RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 RBBP6Q7Z6E9 1792 aaKnown RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 GSG1L2A8MUP6 293 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 ZNF701M0R085 212 aaPredicted RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 POMCP01189 267 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 CYP19A1P11511 503 aaPredicted RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 MAPK10P53779 464 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 ATP6V0D1P61421 351 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 TTC33Q6PID6 262 aaPredicted RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 STOX1Q6ZVD7 989 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 C7orf31Q8N865 590 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 NIPA2Q8N8Q9 360 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 FAM45AQ8TCE6 357 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 TRERF1Q96PN7 1200 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 TRIM8Q9BZR9 551 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 TSPAN1O60635 241 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 HNRNPCP07910 306 aaKnown RBP eCLIP4.12□□□□□ -1.75
USH2A-201ENST00000307340 CLK1P49759 484 aaKnown RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 FAM187BQ17R55 369 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 ERICH5Q6P6B1 374 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 HCN3Q9P1Z3 774 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.12□□□□□ -1.75
USH2A-201ENST00000307340 PCM1Q15154 2024 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 ALDH1A2O94788 518 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 NCF2P19878 526 aaPredicted RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 MAGEA10P43363 369 aaPredicted RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 HUNKP57058 714 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 ALDH6A1Q02252 535 aaKnown RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 DDR2Q16832 855 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 KCNT1Q5JUK3 1230 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 TUBA3EQ6PEY2 450 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 GLB1LQ6UWU2 654 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 GPR141Q7Z602 305 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 HEXIM2Q96MH2 286 aaKnown RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 SMIM22K7EJ46 135 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 DNAJB6O75190 326 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 SCNN1GP51170 649 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 CYP4A11Q02928 519 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 IRGCQ6NXR0 463 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 CYS1Q717R9 158 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 TMEM132CQ8N3T6 1108 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 FEZF2Q8TBJ5 459 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 LRRC2Q9BYS8 371 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 RGL1Q9NZL6 768 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 FAM220BPB1ANY3 271 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 MYBL2P10244 700 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 PTPN3P26045 913 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 ZNF438Q7Z4V0 828 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 ATP6V0D2Q8N8Y2 350 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 ZNF514Q96K75 400 aaPredicted RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 USE1Q9NZ43 259 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 SORBS3O60504 671 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 ANP32DO95626 131 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 ATP1A2P50993 1020 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 CTDSPL2Q05D32 466 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 ZNF235Q14590 738 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 PSMD5Q16401 504 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 CERS6Q6ZMG9 384 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 ADAMTSL2Q86TH1 951 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 TXNRD3Q86VQ6 643 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 DDX43Q9NXZ2 648 aaKnown RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 ST3GAL5Q9UNP4 418 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 PRG3Q9Y2Y8 225 aaPredicted RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 MARF1Q9Y4F3 1742 aaKnown RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 ZCCHC18P0CG32 403 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 EIF5AP63241 154 aaKnown RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 RETSATQ6NUM9 610 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 MZT2AQ6P582 158 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 TC2NQ8N9U0 490 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 PROCA1Q8NCQ7 364 aaPredicted RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 TTLQ8NG68 377 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 RFKQ969G6 155 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 SPATA33Q96N06 139 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 MLPHQ9BV36 600 aaPredicted RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 NMRAL1Q9HBL8 299 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 GTF2IRD1Q9UHL9 959 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 WBP11Q9Y2W2 641 aaKnown RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 CNTNAP2Q9UHC6 1331 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 CAMTA1Q9Y6Y1 1673 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 RNASEH1O60930 286 aaKnown RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 SERPINE1P05121 402 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 GTF2A2P52657 109 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 ST8SIA6P61647 398 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 EMC10Q5UCC4 262 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 RWDD4Q6NW29 188 aaKnown RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 ZNF507Q8TCN5 953 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 NANSQ9NR45 359 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 INTS7Q9NVH2 962 aaKnown RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 SCAF8Q9UPN6 1271 aaKnown RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 VPS26AO75436 327 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 SEC31AO94979 1220 aaKnown RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 GSTM2P28161 218 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 BCAMP50895 628 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 RPL13AP3Q6NVV1 102 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 SKA2Q8WVK7 121 aaPredicted RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 DPF2Q92785 391 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 TIFAQ96CG3 184 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 TMEM9Q9P0T7 183 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 SLC45A1Q9Y2W3 748 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 MTA2O94776 668 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 ROR2Q01974 943 aaKnown RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms