RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 CLTBP09497 229 aa5.7□□□□□ -1.5
CPSF2-201ENST00000298875 GRK3P35626 688 aa5.7□□□□□ -1.5
CPSF2-201ENST00000298875 RPL5P46777 297 aaKnown RBP5.7□□□□□ -1.5
CPSF2-201ENST00000298875 ANXA11P50995 505 aaKnown RBP5.7□□□□□ -1.5
CPSF2-201ENST00000298875 TYSND1Q2T9J0 566 aa5.7□□□□□ -1.5
CPSF2-201ENST00000298875 EDRF1Q3B7T1 1238 aa5.7□□□□□ -1.5
CPSF2-201ENST00000298875 FAM228AQ86W67 206 aa5.7□□□□□ -1.5
CPSF2-201ENST00000298875 CARNMT1Q8N4J0 409 aa5.7□□□□□ -1.5
CPSF2-201ENST00000298875 SEMA4DQ92854 862 aa5.7□□□□□ -1.5
CPSF2-201ENST00000298875 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.7□□□□□ -1.5
CPSF2-201ENST00000298875 PIK3CDO00329 1044 aa5.7□□□□□ -1.5
CPSF2-201ENST00000298875 SPTLC1O15269 473 aa5.7□□□□□ -1.5
CPSF2-201ENST00000298875 DYRK3O43781 588 aa5.7□□□□□ -1.5
CPSF2-201ENST00000298875 WFS1O76024 890 aa5.7□□□□□ -1.5
CPSF2-201ENST00000298875 TTLL9Q3SXZ7 439 aa5.7□□□□□ -1.5
CPSF2-201ENST00000298875 ZSCAN18Q8TBC5 510 aaPredicted RBP5.7□□□□□ -1.5
CPSF2-201ENST00000298875 CDC42EP4Q9H3Q1 356 aaKnown RBP5.7□□□□□ -1.5
CPSF2-201ENST00000298875 ENTPD7Q9NQZ7 604 aa5.7□□□□□ -1.5
CPSF2-201ENST00000298875 MCUBQ9NWR8 336 aa5.7□□□□□ -1.5
CPSF2-201ENST00000298875 DPP3Q9NY33 737 aa5.7□□□□□ -1.5
CPSF2-201ENST00000298875 SORCS3Q9UPU3 1222 aa5.7□□□□□ -1.5
CPSF2-201ENST00000298875 PON1P27169 355 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 YWHAQP27348 245 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 CELF1Q92879 486 aaKnown RBP5.69□□□□□ -1.5
CPSF2-201ENST00000298875 RXFP1Q9HBX9 757 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 VTI1BQ9UEU0 232 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 PLEKP08567 350 aaPredicted RBP5.69□□□□□ -1.5
CPSF2-201ENST00000298875 FGFR2P21802 821 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 FASP25445 335 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 GRK4P32298 578 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 MAPK10P53779 464 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 IRAK1BP1Q5VVH5 260 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 ZNF544Q6NX49 715 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 ATP6V0D2Q8N8Y2 350 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 CAMKK2Q96RR4 588 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 ZSWIM1Q9BR11 485 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 NFKBIZQ9BYH8 718 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 L2HGDHQ9H9P8 463 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 TECPR2O15040 1411 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 KDM4FA0A1W2PPD8 638 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 GAS2O43903 313 aaKnown RBP5.69□□□□□ -1.5
CPSF2-201ENST00000298875 ATG7O95352 703 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 VCLP18206 1134 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 ZNF438Q7Z4V0 828 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 CDCA5Q96FF9 252 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 MTMR12Q9C0I1 747 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 USP31Q70CQ4 1352 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 LTFP02788 710 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 PCSK1P29120 753 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 SLC1A6P48664 564 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 RPL19P84098 196 aaKnown RBP5.69□□□□□ -1.5
CPSF2-201ENST00000298875 DGUOKQ16854 277 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 TTC27Q6P3X3 843 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 GLB1LQ6UWU2 654 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 PNPLA7Q6ZV29 1317 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 LRRC6Q86X45 466 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 IZUMO1Q8IYV9 350 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 DLG3Q92796 817 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 ZNF521Q96K83 1311 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 OSBPL6Q9BZF3 934 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 KLK14Q9P0G3 267 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 PPP2R3BQ9Y5P8 575 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 DYNC1LI2O43237 492 aaPredicted RBP5.69□□□□□ -1.5
CPSF2-201ENST00000298875 STX11O75558 287 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 ATF6P18850 670 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 GTF2E2P29084 291 aaKnown RBP5.69□□□□□ -1.5
CPSF2-201ENST00000298875 HPCAL1P37235 193 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 STK4Q13043 487 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 IER5Q5VY09 327 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 SLFN11Q7Z7L1 901 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 NT5DC3Q86UY8 548 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 SLC22A9Q8IVM8 553 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 DCP1BQ8IZD4 617 aaKnown RBP5.69□□□□□ -1.5
CPSF2-201ENST00000298875 AAR2Q9Y312 384 aaKnown RBP5.69□□□□□ -1.5
CPSF2-201ENST00000298875 N6AMT1Q9Y5N5 214 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 SDR42E2A6NKP2 422 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 H3BN98 237 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 ASS1P00966 412 aaKnown RBP5.69□□□□□ -1.5
CPSF2-201ENST00000298875 HK2P52789 917 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 CDK20Q8IZL9 346 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 DPF3Q92784 378 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 RFT1Q96AA3 541 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 FICDQ9BVA6 458 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 TMEM106CQ9BVX2 250 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 DDIT4Q9NX09 232 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 ING4Q9UNL4 249 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 TAF4O00268 1085 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 SGPL1O95470 568 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 C6orf222P0C671 652 aaPredicted RBP5.69□□□□□ -1.5
CPSF2-201ENST00000298875 ERP29P30040 261 aaKnown RBP5.69□□□□□ -1.5
CPSF2-201ENST00000298875 ALX1Q15699 326 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 ACAD10Q6JQN1 1059 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 CDC73Q6P1J9 531 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 NOTUMQ6P988 496 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 PRCCQ92733 491 aaPredicted RBP5.69□□□□□ -1.5
CPSF2-201ENST00000298875 VPS33AQ96AX1 596 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 CPB2Q96IY4 423 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 NT5MQ9NPB1 228 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 EHD3Q9NZN3 535 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 SLC2A3P11169 496 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms