RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 MTFR1Q15390 333 aa22.67■■□□□ 1.22
TPM4-201ENST00000300933 DPYSL2Q16555 572 aa22.67■■□□□ 1.22
TPM4-201ENST00000300933 KBTBD12Q3ZCT8 623 aa22.67■■□□□ 1.22
TPM4-201ENST00000300933 OTUD1Q5VV17 481 aaPredicted RBP22.67■■□□□ 1.22
TPM4-201ENST00000300933 ZNF449Q6P9G9 518 aa22.67■■□□□ 1.22
TPM4-201ENST00000300933 PCED1BQ96HM7 432 aa22.67■■□□□ 1.22
TPM4-201ENST00000300933 SLC10A3P09131 477 aa22.66■■□□□ 1.22
TPM4-201ENST00000300933 CYBAP13498 195 aa22.66■■□□□ 1.22
TPM4-201ENST00000300933 GM2AP17900 193 aa22.66■■□□□ 1.22
TPM4-201ENST00000300933 PRKCZQ05513 592 aa22.66■■□□□ 1.22
TPM4-201ENST00000300933 ANO7Q6IWH7 933 aa22.66■■□□□ 1.22
TPM4-201ENST00000300933 SIX6OS1Q8N1H7 587 aa22.66■■□□□ 1.22
TPM4-201ENST00000300933 TOP6BLQ8N6T0 577 aa22.66■■□□□ 1.22
TPM4-201ENST00000300933 HSFY1Q96LI6 401 aa22.66■■□□□ 1.22
TPM4-201ENST00000300933 SMC6Q96SB8 1091 aa22.66■■□□□ 1.22
TPM4-201ENST00000300933 ULBP1Q9BZM6 244 aa22.66■■□□□ 1.22
TPM4-201ENST00000300933 ALG13Q9NP73 1137 aaKnown RBP22.66■■□□□ 1.22
TPM4-201ENST00000300933 SLCO1B3Q9NPD5 702 aa22.66■■□□□ 1.22
TPM4-201ENST00000300933 DTLQ9NZJ0 730 aa22.66■■□□□ 1.22
TPM4-201ENST00000300933 PSMC3IPQ9P2W1 217 aaPredicted RBP22.66■■□□□ 1.22
TPM4-201ENST00000300933 ZNF236Q9UL36 1845 aa22.66■■□□□ 1.22
TPM4-201ENST00000300933 TCRBV9S1A1TA0A576 114 aa22.66■■□□□ 1.22
TPM4-201ENST00000300933 YJEFN3A6XGL0 299 aa22.66■■□□□ 1.22
TPM4-201ENST00000300933 E7ENQ6 273 aa22.66■■□□□ 1.22
TPM4-201ENST00000300933 E7ESA3 106 aa22.66■■□□□ 1.22
TPM4-201ENST00000300933 LIN7AO14910 233 aaPredicted RBP22.66■■□□□ 1.22
TPM4-201ENST00000300933 ASGR1P07306 291 aa22.66■■□□□ 1.22
TPM4-201ENST00000300933 USP17L7P0C7H9 530 aa22.66■■□□□ 1.22
TPM4-201ENST00000300933 TAC1P20366 129 aa22.66■■□□□ 1.22
TPM4-201ENST00000300933 TGM2P21980 687 aa22.66■■□□□ 1.22
TPM4-201ENST00000300933 CCND3P30281 292 aaPredicted RBP22.66■■□□□ 1.22
TPM4-201ENST00000300933 TUBP50607 506 aa22.66■■□□□ 1.22
TPM4-201ENST00000300933 CCNG1P51959 295 aa22.66■■□□□ 1.22
TPM4-201ENST00000300933 MRPS5P82675 430 aaKnown RBP22.66■■□□□ 1.22
TPM4-201ENST00000300933 DNAJC3Q13217 504 aa22.66■■□□□ 1.22
TPM4-201ENST00000300933 EFHC2Q5JST6 749 aa22.66■■□□□ 1.22
TPM4-201ENST00000300933 RNF43Q68DV7 783 aa22.66■■□□□ 1.22
TPM4-201ENST00000300933 ARHGEF18Q6ZSZ5 1173 aa22.66■■□□□ 1.22
TPM4-201ENST00000300933 MAGEB18Q96M61 343 aa22.66■■□□□ 1.22
TPM4-201ENST00000300933 RNPEPL1Q9HAU8 725 aa22.66■■□□□ 1.22
TPM4-201ENST00000300933 ANLNQ9NQW6 1124 aa22.66■■□□□ 1.22
TPM4-201ENST00000300933 FAM155AB1AL88 458 aaPredicted RBP22.65■■□□□ 1.22
TPM4-201ENST00000300933 GNAZP19086 355 aa22.65■■□□□ 1.22
TPM4-201ENST00000300933 LRPAP1P30533 357 aa22.65■■□□□ 1.22
TPM4-201ENST00000300933 BRCC3P46736 316 aa22.65■■□□□ 1.22
TPM4-201ENST00000300933 NCBP2-AS2Q69YL0 99 aa22.65■■□□□ 1.22
TPM4-201ENST00000300933 RNF217Q8TC41 542 aa22.65■■□□□ 1.22
TPM4-201ENST00000300933 EDEM1Q92611 657 aa22.65■■□□□ 1.22
TPM4-201ENST00000300933 PIGVQ9NUD9 493 aa22.65■■□□□ 1.22
TPM4-201ENST00000300933 CALB2P22676 271 aa22.65■■□□□ 1.22
TPM4-201ENST00000300933 PHBP35232 272 aa22.65■■□□□ 1.22
TPM4-201ENST00000300933 ACADSBP45954 432 aa22.65■■□□□ 1.22
TPM4-201ENST00000300933 KCNA10Q16322 511 aa22.65■■□□□ 1.22
TPM4-201ENST00000300933 EFHC1Q5JVL4 640 aa22.65■■□□□ 1.22
TPM4-201ENST00000300933 CAND1Q86VP6 1230 aaKnown RBP22.65■■□□□ 1.22
TPM4-201ENST00000300933 MPP5Q8N3R9 675 aa22.65■■□□□ 1.22
TPM4-201ENST00000300933 SLC7A14Q8TBB6 771 aa22.65■■□□□ 1.22
TPM4-201ENST00000300933 NUDCD1Q96RS6 583 aa22.65■■□□□ 1.22
TPM4-201ENST00000300933 SMOQ99835 787 aa22.65■■□□□ 1.22
TPM4-201ENST00000300933 SENP6Q9GZR1 1112 aaPredicted RBP22.65■■□□□ 1.22
TPM4-201ENST00000300933 TXLNGQ9NUQ3 528 aa22.65■■□□□ 1.22
TPM4-201ENST00000300933 PAK5Q9P286 719 aa22.65■■□□□ 1.22
TPM4-201ENST00000300933 PADI3Q9ULW8 664 aa22.65■■□□□ 1.22
TPM4-201ENST00000300933 FAM72CH0Y354 149 aa22.65■■□□□ 1.22
TPM4-201ENST00000300933 PEX11AO75192 247 aa22.65■■□□□ 1.22
TPM4-201ENST00000300933 GJA9P57773 515 aa22.65■■□□□ 1.22
TPM4-201ENST00000300933 CACNB2Q08289 660 aaPredicted RBP22.65■■□□□ 1.22
TPM4-201ENST00000300933 SLC25A52Q3SY17 297 aa22.65■■□□□ 1.22
TPM4-201ENST00000300933 TIGD5Q53EQ6 642 aa22.65■■□□□ 1.22
TPM4-201ENST00000300933 FAM72AQ5TYM5 149 aa22.65■■□□□ 1.22
TPM4-201ENST00000300933 SMYD5Q6GMV2 418 aa22.65■■□□□ 1.22
TPM4-201ENST00000300933 FAM72DQ6L9T8 149 aa22.65■■□□□ 1.22
TPM4-201ENST00000300933 FAM72BQ86X60 149 aa22.65■■□□□ 1.22
TPM4-201ENST00000300933 SYT15Q9BQS2 421 aa22.65■■□□□ 1.22
TPM4-201ENST00000300933 ACSS3Q9H6R3 686 aa22.65■■□□□ 1.22
TPM4-201ENST00000300933 TRMT13Q9NUP7 481 aaKnown RBP22.65■■□□□ 1.22
TPM4-201ENST00000300933 SEPT10Q9P0V9 454 aa22.65■■□□□ 1.22
TPM4-201ENST00000300933 TEX264Q9Y6I9 313 aa22.65■■□□□ 1.22
TPM4-201ENST00000300933 GABRDO14764 452 aa22.64■■□□□ 1.21
TPM4-201ENST00000300933 MAP3K13O43283 966 aa22.64■■□□□ 1.21
TPM4-201ENST00000300933 FAM200BP0CF97 657 aa22.64■■□□□ 1.21
TPM4-201ENST00000300933 CRADDP78560 199 aa22.64■■□□□ 1.21
TPM4-201ENST00000300933 SETDB1Q15047 1291 aa22.64■■□□□ 1.21
TPM4-201ENST00000300933 DENND5BQ6ZUT9 1274 aa22.64■■□□□ 1.21
TPM4-201ENST00000300933 EGFL6Q8IUX8 553 aa22.64■■□□□ 1.21
TPM4-201ENST00000300933 CTAGE3PQ8IX95 158 aa22.64■■□□□ 1.21
TPM4-201ENST00000300933 FAM13CQ8NE31 585 aa22.64■■□□□ 1.21
TPM4-201ENST00000300933 LBHD1Q9BQE6 289 aaPredicted RBP22.64■■□□□ 1.21
TPM4-201ENST00000300933 SNX10Q9Y5X0 201 aa22.64■■□□□ 1.21
TPM4-201ENST00000300933 MAD1L1Q9Y6D9 718 aa22.64■■□□□ 1.21
TPM4-201ENST00000300933 I6L893 689 aaPredicted RBP22.64■■□□□ 1.21
TPM4-201ENST00000300933 CAPN9O14815 690 aa22.64■■□□□ 1.21
TPM4-201ENST00000300933 SMIM24O75264 130 aa22.64■■□□□ 1.21
TPM4-201ENST00000300933 B3GAT3O94766 335 aa22.64■■□□□ 1.21
TPM4-201ENST00000300933 FYNP06241 537 aa22.64■■□□□ 1.21
TPM4-201ENST00000300933 YY1P25490 414 aa22.64■■□□□ 1.21
TPM4-201ENST00000300933 RPL34P49207 117 aaKnown RBP22.64■■□□□ 1.21
TPM4-201ENST00000300933 TDRPQ86YL5 185 aa22.64■■□□□ 1.21
TPM4-201ENST00000300933 ZMIZ2Q8NF64 920 aa22.64■■□□□ 1.21
TPM4-201ENST00000300933 TTC8Q8TAM2 541 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms