RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 COPS7BQ9H9Q2 264 aaPredicted RBP13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 ITGB1BP2Q9UKP3 347 aa13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 CNOT11Q9UKZ1 510 aaKnown RBP13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 TMED5Q9Y3A6 229 aa13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 NPM3O75607 178 aaKnown RBP13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 KRT3P12035 628 aa13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 HOXA10P31260 410 aaPredicted RBP13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 MAGEA3P43357 314 aa13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 HARS2P49590 506 aaKnown RBP13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 MTMR1Q13613 665 aa13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 TAF5Q15542 800 aa13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 PTF1AQ7RTS3 328 aa13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 LDHDQ86WU2 507 aa13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 TSPAN14Q8NG11 270 aa13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 ACMSDQ8TDX5 336 aa13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 CGRRF1Q99675 332 aa13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 KLC2Q9H0B6 622 aa13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 SDCBP2Q9H190 292 aa13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 RSAD1Q9HA92 442 aa13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 VPS28Q9UK41 221 aa13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 PACSIN3Q9UKS6 424 aa13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 PCDHGC3Q9UN70 934 aa13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 HEMK1Q9Y5R4 338 aaPredicted RBP13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 NR2E3Q9Y5X4 410 aa13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 STYXL1Q9Y6J8 313 aa13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 SQORQ9Y6N5 450 aa13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 TRPA1O75762 1119 aa13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 CAPN15O75808 1086 aa13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 CCNE2O96020 404 aa13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 PRKCGP05129 697 aa13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 ACADVLP49748 655 aa13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 LIG4P49917 911 aa13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 MRPS9P82933 396 aaKnown RBP13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 FLOT2Q14254 428 aa13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 PDK1Q15118 436 aa13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 ZNF423Q2M1K9 1284 aa13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 LPCAT2Q7L5N7 544 aa13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 CSRNP1Q96S65 589 aa13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 PKP2Q99959 881 aa13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 LIN28AQ9H9Z2 209 aaKnown RBP13.9□□□□□ -0.18
RPUSD4-201ENST00000298317 GPR25O00155 361 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 PSMC3P17980 439 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 STT3AP46977 705 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 NUMBP49757 651 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 JAK3P52333 1124 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 THOP1P52888 689 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 ABCE1P61221 599 aaKnown RBP13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 PTPN20Q4JDL3 420 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 PIGGQ5H8A4 983 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 FAM182AQ5T1J6 154 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 C10orf107Q8IVU9 208 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 LZTR1Q8N653 840 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 OR5B17Q8NGF7 314 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 NLRP7Q8WX94 980 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 DLG3Q92796 817 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 TMIGD2Q96BF3 282 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 CCT7Q99832 543 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 CALN1Q9BXU9 219 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 OSBPL6Q9BZF3 934 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 RRN3Q9NYV6 651 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 RBAKQ9NYW8 714 aaPredicted RBP13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 AGO2Q9UKV8 859 aaKnown RBP13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 RNF11Q9Y3C5 154 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 ZNF711Q9Y462 761 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 WDR64B1ANS9 1081 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 CBFA2T3O75081 653 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 ALDOAP04075 364 aaKnown RBP13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 XRCC1P18887 633 aaPredicted RBP13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 ENTPD1P49961 510 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 TXNL4AP83876 142 aaKnown RBP13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 PFKPQ01813 784 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 PDE1CQ14123 709 aaPredicted RBP13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 FAXCQ5TGI0 409 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 SCARA3Q6AZY7 606 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 ELMSAN1Q6PJG2 1045 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 EPGNQ6UW88 154 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 C16orf89Q6UX73 402 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 ZNF534Q76KX8 674 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 TMEM102Q8N9M5 508 aaPredicted RBP13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 MCUQ8NE86 351 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 ACER1Q8TDN7 264 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 TRPC4APQ8TEL6 797 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 CHURC1Q8WUH1 139 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 DEPDC1BQ8WUY9 529 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 HSPH1Q92598 858 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 ABHD8Q96I13 439 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 SIGLEC10Q96LC7 697 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 RANBP9Q96S59 729 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 HAPLN2Q9GZV7 340 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 CYP26B1Q9NR63 512 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 PCSK1NQ9UHG2 260 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 TMX2Q9Y320 296 aa13.89□□□□□ -0.19
RPUSD4-201ENST00000298317 AHDC1Q5TGY3 1603 aaPredicted RBP13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 ENDOD1O94919 500 aa13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 CCDC130P13994 396 aa13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 MIPP30301 263 aa13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 NUDT2P50583 147 aa13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 GALNT4Q8N4A0 578 aa13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 TFAP2BQ92481 460 aa13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 LENG8Q96PV6 779 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms