RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 PI4KAP42356 2102 aa20.35■□□□□ 0.85
LIME1-201ENST00000309546 GON4LQ3T8J9 2241 aa20.34■□□□□ 0.85
LIME1-201ENST00000309546 ADAMTS9Q9P2N4 1935 aa20.34■□□□□ 0.85
LIME1-201ENST00000309546 TM4SF5O14894 197 aa20.34■□□□□ 0.85
LIME1-201ENST00000309546 LETM1O95202 739 aaPredicted RBP20.34■□□□□ 0.85
LIME1-201ENST00000309546 CFIP05156 583 aa20.34■□□□□ 0.85
LIME1-201ENST00000309546 ZNF445P59923 1031 aa20.34■□□□□ 0.85
LIME1-201ENST00000309546 EIF4HQ15056 248 aaKnown RBP20.34■□□□□ 0.85
LIME1-201ENST00000309546 FUT11Q495W5 492 aa20.34■□□□□ 0.85
LIME1-201ENST00000309546 SPDYCQ5MJ68 293 aa20.34■□□□□ 0.85
LIME1-201ENST00000309546 DENND1BQ6P3S1 775 aa20.34■□□□□ 0.85
LIME1-201ENST00000309546 FAM149B1Q96BN6 582 aa20.34■□□□□ 0.85
LIME1-201ENST00000309546 LSM14BQ9BX40 385 aaKnown RBP20.34■□□□□ 0.85
LIME1-201ENST00000309546 NUSAP1Q9BXS6 441 aaKnown RBP20.34■□□□□ 0.85
LIME1-201ENST00000309546 SLC2A11Q9BYW1 496 aa20.34■□□□□ 0.85
LIME1-201ENST00000309546 CKAP5Q14008 2032 aa20.34■□□□□ 0.85
LIME1-201ENST00000309546 NPC1O15118 1278 aa20.33■□□□□ 0.85
LIME1-201ENST00000309546 THAP12O43422 761 aa20.33■□□□□ 0.85
LIME1-201ENST00000309546 MED7O43513 233 aa20.33■□□□□ 0.85
LIME1-201ENST00000309546 SYNCRIPO60506 623 aaKnown RBP20.33■□□□□ 0.85
LIME1-201ENST00000309546 LATS1O95835 1130 aa20.33■□□□□ 0.85
LIME1-201ENST00000309546 NCAM1P13591 858 aa20.33■□□□□ 0.85
LIME1-201ENST00000309546 USP8P40818 1118 aa20.33■□□□□ 0.85
LIME1-201ENST00000309546 DPP6P42658 865 aa20.33■□□□□ 0.85
LIME1-201ENST00000309546 GPD2P43304 727 aa20.33■□□□□ 0.85
LIME1-201ENST00000309546 TBX4P57082 545 aa20.33■□□□□ 0.85
LIME1-201ENST00000309546 ZNF33AQ06730 810 aa20.33■□□□□ 0.85
LIME1-201ENST00000309546 ZNF234Q14588 700 aa20.33■□□□□ 0.85
LIME1-201ENST00000309546 TPD52L1Q16890 204 aaPredicted RBP20.33■□□□□ 0.85
LIME1-201ENST00000309546 UAP1L1Q3KQV9 507 aa20.33■□□□□ 0.85
LIME1-201ENST00000309546 ADGRF1Q5T601 910 aa20.33■□□□□ 0.85
LIME1-201ENST00000309546 DAB2IPQ5VWQ8 1189 aa20.33■□□□□ 0.85
LIME1-201ENST00000309546 NUGGCQ68CJ6 796 aa20.33■□□□□ 0.85
LIME1-201ENST00000309546 GJB7Q6PEY0 223 aa20.33■□□□□ 0.85
LIME1-201ENST00000309546 TRIM65Q6PJ69 517 aa20.33■□□□□ 0.85
LIME1-201ENST00000309546 SERPINA13PQ6UXR4 307 aa20.33■□□□□ 0.85
LIME1-201ENST00000309546 CACUL1Q86Y37 369 aa20.33■□□□□ 0.85
LIME1-201ENST00000309546 TMA16Q96EY4 203 aaKnown RBP20.33■□□□□ 0.85
LIME1-201ENST00000309546 PRDM16Q9HAZ2 1276 aa20.33■□□□□ 0.85
LIME1-201ENST00000309546 EVLQ9UI08 416 aaPredicted RBP20.33■□□□□ 0.85
LIME1-201ENST00000309546 STOML2Q9UJZ1 356 aa20.33■□□□□ 0.85
LIME1-201ENST00000309546 CNTN6Q9UQ52 1028 aa20.33■□□□□ 0.85
LIME1-201ENST00000309546 NDUFS2O75306 463 aa20.32■□□□□ 0.84
LIME1-201ENST00000309546 SLC9A1P19634 815 aa20.32■□□□□ 0.84
LIME1-201ENST00000309546 PRKCHP24723 683 aa20.32■□□□□ 0.84
LIME1-201ENST00000309546 HLA-FP30511 346 aa20.32■□□□□ 0.84
LIME1-201ENST00000309546 GNA15P30679 374 aa20.32■□□□□ 0.84
LIME1-201ENST00000309546 MAPK8P45983 427 aa20.32■□□□□ 0.84
LIME1-201ENST00000309546 MTIF2P46199 727 aaKnown RBP20.32■□□□□ 0.84
LIME1-201ENST00000309546 SLC11A2P49281 568 aa20.32■□□□□ 0.84
LIME1-201ENST00000309546 SGSHP51688 502 aa20.32■□□□□ 0.84
LIME1-201ENST00000309546 E2F5Q15329 346 aa20.32■□□□□ 0.84
LIME1-201ENST00000309546 ARHGAP44Q17R89 818 aa20.32■□□□□ 0.84
LIME1-201ENST00000309546 TMEM215Q68D42 235 aa20.32■□□□□ 0.84
LIME1-201ENST00000309546 RFWD3Q6PCD5 774 aa20.32■□□□□ 0.84
LIME1-201ENST00000309546 UNC45BQ8IWX7 931 aa20.32■□□□□ 0.84
LIME1-201ENST00000309546 SCUBE3Q8IX30 993 aa20.32■□□□□ 0.84
LIME1-201ENST00000309546 HSPA12BQ96MM6 686 aa20.32■□□□□ 0.84
LIME1-201ENST00000309546 ACP6Q9NPH0 428 aa20.32■□□□□ 0.84
LIME1-201ENST00000309546 PILRBQ9UKJ0 227 aa20.32■□□□□ 0.84
LIME1-201ENST00000309546 CNOT1A5YKK6 2376 aaKnown RBP20.32■□□□□ 0.84
LIME1-201ENST00000309546 LAMA1P25391 3075 aa20.32■□□□□ 0.84
LIME1-201ENST00000309546 GOLGA6L7A0A1B0GV03 622 aa20.31■□□□□ 0.84
LIME1-201ENST00000309546 TBL1XO60907 577 aa20.31■□□□□ 0.84
LIME1-201ENST00000309546 KCNK5O95279 499 aa20.31■□□□□ 0.84
LIME1-201ENST00000309546 IGLV3-27P01718 113 aa20.31■□□□□ 0.84
LIME1-201ENST00000309546 EPHX1P07099 455 aa20.31■□□□□ 0.84
LIME1-201ENST00000309546 ACADSBP45954 432 aa20.31■□□□□ 0.84
LIME1-201ENST00000309546 NOVA1P51513 510 aaKnown RBP20.31■□□□□ 0.84
LIME1-201ENST00000309546 APBA1Q02410 837 aa20.31■□□□□ 0.84
LIME1-201ENST00000309546 LMAN2Q12907 356 aa20.31■□□□□ 0.84
LIME1-201ENST00000309546 ENPP2Q13822 863 aa20.31■□□□□ 0.84
LIME1-201ENST00000309546 N4BP2L1Q5TBK1 243 aaPredicted RBP20.31■□□□□ 0.84
LIME1-201ENST00000309546 PSAPL1Q6NUJ1 521 aa20.31■□□□□ 0.84
LIME1-201ENST00000309546 GBP6Q6ZN66 633 aa20.31■□□□□ 0.84
LIME1-201ENST00000309546 CHST9Q7L1S5 443 aa20.31■□□□□ 0.84
LIME1-201ENST00000309546 ENOSF1Q7L5Y1 443 aa20.31■□□□□ 0.84
LIME1-201ENST00000309546 ADAM32Q8TC27 787 aa20.31■□□□□ 0.84
LIME1-201ENST00000309546 DQX1Q8TE96 717 aaKnown RBP20.31■□□□□ 0.84
LIME1-201ENST00000309546 CYB5D2Q8WUJ1 264 aa20.31■□□□□ 0.84
LIME1-201ENST00000309546 CNTNAP3BQ96NU0 1288 aa20.31■□□□□ 0.84
LIME1-201ENST00000309546 MED15Q96RN5 788 aa20.31■□□□□ 0.84
LIME1-201ENST00000309546 CNTNAP3Q9BZ76 1288 aa20.31■□□□□ 0.84
LIME1-201ENST00000309546 MKRN2Q9H000 416 aaKnown RBP20.31■□□□□ 0.84
LIME1-201ENST00000309546 FSCN3Q9NQT6 498 aa20.31■□□□□ 0.84
LIME1-201ENST00000309546 ABCB8Q9NUT2 735 aa20.31■□□□□ 0.84
LIME1-201ENST00000309546 NAALADL1Q9UQQ1 740 aa20.31■□□□□ 0.84
LIME1-201ENST00000309546 MUC22E2RYF6 1773 aaPredicted RBP20.31■□□□□ 0.84
LIME1-201ENST00000309546 CDX4O14627 284 aaPredicted RBP20.3■□□□□ 0.84
LIME1-201ENST00000309546 CAPN9O14815 690 aa20.3■□□□□ 0.84
LIME1-201ENST00000309546 SART1O43290 800 aaKnown RBP20.3■□□□□ 0.84
LIME1-201ENST00000309546 ACSL4O60488 711 aa20.3■□□□□ 0.84
LIME1-201ENST00000309546 PABPC1P11940 636 aaKnown RBP20.3■□□□□ 0.84
LIME1-201ENST00000309546 HLA-EP13747 358 aa20.3■□□□□ 0.84
LIME1-201ENST00000309546 ENGP17813 658 aa20.3■□□□□ 0.84
LIME1-201ENST00000309546 SLC6A4P31645 630 aa20.3■□□□□ 0.84
LIME1-201ENST00000309546 RING1Q06587 406 aa20.3■□□□□ 0.84
LIME1-201ENST00000309546 FNDC3BQ53EP0 1204 aaKnown RBP20.3■□□□□ 0.84
LIME1-201ENST00000309546 PEAR1Q5VY43 1037 aaPredicted RBP20.3■□□□□ 0.84
LIME1-201ENST00000309546 SLC41A1Q8IVJ1 513 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms