309836 KHDC1Q4VXA5 237 aaKnown RBP15.68■□□□□ 0.1
SPIRE1-201ENST00000309836 EFHC1Q5JVL4 640 aa15.68■□□□□ 0.1
SPIRE1-201ENST00000309836 UBXN11Q5T124 520 aa15.68■□□□□ 0.1
SPIRE1-201ENST00000309836 USP50Q70EL3 339 aaPredicted RBP15.68■□□□□ 0.1
SPIRE1-201ENST00000309836 BZW1Q7L1Q6 419 aaKnown RBP15.68■□□□□ 0.1
SPIRE1-201ENST00000309836 GPR142Q7Z601 462 aa15.68■□□□□ 0.1
SPIRE1-201ENST00000309836 ARID3BQ8IVW6 561 aaPredicted RBP15.68■□□□□ 0.1
SPIRE1-201ENST00000309836 RAB3IL1Q8TBN0 382 aa15.68■□□□□ 0.1
SPIRE1-201ENST00000309836 ZNF560Q96MR9 790 aa15.68■□□□□ 0.1
SPIRE1-201ENST00000309836 TRIM6Q9C030 488 aaPredicted RBP15.68■□□□□ 0.1
SPIRE1-201ENST00000309836 PIH1D1Q9NWS0 290 aaKnown RBP15.68■□□□□ 0.1
SPIRE1-201ENST00000309836 TAS2R1Q9NYW7 299 aa15.68■□□□□ 0.1
SPIRE1-201ENST00000309836 RCOR3Q9P2K3 495 aaPredicted RBP15.68■□□□□ 0.1
SPIRE1-201ENST00000309836 MORF4L1Q9UBU8 362 aa15.68■□□□□ 0.1
SPIRE1-201ENST00000309836 EMCNQ9ULC0 261 aa15.68■□□□□ 0.1
SPIRE1-201ENST00000309836 ZNF638Q14966 1978 aaKnown RBP15.68■□□□□ 0.1
SPIRE1-201ENST00000309836 GYG2O15488 501 aa15.67■□□□□ 0.1
SPIRE1-201ENST00000309836 ESRRAP11474 423 aaPredicted RBP15.67■□□□□ 0.1
SPIRE1-201ENST00000309836 CYP2C9P11712 490 aa15.67■□□□□ 0.1
SPIRE1-201ENST00000309836 KCNE1P15382 129 aa15.67■□□□□ 0.1
SPIRE1-201ENST00000309836 MGAT1P26572 445 aa15.67■□□□□ 0.1
SPIRE1-201ENST00000309836 CDK18Q07002 472 aa15.67■□□□□ 0.1
SPIRE1-201ENST00000309836 GRB14Q14449 540 aa15.67■□□□□ 0.1
SPIRE1-201ENST00000309836 XKR4Q5GH76 650 aa15.67■□□□□ 0.1
SPIRE1-201ENST00000309836 LRRC8BQ6P9F7 803 aa15.67■□□□□ 0.1
SPIRE1-201ENST00000309836 PACS1Q6VY07 963 aa15.67■□□□□ 0.1
SPIRE1-201ENST00000309836 BNIPLQ7Z465 357 aa15.67■□□□□ 0.1
SPIRE1-201ENST00000309836 DPP9Q86TI2 863 aa15.67■□□□□ 0.1
SPIRE1-201ENST00000309836 PIGZQ86VD9 579 aa15.67■□□□□ 0.1
SPIRE1-201ENST00000309836 PDCD7Q8N8D1 485 aaKnown RBP15.67■□□□□ 0.1
SPIRE1-201ENST00000309836 APPL2Q8NEU8 664 aa15.67■□□□□ 0.1
SPIRE1-201ENST00000309836 RNF139Q8WU17 664 aa15.67■□□□□ 0.1
SPIRE1-201ENST00000309836 ZC3H15Q8WU90 426 aaKnown RBP15.67■□□□□ 0.1
SPIRE1-201ENST00000309836 TMEM40Q8WWA1 233 aa15.67■□□□□ 0.1
SPIRE1-201ENST00000309836 ARNTL2Q8WYA1 636 aa15.67■□□□□ 0.1
SPIRE1-201ENST00000309836 MS4A4AQ96JQ5 239 aa15.67■□□□□ 0.1
SPIRE1-201ENST00000309836 ANKRD27Q96NW4 1050 aa15.67■□□□□ 0.1
SPIRE1-201ENST00000309836 CEP41Q9BYV8 373 aa15.67■□□□□ 0.1
SPIRE1-201ENST00000309836 XPNPEP3Q9NQH7 507 aa15.67■□□□□ 0.1
SPIRE1-201ENST00000309836 EIF2B3Q9NR50 452 aaKnown RBP15.67■□□□□ 0.1
SPIRE1-201ENST00000309836 LRRC42Q9Y546 428 aa15.67■□□□□ 0.1
SPIRE1-201ENST00000309836 SMIM35A0A1B0GVV1 85 aa15.67■□□□□ 0.1
SPIRE1-201ENST00000309836 MBLAC1A4D2B0 266 aaPredicted RBP15.67■□□□□ 0.1
SPIRE1-201ENST00000309836 SDR42E2A6NKP2 422 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms