RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 TLR10Q9BXR5 811 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 TKTL2Q9H0I9 626 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.86□□□□□ -0.83
RFX3-201ENST00000302303 COX16Q9P0S2 106 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 PCSK1NQ9UHG2 260 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 STOML2Q9UJZ1 356 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 AGO1Q9UL18 857 aaKnown RBP9.86□□□□□ -0.83
RFX3-201ENST00000302303 FZD10Q9ULW2 581 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 USP18Q9UMW8 372 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 PACSIN2Q9UNF0 486 aaPredicted RBP9.86□□□□□ -0.83
RFX3-201ENST00000302303 NEU3Q9UQ49 428 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 USTQ9Y2C2 406 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 SNX10Q9Y5X0 201 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 GOLGA6L7A0A1B0GV03 622 aa9.85□□□□□ -0.83
RFX3-201ENST00000302303 ANHXE9PGG2 379 aa9.85□□□□□ -0.83
RFX3-201ENST00000302303 SCAMP3O14828 347 aaKnown RBP9.85□□□□□ -0.83
RFX3-201ENST00000302303 PAGE1O75459 146 aa9.85□□□□□ -0.83
RFX3-201ENST00000302303 CKMP06732 381 aa9.85□□□□□ -0.83
RFX3-201ENST00000302303 SLC6A4P31645 630 aa9.85□□□□□ -0.83
RFX3-201ENST00000302303 SLC1A1P43005 524 aa9.85□□□□□ -0.83
RFX3-201ENST00000302303 MLLT6P55198 1093 aaPredicted RBP9.85□□□□□ -0.83
RFX3-201ENST00000302303 SCAPQ12770 1279 aa9.85□□□□□ -0.83
RFX3-201ENST00000302303 ARHGAP15Q53QZ3 475 aa9.85□□□□□ -0.83
RFX3-201ENST00000302303 FAM133BQ5BKY9 247 aaKnown RBP9.85□□□□□ -0.83
RFX3-201ENST00000302303 KCNT1Q5JUK3 1230 aa9.85□□□□□ -0.83
RFX3-201ENST00000302303 BRMS1LQ5PSV4 323 aa9.85□□□□□ -0.83
RFX3-201ENST00000302303 PIK3R6Q5UE93 754 aa9.85□□□□□ -0.83
RFX3-201ENST00000302303 MANEALQ5VSG8 457 aa9.85□□□□□ -0.83
RFX3-201ENST00000302303 DCAF12L1Q5VU92 463 aa9.85□□□□□ -0.83
RFX3-201ENST00000302303 PARM1Q6UWI2 310 aa9.85□□□□□ -0.83
RFX3-201ENST00000302303 C14orf80Q86SX3 495 aa9.85□□□□□ -0.83
RFX3-201ENST00000302303 TADA2BQ86TJ2 420 aa9.85□□□□□ -0.83
RFX3-201ENST00000302303 ZSCAN30Q86W11 494 aa9.85□□□□□ -0.83
RFX3-201ENST00000302303 FAM217AQ8IXS0 508 aa9.85□□□□□ -0.83
RFX3-201ENST00000302303 SLC35F6Q8N357 371 aa9.85□□□□□ -0.83
RFX3-201ENST00000302303 TXLNBQ8N3L3 684 aa9.85□□□□□ -0.83
RFX3-201ENST00000302303 SMARCD2Q92925 531 aa9.85□□□□□ -0.83
RFX3-201ENST00000302303 AZIN2Q96A70 460 aa9.85□□□□□ -0.83
RFX3-201ENST00000302303 ACSF2Q96CM8 615 aaPredicted RBP9.85□□□□□ -0.83
RFX3-201ENST00000302303 ASIC4Q96FT7 647 aa9.85□□□□□ -0.83
RFX3-201ENST00000302303 SNRNP25Q9BV90 132 aaKnown RBP9.85□□□□□ -0.83
RFX3-201ENST00000302303 LINC00597Q9H2U6 94 aa9.85□□□□□ -0.83
RFX3-201ENST00000302303 WDCPQ9H6R7 721 aa9.85□□□□□ -0.83
RFX3-201ENST00000302303 FAM204AQ9H8W3 233 aa9.85□□□□□ -0.83
RFX3-201ENST00000302303 GPATCH2LQ9NWQ4 482 aa9.85□□□□□ -0.83
RFX3-201ENST00000302303 EPS15L1Q9UBC2 864 aa9.85□□□□□ -0.83
RFX3-201ENST00000302303 ZMYM5Q9UJ78 669 aa9.85□□□□□ -0.83
RFX3-201ENST00000302303 PCDHA3Q9Y5H8 950 aa9.85□□□□□ -0.83
RFX3-201ENST00000302303 NUP210Q8TEM1 1887 aaPredicted RBP9.84□□□□□ -0.83
RFX3-201ENST00000302303 C2CD4DB7Z1M9 353 aa9.84□□□□□ -0.83
RFX3-201ENST00000302303 RNF8O76064 485 aa9.84□□□□□ -0.83
RFX3-201ENST00000302303 CD48P09326 243 aa9.84□□□□□ -0.83
RFX3-201ENST00000302303 IRF1P10914 325 aa9.84□□□□□ -0.83
RFX3-201ENST00000302303 IL9P15248 144 aa9.84□□□□□ -0.83
RFX3-201ENST00000302303 CTNNA2P26232 953 aa9.84□□□□□ -0.83
RFX3-201ENST00000302303 CORO1AP31146 461 aaKnown RBP9.84□□□□□ -0.83
RFX3-201ENST00000302303 L1CAMP32004 1257 aa9.84□□□□□ -0.83
RFX3-201ENST00000302303 CCR1P32246 355 aa9.84□□□□□ -0.83
RFX3-201ENST00000302303 GBP1P32455 592 aa9.84□□□□□ -0.83
RFX3-201ENST00000302303 CTNNA1P35221 906 aaKnown RBP9.84□□□□□ -0.83
RFX3-201ENST00000302303 AVPR1AP37288 418 aa9.84□□□□□ -0.83
RFX3-201ENST00000302303 KPNA1P52294 538 aaPredicted RBP9.84□□□□□ -0.83
RFX3-201ENST00000302303 NAP1L1P55209 391 aaKnown RBP9.84□□□□□ -0.83
RFX3-201ENST00000302303 TAZQ16635 292 aa9.84□□□□□ -0.83
RFX3-201ENST00000302303 MS4A13Q5J8X5 152 aa9.84□□□□□ -0.83
RFX3-201ENST00000302303 ZNF569Q5MCW4 686 aa9.84□□□□□ -0.83
RFX3-201ENST00000302303 ERMARDQ5T6L9 678 aa9.84□□□□□ -0.83
RFX3-201ENST00000302303 LRRC38Q5VT99 294 aa9.84□□□□□ -0.83
RFX3-201ENST00000302303 SCYL2Q6P3W7 929 aa9.84□□□□□ -0.83
RFX3-201ENST00000302303 VITQ6UXI7 678 aa9.84□□□□□ -0.83
RFX3-201ENST00000302303 BBS7Q8IWZ6 715 aa9.84□□□□□ -0.83
RFX3-201ENST00000302303 TRIM58Q8NG06 486 aa9.84□□□□□ -0.83
RFX3-201ENST00000302303 RAPGEF5Q92565 580 aa9.84□□□□□ -0.83
RFX3-201ENST00000302303 TSC1Q92574 1164 aa9.84□□□□□ -0.83
RFX3-201ENST00000302303 PLD4Q96BZ4 506 aa9.84□□□□□ -0.83
RFX3-201ENST00000302303 C1orf74Q96LT6 269 aa9.84□□□□□ -0.83
RFX3-201ENST00000302303 HAPLN3Q96S86 360 aa9.84□□□□□ -0.83
RFX3-201ENST00000302303 PHF7Q9BWX1 381 aaPredicted RBP9.84□□□□□ -0.83
RFX3-201ENST00000302303 SLITRK6Q9H5Y7 841 aa9.84□□□□□ -0.83
RFX3-201ENST00000302303 CFAP97Q9P2B7 532 aa9.84□□□□□ -0.83
RFX3-201ENST00000302303 LCMT1Q9UIC8 334 aa9.84□□□□□ -0.83
RFX3-201ENST00000302303 HS3ST4Q9Y661 456 aa9.84□□□□□ -0.83
RFX3-201ENST00000302303 HELZP42694 1942 aaKnown RBP9.84□□□□□ -0.83
RFX3-201ENST00000302303 VCANP13611 3396 aa9.84□□□□□ -0.83
RFX3-201ENST00000302303 E2F8A0AVK6 867 aa9.83□□□□□ -0.84
RFX3-201ENST00000302303 GOLGA6L9A6NEM1 432 aa9.83□□□□□ -0.84
RFX3-201ENST00000302303 HEPACAM2A8MVW5 462 aa9.83□□□□□ -0.84
RFX3-201ENST00000302303 ACSL4O60488 711 aa9.83□□□□□ -0.84
RFX3-201ENST00000302303 SP100P23497 879 aaPredicted RBP9.83□□□□□ -0.84
RFX3-201ENST00000302303 GGCXP38435 758 aa9.83□□□□□ -0.84
RFX3-201ENST00000302303 IRAK1P51617 712 aa9.83□□□□□ -0.84
RFX3-201ENST00000302303 SGSHP51688 502 aa9.83□□□□□ -0.84
RFX3-201ENST00000302303 FCHO2Q0JRZ9 810 aa9.83□□□□□ -0.84
RFX3-201ENST00000302303 HTR4Q13639 388 aa9.83□□□□□ -0.84
RFX3-201ENST00000302303 DPYSL2Q16555 572 aa9.83□□□□□ -0.84
RFX3-201ENST00000302303 IFI16Q16666 785 aaKnown RBP9.83□□□□□ -0.84
RFX3-201ENST00000302303 SMTNL2Q2TAL5 461 aa9.83□□□□□ -0.84
RFX3-201ENST00000302303 C5orf22Q49AR2 442 aa9.83□□□□□ -0.84
RFX3-201ENST00000302303 BOLA3Q53S33 107 aa9.83□□□□□ -0.84
RFX3-201ENST00000302303 PTCRAQ6ISU1 281 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms