RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 PCSK7Q16549 785 aa16.1■□□□□ 0.17
CHAF1A-201ENST00000301280 MARCH8Q5T0T0 291 aa16.1■□□□□ 0.17
CHAF1A-201ENST00000301280 OLFML2BQ68BL8 750 aa16.1■□□□□ 0.17
CHAF1A-201ENST00000301280 RFWD3Q6PCD5 774 aa16.1■□□□□ 0.17
CHAF1A-201ENST00000301280 RIBC1Q8N443 379 aaPredicted RBP16.1■□□□□ 0.17
CHAF1A-201ENST00000301280 KCTD15Q96SI1 283 aaPredicted RBP16.1■□□□□ 0.17
CHAF1A-201ENST00000301280 BCO2Q9BYV7 579 aa16.1■□□□□ 0.17
CHAF1A-201ENST00000301280 ULBP1Q9BZM6 244 aa16.1■□□□□ 0.17
CHAF1A-201ENST00000301280 DDX43Q9NXZ2 648 aaKnown RBP16.1■□□□□ 0.17
CHAF1A-201ENST00000301280 EFR3BQ9Y2G0 817 aa16.1■□□□□ 0.17
CHAF1A-201ENST00000301280 RPS6KL1Q9Y6S9 549 aa16.1■□□□□ 0.17
CHAF1A-201ENST00000301280 SCN1AP35498 2009 aa16.1■□□□□ 0.17
CHAF1A-201ENST00000301280 DOCK3Q8IZD9 2030 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 HAUS5O94927 633 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 BRCC3P46736 316 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 SCNN1GP51170 649 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 SEPT6Q14141 434 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 NOMO1Q15155 1222 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 BOLA3Q53S33 107 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 VWA5B1Q5TIE3 1220 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 C9orf57Q5W0N0 161 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 AGGF1Q8N302 714 aaeCLIP16.09■□□□□ 0.174e-9■■■■□ 23.1
CHAF1A-201ENST00000301280 MAB21L3Q8N8X9 362 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 OR52K1Q8NGK4 314 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 MCRS1Q96EZ8 462 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 ACSS3Q9H6R3 686 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 ARHGEF3Q9NR81 526 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 TSR3Q9UJK0 312 aaKnown RBP16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 GOLGA8QA0A0J9YX86 632 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 MYBPHLA2RUH7 354 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 GOLGA8OA6NCC3 632 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 GOLGA8NF8WBI6 632 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 FAM72CH0Y354 149 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 SERPINB4P48594 390 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 AQP5P55064 265 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 FAM72AQ5TYM5 149 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 FAM72DQ6L9T8 149 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 LCLAT1Q6UWP7 414 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 UNC5AQ6ZN44 842 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 PLEKHH3Q7Z736 793 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 FAM72BQ86X60 149 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 CMASQ8NFW8 434 aaPredicted RBP16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 ZNF669Q96BR6 464 aaPredicted RBP16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 TBC1D10AQ9BXI6 508 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 ARL8BQ9NVJ2 186 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 PSAT1Q9Y617 370 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 RNF103O00237 685 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 GAS2O43903 313 aaKnown RBP16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 MT-CO1P00395 513 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 TYK2P29597 1187 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 ZNF157P51786 506 aaPredicted RBP16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 CCNHP51946 323 aaPredicted RBP16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 EXOC8Q8IYI6 725 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 CFAP61Q8NHU2 1237 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 FAM161BQ96MY7 647 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 TTC1Q99614 292 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 PAK5Q9P286 719 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 NKX1-2Q9UD57 310 aaPredicted RBP16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 ITGA11Q9UKX5 1188 aa16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 SMG5Q9UPR3 1016 aaKnown RBP16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 PRG3Q9Y2Y8 225 aaPredicted RBP16.09■□□□□ 0.17
CHAF1A-201ENST00000301280 TTC3P53804 2025 aa16.08■□□□□ 0.17
CHAF1A-201ENST00000301280 EDF1O60869 148 aaKnown RBP16.08■□□□□ 0.17
CHAF1A-201ENST00000301280 IL4RP24394 825 aa16.08■□□□□ 0.17
CHAF1A-201ENST00000301280 STIP1P31948 543 aaKnown RBP16.08■□□□□ 0.17
CHAF1A-201ENST00000301280 ABL2P42684 1182 aa16.08■□□□□ 0.17
CHAF1A-201ENST00000301280 OLFML1Q6UWY5 402 aa16.08■□□□□ 0.17
CHAF1A-201ENST00000301280 CEP128Q6ZU80 1094 aa16.08■□□□□ 0.17
CHAF1A-201ENST00000301280 PAF1Q8N7H5 531 aa16.08■□□□□ 0.17
CHAF1A-201ENST00000301280 PPTC7Q8NI37 304 aa16.08■□□□□ 0.17
CHAF1A-201ENST00000301280 CSPG4P5Q96PW8 444 aa16.08■□□□□ 0.17
CHAF1A-201ENST00000301280 LHX5Q9H2C1 402 aa16.08■□□□□ 0.17
CHAF1A-201ENST00000301280 SLC5A4Q9NY91 659 aa16.08■□□□□ 0.17
CHAF1A-201ENST00000301280 ZFATQ9P243 1243 aa16.08■□□□□ 0.17
CHAF1A-201ENST00000301280 FETUBQ9UGM5 382 aa16.08■□□□□ 0.17
CHAF1A-201ENST00000301280 ZMYND8Q9ULU4 1186 aaPredicted RBP16.08■□□□□ 0.17
CHAF1A-201ENST00000301280 TTC24A2A3L6 582 aaPredicted RBP16.08■□□□□ 0.16
CHAF1A-201ENST00000301280 JCHAINP01591 159 aa16.08■□□□□ 0.16
CHAF1A-201ENST00000301280 BDNFP23560 247 aa16.08■□□□□ 0.16
CHAF1A-201ENST00000301280 MSX2P35548 267 aaPredicted RBP16.08■□□□□ 0.16
CHAF1A-201ENST00000301280 SOX11P35716 441 aa16.08■□□□□ 0.16
CHAF1A-201ENST00000301280 TAF6P49848 677 aa16.08■□□□□ 0.16
CHAF1A-201ENST00000301280 BST1Q10588 318 aa16.08■□□□□ 0.16
CHAF1A-201ENST00000301280 NXNQ6DKJ4 435 aa16.08■□□□□ 0.16
CHAF1A-201ENST00000301280 RGS9BPQ6ZS82 235 aa16.08■□□□□ 0.16
CHAF1A-201ENST00000301280 SCYL1Q96KG9 808 aa16.08■□□□□ 0.16
CHAF1A-201ENST00000301280 NUMBLQ9Y6R0 609 aa16.08■□□□□ 0.16
CHAF1A-201ENST00000301280 DNAJC25-GNG10A0A024R161 153 aa16.07■□□□□ 0.16
CHAF1A-201ENST00000301280 EEF2KO00418 725 aaKnown RBP16.07■□□□□ 0.16
CHAF1A-201ENST00000301280 DGKIO75912 1065 aa16.07■□□□□ 0.16
CHAF1A-201ENST00000301280 SLC26A2P50443 739 aa16.07■□□□□ 0.16
CHAF1A-201ENST00000301280 MFSD10Q14728 455 aa16.07■□□□□ 0.16
CHAF1A-201ENST00000301280 PDK4Q16654 411 aa16.07■□□□□ 0.16
CHAF1A-201ENST00000301280 HSP90AA5PQ58FG0 334 aa16.07■□□□□ 0.16
CHAF1A-201ENST00000301280 FAM219BQ5XKK7 198 aa16.07■□□□□ 0.16
CHAF1A-201ENST00000301280 OSTM1Q86WC4 334 aa16.07■□□□□ 0.16
CHAF1A-201ENST00000301280 DCAKDQ8WVC6 231 aa16.07■□□□□ 0.16
CHAF1A-201ENST00000301280 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.07■□□□□ 0.16
CHAF1A-201ENST00000301280 EME2A4GXA9 379 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms